ID:

eca-mir-8973

Coordinate:

chr6:73793327-73793447 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-28.8 -28.5 -28.4

Sense Strand Reads

TCTCTCCCATAGGTGAATTTGTTGCCCAGTTTAAATTTACAGTTCTGCTCATGCCCAATGGCCCCATGCGGATAACCAGTGGTCCCTTTGAGCCTGACCTTTACAAGTCTGAGATGGAGGTCCAGGACGCAGAGCTCAAGGTTAGTGTGGGATGAAAGTGGTGAGCAAGTGGCATCTATCCTGGGAGTGAGGACTGAATGTCAGCCAAGTCCTGAAAAGAG

*****************************************************.........(((((((...(((((..(((...(((((..(((((((((((...........)))))))).)))...))))).))).))))))))))))....******************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
....................................................................CGGATAACCAGTGGTCCCTTTGAGCCTGACCTT........................................................................................................................ 33 0 1 1.00 1 1
.........................CCAGTTTAAATTTACAGTTCTGCTCAT......................................................................................................................................................................... 27 0 1 1.00 1 1
..........................................................................................................................CAGGACGCAGAGCTCAAG................................................................................. 18 0 1 1.00 1 1
..........................................................................ACCAGTGGTCCCTTTGAGCCTGACCT......................................................................................................................... 26 0 1 1.00 1 1

Anti-sense strand reads

AGAGAGGGTATCCACTTAAACAACGGGTCAAATTTAAATGTCAAGACGAGTACGGGTTACCGGGGTACGCCTATTGGTCACCAGGGAAACTCGGACTGGAAATGTTCAGACTCTACCTCCAGGTCCTGCGTCTCGAGTTCCAATCACACCCTACTTTCACCACTCGTTCACCGTAGATAGGACCCTCACTCCTGACTTACAGTCGGTTCAGGACTTTTCTC

******************************************************************.........(((((((...(((((..(((...(((((..(((((((((((...........)))))))).)))...))))).))).))))))))))))....*****************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................................................................................................................................................CTGACTTACAGTCGGTTCAGGACTTT.... 26 0 1 1.00 1 1

Generated: 09/01/2015 at 12:05 PM