ID:

eca-mir-8995

 Coordinate:

chr7:93519912-93520052 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CAAATTTTCCTCTGCAGGAAGATGTCTGAGGTGCCTCTGTGGTGTGTGTAAGTTAAAGCAGCCACGATGAAGAAGTCTAAGCTTTGTGGTGGTGACGTATTCCTGTTGACATGCTGTCTCTCATTGTATGTGTGTGTCATCAGGGCTACGGTCCGTCACAGAGCGATAGATGGACTGTCTGAGCTCACCCCCAAATGCCTATGACTTAGGTTACCAATGTATTCTTTCTCGTTGGGGGGTT

******************************************************************************..((((((((((((...((((.(((((.((((((((.................)))))))).))))).))))..)))))))))))).......********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.....................................................................................................................................GTGTCATCAGGGCTACGGTCCGT..................................................................................... 23 0 1 10.00 10 10
.....................................................................................................................................GTGTCATCAGGGCTACGGTCT....................................................................................... 21 1 1 10.00 10 10
.............................................................................................GACGTATTCCTGTTGACATG................................................................................................................................ 20 0 1 4.00 4 4
.............................................................................................GACGTATTCCTGTTGACATGC............................................................................................................................... 21 0 1 2.00 2 2
...................................................................................................................................................................CGATAGATGGACTGTCTGAGCTCACCCCC................................................. 29 0 1 2.00 2 2
.............................................................................................GACGTATTCCTGTTGACATGCT.............................................................................................................................. 22 0 1 1.00 1 1
.....................................................................................................................................GTGTCATCAGGGCTACGGTGCGT..................................................................................... 23 1 1 1.00 1 1
..............................................................................................ACGTATTCCTGTTGACATGCTT............................................................................................................................. 22 1 1 1.00 1 1
....................................................................................................................................TGTGTCATCAGGGCTACGGTCT....................................................................................... 22 1 1 1.00 1 1
......................................................................................................................................TGTCATCAGGGCTACGGTCCGT..................................................................................... 22 0 1 1.00 1 1
............................................................................................TGACGTATTCCTGTTGACATG................................................................................................................................ 21 0 1 1.00 1 1
.....................................................................................................................................GTGTCATCAGGGCTACGGTCCGTT.................................................................................... 24 1 1 1.00 1 1
..........................................................................................GGTGACGTATTCCTGTTGACATG................................................................................................................................ 23 0 1 1.00 1 1
.....................................................................................................................................GTGTCATCAGGGCTACGGTTT....................................................................................... 21 2 2 0.50 1 1
....................................................................................................................................TGTGTCATCAGGGCTACGGTCTTTT.................................................................................... 25 3 2 0.50 1 1

Anti-sense strand reads

GTTTAAAAGGAGACGTCCTTCTACAGACTCCACGGAGACACCACACACATTCAATTTCGTCGGTGCTACTTCTTCAGATTCGAAACACCACCACTGCATAAGGACAACTGTACGACAGAGAGTAACATACACACACAGTAGTCCCGATGCCAGGCAGTGTCTCGCTATCTACCTGACAGACTCGAGTGGGGGTTTACGGATACTGAATCCAATGGTTACATAAGAAAGAGCAACCCCCCAA

**********************************************************************..((((((((((((...((((.(((((.((((((((.................)))))))).))))).))))..)))))))))))).......****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:07 PM