ID:

eca-mir-8975

 Coordinate:

chr6:26987484-26987628 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

CTGCAAGATGGGGGTAGGGCCCCCACCTCAGAGGTGAGAACCCAGCACGCTTGGTGCTCAGGGCTTGGGTCCTCCTGTCCCTGGGGCTTCTCCAGAGCGGCGGAGACTGTGACTGGGCAGGGCCTGGCTGCCTTCTCGGCCTCTTCTCTCTGGTCAGCTGCCCTTCCTGGGAGGCCCCACAGTGGCAGCTCCCTGCTGCAGGGTCGCCCACCCCGTGTTTGTGTGCTGGCACGGAGGAGCCCTCC

***********************************.....((((((((.....)))))..)))..(((((..((((((..((((((...))))))(((((.((((.((((.((((((.((((((((((((((.....)))...........))))))..))))).))((((....)))))))).)))))))))))))))))))..)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................TCCAGAGCGGCGGAGACTGTGACTGGGT............................................................................................................................... 28 1 1 1.00 1 1
...........................TCAGAGGTGAGAACCCAGCACGCTTGG............................................................................................................................................................................................... 27 0 1 1.00 1 1

Anti-sense strand reads

GACGTTCTACCCCCATCCCGGGGGTGGAGTCTCCACTCTTGGGTCGTGCGAACCACGAGTCCCGAACCCAGGAGGACAGGGACCCCGAAGAGGTCTCGCCGCCTCTGACACTGACCCGTCCCGGACCGACGGAAGAGCCGGAGAAGAGAGACCAGTCGACGGGAAGGACCCTCCGGGGTGTCACCGTCGAGGGACGACGTCCCAGCGGGTGGGGCACAAACACACGACCGTGCCTCCTCGGGAGG

***********************************.....((((((((.....)))))..)))..(((((..((((((..((((((...))))))(((((.((((.((((.((((((.((((((((((((((.....)))...........))))))..))))).))((((....)))))))).)))))))))))))))))))..)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:05 PM