ID:

eca-mir-8962

 Coordinate:

chr22:23398089-23398189 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-52.6 -52.6 -52.5

Sense Strand Reads

AGGTTGAAGGCCCCAGTGGGGGGAGGTGGCCTCCTTCATGCGGGTCCCTGCAGCGGCGGCGTGGAGCTGGGCTGCACTCTGCACTTTTCTGACTCCCCAGGGAGCTGTTAGCAAGGCTGCAGACATTCCAGCCATGCAGGGCTGGCCTTCCCTGCCTGGTCCTCAGACAGCTCCAAGGACTTCTCACCTACCCACCTTCGG

***********************************(((.(((((....((((((..((((.....)))).)))))).((((((((((.((((((((....)))...))))).)))).))))))....((((((......)))))).....))))).))).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
........................................................................TGCACTCTGCACTTTTCTGACTCCCCAGGA................................................................................................... 30 1 1 1.00 1 1
...................................................................TGGGCTGCACTCTGCACTTTTCTGACTCC......................................................................................................... 29 0 1 1.00 1 1
............................................................................................................TAGCAAGGCTGCAGACATTCCAGAAA................................................................... 26 2 1 1.00 1 1
.........................................................................................................TGTTAGCAAGGCTGCAGACATTCCAGCCATT................................................................. 31 1 1 1.00 1 1

Anti-sense strand reads

TCCAACTTCCGGGGTCACCCCCCTCCACCGGAGGAAGTACGCCCAGGGACGTCGCCGCCGCACCTCGACCCGACGTGAGACGTGAAAAGACTGAGGGGTCCCTCGACAATCGTTCCGACGTCTGTAAGGTCGGTACGTCCCGACCGGAAGGGACGGACCAGGAGTCTGTCGAGGTTCCTGAAGAGTGGATGGGTGGAAGCC

***********************************(((.(((((....((((((..((((.....)))).)))))).((((((((((.((((((((....)))...))))).)))).))))))....((((((......)))))).....))))).))).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:50 AM