ID:

eca-mir-8981

 Coordinate:

chr6:71178391-71178493 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-38.9 -38.6 -38.6 -38.3

Sense Strand Reads

GGTGGCCTCACCCTAGCCCCTCTTTGAGTCACTGGGAGGTAGGGAGGACAGACAGTGGGGACTTTATTGAGAGGAGCTGGGGTGGAAGTGGGGGGTGACAGGATGGAAATTTTGCATCGCTGTGCTTGGTCCCAGGACTTACCTCAGAGGAGGGTGGGGTGGGGGATGAGGAAGGAGAGGAAAGCAGAGGAGAGTTCTGGGAA

***********************************.............((..((.......((((.(((((.((..((((((...((((.((.((((.((((((....)))))))))).))..))))..))))))..))...))))).)))).......)).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.............................................................................................................TTTTGCATCGCTGTGCTTGGTCCC...................................................................... 24 0 1 2.00 2 2
.............................................................................................................TTTTGCATCGCTGTGCTTGGTCCT...................................................................... 24 1 1 1.00 1 1
.............................................................................................................TTTTGCATCGCTGTGCTTGGTCC....................................................................... 23 0 1 1.00 1 1
..............................................................................................................TTTGCATCGCTGTGCTTGGTCC....................................................................... 22 0 1 1.00 1 1

Anti-sense strand reads

CCACCGGAGTGGGATCGGGGAGAAACTCAGTGACCCTCCATCCCTCCTGTCTGTCACCCCTGAAATAACTCTCCTCGACCCCACCTTCACCCCCCACTGTCCTACCTTTAAAACGTAGCGACACGAACCAGGGTCCTGAATGGAGTCTCCTCCCACCCCACCCCCTACTCCTTCCTCTCCTTTCGTCTCCTCTCAAGACCCTT

***********************************.............((..((.......((((.(((((.((..((((((...((((.((.((((.((((((....)))))))))).))..))))..))))))..))...))))).)))).......)).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:05 PM