ID:eca-mir-9001 |
Coordinate:chr7:78288029-78288153 - |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -44.6 | -43.9 | -43.9 |
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CTAACGTAAACGGAGCTACTTGTGTGCCAGGTGCTTTCCATATATCGTCTCCCGAGCGGTAACCCAGGAGCGGAGGCGAAGAGATCTCGCAGGCGGCCGGCTGTGAGGATTGACAGCTGGCTTTCTGGAAAATCGCAGCCCCGGCTCCTTCGACCCCTCCCCCATTTCCTGAGCCGAGGGGgggGGGgGGggGTGGtGgGGGGGggGGGtGGgGgGGtgggGGtG
*****************************************************************((((((((.(((...((....((.((((.((((((((((........)))))))))).))))))...))...))))).))))))..************************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR871532 testes |
|---|---|---|---|---|---|---|
| ...............................TGCTTTCCATATATCGTCTCCCGAGC........................................................................................................................................................................ | 26 | 0 | 1 | 10.00 | 10 | 10 |
| ..............................................................................................................TGACAGCTGGCTTTCTGGAAAATCGC......................................................................................... | 26 | 0 | 1 | 5.00 | 5 | 5 |
| ................................................................................GAGATCTCGCAGGCGGCCGGCTGTA........................................................................................................................ | 25 | 1 | 1 | 5.00 | 5 | 5 |
| ...................................TTCCATATATCGTCTCCCGAGCGGT..................................................................................................................................................................... | 25 | 0 | 1 | 4.00 | 4 | 4 |
| .........................................................................................................................TTTCTGGAAAATCGCAGCCCCGGCTCC............................................................................. | 27 | 0 | 1 | 4.00 | 4 | 4 |
| .......................................................................................................TGAGGATTGACAGCTGGCTTTCTGGAAAATC........................................................................................... | 31 | 0 | 1 | 3.00 | 3 | 3 |
| ..............................GTGCTTTCCATATATCGTCTCCCGAGC........................................................................................................................................................................ | 27 | 0 | 1 | 3.00 | 3 | 3 |
| ...................................TTCCATATATCGTCTCCCGAGCGG...................................................................................................................................................................... | 24 | 0 | 1 | 3.00 | 3 | 3 |
| .....................................................................................................TGTGAGGATTGACAGCTGGCTTTCTGT................................................................................................. | 27 | 1 | 1 | 3.00 | 3 | 3 |
| ................................................................................GAGATCTCGCAGGCGGCCGGCTGT......................................................................................................................... | 24 | 0 | 1 | 3.00 | 3 | 3 |
| ........................................TATATCGTCTCCCGAGCGGTAACCCAGGAGT.......................................................................................................................................................... | 31 | 1 | 1 | 2.00 | 2 | 2 |
| .....................................................................................................TGTGAGGATTGACAGCTGGCTTTCTGGA................................................................................................ | 28 | 0 | 1 | 2.00 | 2 | 2 |
| ...................................TTCCATATATCGTCTCCCGAGC........................................................................................................................................................................ | 22 | 0 | 1 | 2.00 | 2 | 2 |
| ..........................................................................................................................TTCTGGAAAATCGCAGCCCCGGCTCC............................................................................. | 26 | 0 | 1 | 2.00 | 2 | 2 |
| .......................................ATATATCGTCTCCCGAGCGGTAACCCAGGA............................................................................................................................................................ | 30 | 0 | 1 | 1.00 | 1 | 1 |
| ...........................................................TAACCCAGGAGCGGAGGCGAAGAGATC........................................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 |
| ...........................................................................................................................TCTGGAAAATCGCAGCCCCGGCTCCTTC.......................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 |
| ................................................................................GAGATCTCGCAGGCGGCCGGCTGTT........................................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 |
| .............................TGTGCTTTCCAGATATCGTCTCCCGAGC........................................................................................................................................................................ | 28 | 2 | 1 | 1.00 | 1 | 1 |
| ...........................................................................................................................TCTGGAAAATCGCAGCCCCGGCTCC............................................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 |
| .......................................................................................................TGAGGATTGACAGCTGGCTTTCTGGA................................................................................................ | 26 | 0 | 1 | 1.00 | 1 | 1 |
| .......................................................................................................TGAGGATTGACAGCTGGCTTTCTGGAAAA............................................................................................. | 29 | 0 | 1 | 1.00 | 1 | 1 |
| .....................................................................................................................................................................TTCCTGAGCCGAGGGGCCCGGGCGGCCTT............................... | 29 | 1 | 1 | 1.00 | 1 | 1 |
| .....................................................................................................TGTGAGGATTGACAGCTGGCTTTCTGGTA............................................................................................... | 29 | 1 | 1 | 1.00 | 1 | 1 |
| ......................TGTGCCAGGTGCTTTCCATATATCGT................................................................................................................................................................................. | 26 | 0 | 1 | 1.00 | 1 | 1 |
