ID:

eca-mir-8965

 Coordinate:

chr22:26836787-26836891 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.6 -42.5 -42.1

Sense Strand Reads

TCCGGTGGGACTTTGAGGCGGAACCTGAGGACTGTGCCCCAGTGGTGGTGGAGCTCCCCGAGGGTTCGGAGACTGGCTAACTGGGAGTGCTCTCGGCCATGGGAGGCCCCTTCCCACATGGCTGCAGTCCTGGCCTCTCCATTTATCCCTTCCTGCTGGGACCTGCCAGGGCAGCGGTACCACCAGGTTCCGCAAAAATGGAGCC

*********************************************************..(((((...(((((..((((....((((.(((....((((((((((((...)))))))..)))))))).)))))))))))))......))))).***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...........TTTGAGGCGGAACCTGAGGACTGTGCC....................................................................................................................................................................... 27 0 1 3.00 3 3
..............................................................................................................TTCCCACATGGCTGCAGTCCTGGCCTC.................................................................... 27 0 1 2.00 2 2
............TTGAGGCGGAACCTGAGGACTGTGCCCCAG................................................................................................................................................................... 30 0 1 1.00 1 1
............TTGAGGCGGAACCTGAGGACTGTGCC....................................................................................................................................................................... 26 0 1 1.00 1 1
.................GCGGAACCTGAGGACTGTGCCCCGGTGGTGGTGGAG........................................................................................................................................................ 36 1 1 1.00 1 1
.............................................................................TAACTGGGAGTGCTCTCGGCCATGGGAGGCCC................................................................................................ 32 0 1 1.00 1 1
...........TTTGAGGCGGAACCTGAGGACTGTGC........................................................................................................................................................................ 26 0 1 1.00 1 1
.........................................................................................................................................TCCATTTATCCCTTCCTGCTGGGACCTG........................................ 28 0 1 1.00 1 1
........................CTGAGGACTGTGCCCCAGTGGTGGTGGAGC....................................................................................................................................................... 30 0 1 1.00 1 1
...........TTTGAGGCGGAACCTGAGGACTGTGCCCCA.................................................................................................................................................................... 30 0 1 1.00 1 1
...........TTTGAGGCGGAACCTGAGGACTGTGCCAA..................................................................................................................................................................... 29 2 1 1.00 1 1
....................................................................GAGACTGGCTAACTGGGAGTGCTCTCGGCCT.......................................................................................................... 31 1 1 1.00 1 1
........................................................................CTGGCTAACTGGGAGTGCTCTCGGCC........................................................................................................... 26 0 1 1.00 1 1
............TTGAGGCGGAACCTGAGGACTGTGT........................................................................................................................................................................ 25 1 1 1.00 1 1
.......................CCTGAGGACTGTGCCCCAGTGGTGGTGGA......................................................................................................................................................... 29 0 1 1.00 1 1
.........................TGAGGACTGTGCCCCAGTGGTGGTGGA......................................................................................................................................................... 27 0 1 1.00 1 1

Anti-sense strand reads

AGGCCACCCTGAAACTCCGCCTTGGACTCCTGACACGGGGTCACCACCACCTCGAGGGGCTCCCAAGCCTCTGACCGATTGACCCTCACGAGAGCCGGTACCCTCCGGGGAAGGGTGTACCGACGTCAGGACCGGAGAGGTAAATAGGGAAGGACGACCCTGGACGGTCCCGTCGCCATGGTGGTCCAAGGCGTTTTTACCTCGG

*****************************************************..(((((...(((((..((((....((((.(((....((((((((((((...)))))))..)))))))).)))))))))))))......))))).********************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:51 AM