ID:

eca-mir-8987

 Coordinate:

chr7:2814101-2814203 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-54.8 -54.4 -54.4

Sense Strand Reads

TCGTCCAGCACCTCGCTGCTCGCGTCGTCCAGGAACGCGACCGCCACCGCCCGCGAGGCCACCTTGCCCAGCAGCTTCTTCTGCGCCTGCAGGGCCAGGCTCTTGGTGCTGAAGGCGTCCATCGGGCCTGCGGGAGGAAAGACACACGCCCGTCAGGCCCCGCCGCCACCGCTGGTGGCTCCCGCCGCGTCCCCGGTCCGTGT

***********************************((((..((....))..)))).(((......)))..((.((.......((((((.(((.(((((....))))).))).)))))).....(((((((((((..............)))).))))))).)).))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................CCCAGCAGCTTCTTCTGCGCCTGCAGG.............................................................................................................. 27 0 1 1.00 1 1
.............................................................................................................TGAAGGCGTCCATCGGGCCTGCGGATT................................................................... 27 3 1 1.00 1 1
...................TCCCGTCGTCCATGGACGCG.................................................................................................................................................................... 20 3 12 0.08 1 1

Anti-sense strand reads

AGCAGGTCGTGGAGCGACGAGCGCAGCAGGTCCTTGCGCTGGCGGTGGCGGGCGCTCCGGTGGAACGGGTCGTCGAAGAAGACGCGGACGTCCCGGTCCGAGAACCACGACTTCCGCAGGTAGCCCGGACGCCCTCCTTTCTGTGTGCGGGCAGTCCGGGGCGGCGGTGGCGACCACCGAGGGCGGCGCAGGGGCCAGGCACA

***********************************((((..((....))..)))).(((......)))..((.((.......((((((.(((.(((((....))))).))).)))))).....(((((((((((..............)))).))))))).)).))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...................................GCGCTGGCGCTGGCGTGCGCGC.................................................................................................................................................. 22 3 2 1.00 2 2
.....................................GCTGGCGCTGGCGTGCGCGC.................................................................................................................................................. 20 3 16 0.06 1 1
......................................CTGGCGCTGGCGTGCGC.................................................................................................................................................... 17 2 20 0.05 1 1
....................................CGCTGGCGCTGGCGTGCGCG................................................................................................................................................... 20 3 20 0.05 1 1

Generated: 09/01/2015 at 12:05 PM