ID:

eca-mir-9007

 Coordinate:

chr8:4099937-4100067 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-59.0 -59.0 -59.0 -58.9

Sense Strand Reads

GTCCATGGGCCCCTCTCTGTCCATGCCCGTGCCGTCTCTTCCTTAGGATCCAGGGGGTCCTCCCGGCTCTGAGGGGTGGGGGATGGTTCATGCTGCCTTTCTGGAAGTCGGTCTGTAACGTGCTTCCAGAGCCTTAGTCAGGCACAACCTTTGATCCCTTCCAAACGTCAGCGGTGGGACCCATGCACAGGTATGGAGGCCAGGGCGGTGGCTGTGTCCTGTGGTGGGACT

***********************************((...((............(((((((.(((...((((....(((((((((((...((.(((((((((((((((((........)).))))))))))........))))))))))....)))))..)))....))))))).))))))).......))...))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................TTCTGGAAGTTGGTCTGTAACGTGCTTC......................................................................................................... 28 1 1 3.00 3 3
......................................................................................................................................TAGTCAGGCACAACCTTTGATCCCTTCCAAAC................................................................. 32 0 1 2.00 2 2
............................................................................................................TGGTCTGTAACGTGCTTCCAGAGCCT................................................................................................. 26 1 1 2.00 2 2
..............................................................................................................................................................TTCCAAACGTCAGTGGTGGGACCGATGCAT........................................... 30 3 1 1.00 1 1
.....................................................................................................TGGAAGTTGGTCTGTAACGTGCTTCCAGAGCCT................................................................................................. 33 1 1 1.00 1 1
..............................................................................................................................................................TTCCAAACGTCAGTGGTGGGACCCATGCATT.......................................... 31 3 1 1.00 1 1
..........................................................................................TGCTGCCTTTCTGGAAGTTGGTCT..................................................................................................................... 24 1 2 0.50 1 1
..........................................................................................TGCTGCCTTTCTGGAAGTTGGTCTGTAAC................................................................................................................ 29 1 2 0.50 1 1

Anti-sense strand reads

CAGGTACCCGGGGAGAGACAGGTACGGGCACGGCAGAGAAGGAATCCTAGGTCCCCCAGGAGGGCCGAGACTCCCCACCCCCTACCAAGTACGACGGAAAGACCTTCAGCCAGACATTGCACGAAGGTCTCGGAATCAGTCCGTGTTGGAAACTAGGGAAGGTTTGCAGTCGCCACCCTGGGTACGTGTCCATACCTCCGGTCCCGCCACCGACACAGGACACCACCCTGA

***********************************((...((............(((((((.(((...((((....(((((((((((...((.(((((((((((((((((........)).))))))))))........))))))))))....)))))..)))....))))))).))))))).......))...))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:08 PM