ID:

eca-mir-8968

 Coordinate:

chr22:23667980-23668124 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.0

Sense Strand Reads

GAAGAGGGGCAATTTCTGAAGATGGGAGGTTGTGCAGGTGAGGGCTGAGGGCTGGGGCTTCGGGACCCTCCTCATCCCAGGATGATGAACCTGtgccagctgtgtgaccctggggaagttactcagcctctctgggtcttagGATGACGGCACTCACCTCCTCCATGGTTGTGAGGAGAGTTCTGCTCTCCTTGGCGCTGTGCTGCCTTTGGGGTGTGGGGAGTGGAGAGGCTGCCCTGGAGGTG

*****************************************************..(((..((((....((.(((((....))))).)).)))).))).(((((..(((((.(((((.(((....))).))))))))))........))))).(((((..((.....))..)))))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
....................................................................TCCTCATCCCAGGATGATGAACCTGTGCC.................................................................................................................................................... 29 0 1 12.00 12 12
..................................................................................................................................TCTGGGTCTTAGGATGACGGCACTCACCTC..................................................................................... 30 0 1 2.00 2 2
..................................................................................TGATGAACCTGTGCCAGCTGTGTGACA........................................................................................................................................ 27 1 1 1.00 1 1
......................................................................................................................................GGTCTTAGGATGACGGCACTCACCTCC.................................................................................... 27 0 1 1.00 1 1
..........................................................................................................................................TTAGGATGACGGCACTCACCTCCTCCATGGAT........................................................................... 32 1 1 1.00 1 1
.................................................................................................................................................................TCCATGGTTGTGAGGAGAGTTCTGCTCTCCTTT................................................... 33 1 1 1.00 1 1
....................................................................TCCTCATCCCAGGATGATGAACCTGTGCCT................................................................................................................................................... 30 1 1 1.00 1 1
....................................................................TCCTCATCCCAGGATGATGAACCGGTGCCA................................................................................................................................................... 30 1 1 1.00 1 1

Anti-sense strand reads

CTTCTCCCCGTTAAAGACTTCTACCCTCCAACACGTCCACTCCCGACTCCCGACCCCGAAGCCCTGGGAGGAGTAGGGTCCTACTACTTGGACtgGGTgGtgtgtgTGGGtggggTTgttTGtGTgGGtGtGtgggtGttTgCTACTGCCGTGAGTGGAGGAGGTACCAACACTCCTCTCAAGACGAGAGGAACCGCGACACGACGGAAACCCCACACCCCTCACCTCTCCGACGGGACCTCCAC

**********************************************************************..(((..((((....((.(((((....))))).)).)))).))).(((((..(((((.(((((.(((....))).))))))))))........))))).(((((..((.....))..)))))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:50 AM