ID:

eca-mir-8964

Coordinate:

chr22:26240758-26240898 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-75.2 -75.1 -74.9 -74.8
mature

  1. chr1:105429268-105429289 +
  2. eca-mir-8964  chr22:26240838-26240859 +
star

Sense Strand Reads

AACAGCTAGACCTAAGCTAATACTTGGAATTCATACAAGGCAATCCCTGAGAcaggacccagactagggcgagacaggagaggcacctggagtgtagaatttaaggagatgcgcactatcaacctgaaacgcctccttaaattctgcaccctgggagcctctcttgctttatcctagtcccagACGTGCCCTCAGCTCCCAGTAACGTCACCTCTTAGTAGTCTCAGTATATCCTTCTGAG

***********************************....((......((((..........((((((((.(((.((((((((((.(((((.(((((((((((((((((..(((................)))))))))))))))))))).))))).)))))))))))))..))))))))...........)))).......))...***********************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................AGTGTAGAATTTAAGGAGATGCGG............................................................................................................................... 24 1 1 1.00 1 1
..................................................................................................................................GCCTCCTTAAATTCTGCACCCT......................................................................................... 22 0 2 1.00 2 2

Anti-sense strand reads

TTGTCGATCTGGATTCGATTATGAACCTTAAGTATGTTCCGTTAGGGACTCTGTggTGGGTgTGtTgggGgTgTGTggTgTggGTGGtggTgtgtTgTTtttTTggTgTtgGgGTGtTtGTTGGtgTTTGgGGtGGttTTTttGtgGTGGGtgggTgGGtGtGttgGtttTtGGtTgtGGGTgTGCACGGGAGTCGAGGGTCATTGCAGTGGAGAATCATCAGAGTCATATAGGAAGACTC

***********************************....((......((((..........((((((((.(((.((((((((((.(((((.(((((((((((((((((..(((................)))))))))))))))))))).))))).)))))))))))))..))))))))...........)))).......))...***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:52 AM