ID:

eca-mir-8967

 Coordinate:

chr22:38650318-38650428 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.4 -35.2 -34.8

Sense Strand Reads

ATAAACGGAAAAAAGACAGCAATGTTAGGAGAACAATGGAGAATTTTAAAAAGTTAACATATCAGCACAAAGATACCTGGAAGAAACGTTAAGACCCTTGACAATCCTTGGGGATAGTCAGGGGGAGCTGAGTTTCTCACTGGGGTCTGGGCCTTGGTTTAAATATTATTAAAGCAAGGGGTACCCCATGAGAAGTCTGGAAGATGTGGGC

**********************************************************..((((((....((((.(((((.((((((.......((((((((.((((....)))).)))))))).......))))))..)))))))))..))..))))...............************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.........................................................................TACCTGGAAGAAACGTTAAGACCCTTGACA............................................................................................................ 30 0 1 23.00 23 23
.........................................................................TACCTGGAAGAAACGTTAAGACCCTTGA.............................................................................................................. 28 0 1 4.00 4 4
.........................................................................TACCTGGAAGAAACGTTAAGACCCT................................................................................................................. 25 0 1 3.00 3 3
.TAAACGGAAAAAAGACAGCAATGTTAGGAGA................................................................................................................................................................................... 31 0 1 3.00 3 3
.........................................................................TACCTGGAAGAAACGTTAAGACCCTTGACAA........................................................................................................... 31 0 1 3.00 3 3
......................TGTTAGGAGAACAATGGAGAATTTTAAAAAGT............................................................................................................................................................. 32 0 1 2.00 2 2
.........................................................................TACCTGGAAGAAACGTTAAGACCCTTGACT............................................................................................................ 30 1 1 2.00 2 2
.........................................................................TACCTGGAAGAAACGTTAAGACCCTTGAC............................................................................................................. 29 0 1 2.00 2 2
......................................................................AGATACCTGGAAGAAACGTTAAGACCCTTGA.............................................................................................................. 31 0 1 2.00 2 2
.........................................................................TACCTGGAAGAAACGTTAAGACCGTT................................................................................................................ 26 1 1 1.00 1 1
..........................................................................ACCTGGAAGAAACGTTAAGACCCTTGACA............................................................................................................ 29 0 1 1.00 1 1
........................TTAGGAGAACAATGGAGAATTTTAAAAAGT............................................................................................................................................................. 30 0 1 1.00 1 1
.........................TAGGAGAACAATGGAGAATTTTAAAAAGTT............................................................................................................................................................ 30 0 1 1.00 1 1
..................GCAATGTTAGGAGAACAATGGAGAATTT..................................................................................................................................................................... 28 0 1 1.00 1 1
.........................................................................TACCTGGAAGAAACGTTAAGACCCTT................................................................................................................ 26 0 1 1.00 1 1
......................TGTTAGGAGAACAATGGAGAATTTTAAAAAGTT............................................................................................................................................................ 33 0 1 1.00 1 1
........................................................................ATACCTGGAAGAAACGTTAAGACCCTTGAC............................................................................................................. 30 0 1 1.00 1 1
..AAACGGAAAAAAGACAGCAATGTTAGGAGAA.................................................................................................................................................................................. 31 0 1 1.00 1 1
.........................................................................................TAAGACCCTTGACAATCCTTGGGGATAGTCAGT......................................................................................... 33 1 1 1.00 1 1
..AAACGGAAAAAAGACAGCAATGTTAGGAGAAC................................................................................................................................................................................. 32 0 1 1.00 1 1
................................................................................................................................TGAGTTTCTCACTGGGGTCTGGGCCTTGGT..................................................... 30 0 1 1.00 1 1
...................................................................CAAAGATACCTGGAAGAAACGTTAAGACCC.................................................................................................................. 30 0 1 1.00 1 1
.TAAACGGAAAAAAGACAGCAATGTTAGGAGAAC................................................................................................................................................................................. 33 0 1 1.00 1 1
...................................................................CAAAGATACCTGGAAGAAACGTTAAGACCT.................................................................................................................. 30 1 1 1.00 1 1
.................................................................................................................ATAGTCAGGGGGAGCTGAGTTTCA.......................................................................... 24 1 1 1.00 1 1
.................................................................CACAAAGATACCTGGAAGAAACGTTAAGACC................................................................................................................... 31 0 1 1.00 1 1

Anti-sense strand reads

TATTTGCCTTTTTTCTGTCGTTACAATCCTCTTGTTACCTCTTAAAATTTTTCAATTGTATAGTCGTGTTTCTATGGACCTTCTTTGCAATTCTGGGAACTGTTAGGAACCCCTATCAGTCCCCCTCGACTCAAAGAGTGACCCCAGACCCGGAACCAAATTTATAATAATTTCGTTCCCCATGGGGTACTCTTCAGACCTTCTACACCCG

**************************************..((((((....((((.(((((.((((((.......((((((((.((((....)))).)))))))).......))))))..)))))))))..))..))))...............********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..............................................................................................................................CGACTCAAAGATTGACC.................................................................... 17 1 18 0.06 1 1

Generated: 09/01/2015 at 11:51 AM