ID:

eca-mir-8970

 Coordinate:

chr5:51512258-51512392 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-95.4 -95.1 -95.0

Sense Strand Reads

GCCCCTCGCTCCCCGGGGAGGGCAGGCTTAGGGGgtGGGGgtGGGGgGGGGGgGGgGGGgGGtGGgGTGGCCAGGCAGTATAAGAACGGAGGGGGCGGCGGCGCTACGGCTCATTCGGTGCAGCTGCCTGGGGGCTGTAGTGTCCGCGCCGCTCCTGCTGGGGGCTGCCCACGCCAAAGACCTGCCTCCGTCGTCTCCTCTTCCGCCGCCCAGGTGAGTCCACAGCCCCCTCCTC

***********************************..((((.((.((.(((((.(((...((((((((((((...(((((.......((((((.((((..((((((((((((..((((.((....)))))))))))))))))))))).)).)))))))))..)))))))).)))).....))).))))).)).)).))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.............................................................................................................................GCCTGGGGGCTGTAGTGTCCGCGCC..................................................................................... 25 0 1 3.00 3 3
.............................................................................................................................GCCTGGGGGCTGTAGTGTCCGC........................................................................................ 22 0 1 2.00 2 2
...................................................................................................................................GGGCTGTAGTGTCCGCGCC..................................................................................... 19 0 1 1.00 1 1
.................................................................................................................................GGGGGCTGTAGTGTCCGCGCC..................................................................................... 21 0 1 1.00 1 1

Anti-sense strand reads

CGGGGAGCGAGGGGCCCCTCCCGTCCGAATCCCCgtCCCCgtCCCCgCCCCCgCCgCCCgCCtCCgCACCGGTCCGTCATATTCTTGCCTCCCCCGCCGCCGCGATGCCGAGTAAGCCACGTCGACGGACCCCCGACATCACAGGCGCGGCGAGGACGACCCCCGACGGGTGCGGTTTCTGGACGGAGGCAGCAGAGGAGAAGGCGGCGGGTCCACTCAGGTGTCGGGGGAGGAG

***********************************..((((.((.((.(((((.(((...((((((((((((...(((((.......((((((.((((..((((((((((((..((((.((....)))))))))))))))))))))).)).)))))))))..)))))))).)))).....))).))))).)).)).))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:04 PM