ID:

eca-mir-8940-1

Coordinate:

chr24:386776-386886 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-33.3	-32.6

mature

star

Sense Strand Reads

GTTTtTtgtGTCCTAGACCTTTAGAAACTTCTCTCTTGTTATGGATGCTCGGCTGAGCCAATGGCAACCTCTGTCAACTTGTGTCTGCTCCTGGCATCTGGCCGCCTGGACTATTTGCCGGAGCTGGATCAGCTGGGGTCTGCTGAGGGCGTCAGACAGCAGACTCATGTAGGATCAGAATGTCCGTCTCATCACCCCGCCATCATCCTCT *********************************************************..((((((((((.((.....((.(((((((((.((((..(((((....)).)))..))))))))).)))))))).))))).)))))......**********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR871532 testes
..........................................................................CAACTTGTGTCTGCTCCTGGCATCTG...............................................................................................................	26	0	2	0.50	1	1
.........................................................................................................................................................................TAGGATCAGAATGTCCGTCTCATCACC...............	27	0	2	0.50	1	1
...............................................................................TGTGTCTGCTCCTGGCATCTGGCCGCCT........................................................................................................	28	0	2	0.50	1	1
.........................................................................................................................................................................TAGGATCAGAATGTCCGTCTCATCACCCCG............	30	0	2	0.50	1	1
....................................................................................................................................................................TCATGTAGGATCAGAATGTCCGTCTC.....................	26	0	3	0.33	1	1
.................................................................................................................TTTGCCGGAGCTGGATCAGCTGG...........................................................................	23	0	6	0.17	1	1
.......................................................................................................................................................TCAGACAGCAGGCTCATGT.........................................	19	1	7	0.14	1	1

Anti-sense strand reads

CAAAtAtgtCAGGATCTGGAAATCTTTGAAGAGAGAACAATACCTACGAGCCGACTCGGTTACCGTTGGAGACAGTTGAACACAGACGAGGACCGTAGACCGGCGGACCTGATAAACGGCCTCGACCTAGTCGACCCCAGACGACTCCCGCAGTCTGTCGTCTGAGTACATCCTAGTCTTACAGGCAGAGTAGTGGGGCGGTAGTAGGAGA **********************************************************..((((((((((.((.....((.(((((((((.((((..(((((....)).)))..))))))))).)))))))).))))).)))))......*********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR871532 testes
.....................................................................................................................................................GCAGTCTGTCGTCTGAGTACATCCTAGT..................................	28	0	2	1.00	2	2
.........CAGGATCTGGAAATCTTTGAAGAGAGAACAATACCTACG...................................................................................................................................................................	39	0	2	0.50	1	1
......................................................................................................................................................CAGTCTGTCGTCTGAGTACATCCT.....................................	24	0	7	0.14	1	1

Generated: 09/01/2015 at 11:54 AM