ID:

eca-mir-8990

 Coordinate:

chr7:98037125-98037269 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

GTtggGgTGGGtGGGTggTTTGtggggtGgTGGTGtGgttgggTGtGgtGGTGtGggGGGTGGgTGGGggttGGGGgTGGGTGgTGGGtGTGTGgTTTgTGtgTGGGTGGgtgGTGGggTGGGGgTGTGGTGTTGtgTTTGGGtGGGggggGGtttggGTgGTggtGGGTGgtGtTttGggTTGGTGgGgtGGgGGTGTGgtGGGgtgTTtGGGtGggTGttGGGGtGGggGgtGTGtGGTGGTg

********************************************************************************..................................................................................................******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.....................................................................................................................................TGACTTTGGGAGGGCCCCGGAAACCGTCGT.................................................................................. 30 0 1 1.00 1 1
..................TTTGACCCCAGCTGGTGAGCAACCCT......................................................................................................................................................................................................... 26 0 1 1.00 1 1
............................................................................................TGCTTTCTGACTGGGTGGCACGTGGCCTT............................................................................................................................ 29 1 1 1.00 1 1
..................................................................................................................................TGTTGACTTTGGGAGGGCCCCGGAAACCGTC.................................................................................... 31 0 1 1.00 1 1
..................TTTGACCCCAGCTGGTGAGCAACCCTGAGCTTT.................................................................................................................................................................................................. 33 3 1 1.00 1 1
......................................................................................................................................................................................................TGCAGGGCACTTAGGGAGCCTGAAGGGGAA................. 30 1 1 1.00 1 1
...............................................................................................TTTCTGACTGGGTGGCACGTGGCCTG............................................................................................................................ 26 0 1 1.00 1 1
...............................................................................................................................TGGTGTTGACTTTGGGAGGGCCCCGGAT.......................................................................................... 28 1 1 1.00 1 1
.........................................................................................................................................................AAACCGTCGTCCAGGGTGCAGATAAGCCTT.............................................................. 30 0 1 1.00 1 1
............................................................................................TGCTTTCTGACTGGGTGGCACGTGGCCTGTAA......................................................................................................................... 32 3 1 1.00 1 1
...............................................................................................TTTCTGACTGGGTGGCACGTGGCCTGGGGC........................................................................................................................ 30 0 1 1.00 1 1
....................................................................................TGGGAGTGTGCTTTCTGACTGGGTGG....................................................................................................................................... 26 0 1 1.00 1 1
..................TTTGACCCCAGCTGGTGAGCAACCCTGA....................................................................................................................................................................................................... 28 0 1 1.00 1 1
..................................................................................................................................TGTTGACTTTGGGAGGGCCCCGGA........................................................................................... 24 0 1 1.00 1 1

Anti-sense strand reads

CAtggCgACCCtCCCAggAAACtggggtCgACCACtCgttgggACtCgtCCACtCggCCCACCgACCCggttCCCCgACCCACgACCCtCACACgAAAgACtgACCCACCgtgCACCggACCCCgACACCACAACtgAAACCCtCCCggggCCtttggCAgCAggtCCCACgtCtAttCggAACCACgCgtCCgCCACACgtCCCgtgAAtCCCtCggACttCCCCtCCggCgtCACtCCACCAg

*******************************************************************..................................................................................................******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:07 PM