| ................................................................................GAGATCTCGCAGGCGGCCGGCTGTGT....................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 |
| ...............................TGCTTTCCATATATCGTCTCCGGAGC........................................................................................................................................................................ | 26 | 1 | 1 | 1.00 | 1 | 1 |
| ........................................TATATCGTCTCCCGAGCGGTAACCCAGGA............................................................................................................................................................ | 29 | 0 | 1 | 1.00 | 1 | 1 |
| ..............................................................................................................TGACAGCTGGCGTTCTGGAAAATCGC......................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 |
| ...........................................................TAACCCAGGAGCGGGGGCGAAGAGATCTC......................................................................................................................................... | 29 | 1 | 1 | 1.00 | 1 | 1 |
| ............................CGGTGCTTTCCATATATCGTCTCCC............................................................................................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 |
| ......................TGTGCCAGGTGCTTTCCATATATCGTC................................................................................................................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 1 |
| ................................................................................GAGATCTCGCAGGCGGCCGGCTGA......................................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 |
| ..................................TTTCCATATATCGTCTCCCGAGCGGTAAC.................................................................................................................................................................. | 29 | 0 | 1 | 1.00 | 1 | 1 |
| .............................AGTGCTTTCCATATATCGTCTCCCGAGC........................................................................................................................................................................ | 28 | 1 | 1 | 1.00 | 1 | 1 |
| ................................................................CAGGAGCGGAGGCGAAGAGATCTCGCAACC................................................................................................................................... | 30 | 2 | 1 | 1.00 | 1 | 1 |
| .....................................CCATATATCGTCTCCCGAGCGGTAA................................................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 |
| ...................................TTCCATATATCGTCTCCCGAGCGT...................................................................................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 |
| .............................................................................................................TTGACAGCTGGCTTTCTGGAAAATCGC......................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 |
| ....................................TCCATATATCGTCTCCCGAGCGGTA.................................................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 |
| .....................................................................................................TGTGAGGATTGACAGCTGGCTTTC.................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 |
| ................................................................................GAGATCTCGCAGGCGGCCGGCTGTGA....................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 |
| .............................TGTGCTTTCCATATATCGTCTCCCGAGC........................................................................................................................................................................ | 28 | 1 | 1 | 1.00 | 1 | 1 |
| ...................................TTCCATATATCGTCTCCCGAGCGGTA.................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 |
| ....................................TCCATATATCGTCTCCCGACCG....................................................................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 |
| ...............................TGCTTTCCACATATCGTCTCCCGAGC........................................................................................................................................................................ | 26 | 1 | 1 | 1.00 | 1 | 1 |
| ..................................TTTCCATATATCGTCTCCCGAGCGGA..................................................................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 |
| .....................................................................................................TGTGAGGATTGACAGCTGGCTTTCTGGAAAT............................................................................................. | 31 | 1 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................GAGGATTGACAGCTGGCTTTCTGGA................................................................................................ | 25 | 0 | 1 | 1.00 | 1 | 1 |
| .................................................................................AGATCTCGCAGGCGGCCGGCTGTG........................................................................................................................ | 24 | 0 | 1 | 1.00 | 1 | 1 |
| ..................................TTTCCATATATCGTCTCCCGAGCGGT..................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 |
| .......................................................................................................TGAGGATTGACAGCTGGCTTTCTGGAAAAT............................................................................................ | 30 | 0 | 1 | 1.00 | 1 | 1 |
| ..................................TTTCCATATGTCGTCTCCCGAGCGGT..................................................................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 |
| ...........................TGAGTGCTTTCCATATATCGTCTCCC............................................................................................................................................................................ | 26 | 3 | 2 | 0.50 | 1 | 1 |
|
GATTGCATTTGCCTCGATGAACACACGGTCCACGAAAGGTATATAGCAGAGGGCTCGCCATTGGGTCCTCGCCTCCGCTTCTCTAGAGCGTCCGCCGGCCGACACTCCTAACTGTCGACCGAAAGACCTTTTAGCGTCGGGGCCGAGGAAGCTGGGGAGGGGGTAAAGGACTCGGCTCCCCgggCCCgCCggCACCtCgCCCCCggCCCtCCgCgCCtgggCCtC
**************************************************************************((((((((.(((...((....((.((((.((((((((((........)))))))))).))))))...))...))))).))))))..***************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR871532 testes |
|---|---|---|---|---|---|---|
| .......................................................................................................ACTCCTAACTGTCGACCGAAAGACCTTTT............................................................................................. | 29 | 0 | 1 | 1.00 | 1 | 1 |
Generated: 09/01/2015 at 12:07 PM