ID:

eca-mir-8937-1

 Coordinate:

chr18:3937365-3937475 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature

  1. eca-mir-8937-1  chr18:3937374-3937398 -
  2. chrUn:67490841-67490865 -
star

  1. eca-mir-8937-1  chr18:3937438-3937468 -
  2. chr18:9531109-9531139 -
  3. chrUn:67490905-67490935 -

Sense Strand Reads

gtGtGGGtGtTGgtGtTtGttGtGggTGgTTgTgTgTggTGGGtttTtTgTGGttGggGgtgttGTgtgTTgggTTgggGTggTGtGGGtGgGgTGGGTTggtTGgggtGgggGgTGgtGtGGgGGgTGGGttgTgTtTGTggTGGGTGGggtgtTGgggtGggtGGtGTgtGGGGTTgGGTTGgTgTGGGtGGTGGtgGtTGggtTTGGG

******************************************.............................................................................................................................******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCC........................................................... 25 0 2 37.50 75 75
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGAGA................... 29 1 1 20.00 20 20
.............................TTCTCTCTCCTGGGAAATATCTGGAAGCCT........................................................................................................................................................ 30 1 4 18.50 74 74
.............................TTCTCTCTCCTGGGAAATATCTGGAAGCC......................................................................................................................................................... 29 0 4 15.50 62 62
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACA........................................................ 28 0 2 14.00 28 28
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGA................... 29 0 1 12.00 12 12
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGAGT................... 30 2 1 9.00 9 9
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAA...................................................................................................................................................................... 29 0 2 8.00 16 16
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATG...................................................... 30 0 2 8.00 16 16
.......................................TGGGAAATATCTGGAAGCCGCACAAGTC................................................................................................................................................ 28 0 4 7.25 29 29
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCCT................................................................... 29 0 2 5.50 11 11
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAAA..................................................................................................................................................................... 30 0 2 5.50 11 11
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATA...................................................... 30 1 2 5.00 10 10
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGGGA................... 30 0 1 5.00 5 5
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACAT....................................................... 29 0 2 5.00 10 10
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGAGT................... 29 2 1 5.00 5 5
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGTC................................................................................................................................................ 31 0 4 4.50 18 18
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGGGT................... 30 1 1 4.00 4 4
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAATT.................................................................................................................................................................... 31 1 2 4.00 8 8
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGATT................. 31 2 1 4.00 4 4
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTC........................ 24 0 1 4.00 4 4
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATGCCCAGC................................................ 36 0 2 4.00 8 8
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCT....................... 25 0 1 4.00 4 4
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCC.................................................................... 28 0 2 4.00 8 8
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTC........................ 25 0 1 4.00 4 4
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGC............................................................ 24 0 2 3.50 7 7
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGT................................................................................................................................................. 30 0 4 3.50 14 14
.....................................CCTGGGAAATATCTGGAAGCCGCACAAGTC................................................................................................................................................ 30 0 4 3.50 14 14
..................................TCTCCTGGGAAATATCTGGAAGCCGCACA.................................................................................................................................................... 29 0 4 3.25 13 13
.......................................TGGGAAATATCTGGAAGCCGCACAAGTCA............................................................................................................................................... 29 0 4 3.00 12 12
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGAGA................... 30 1 1 3.00 3 3
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGT................... 29 1 1 3.00 3 3
...................................CTCCTGGGAAATATCTGGAAGCCGCACA.................................................................................................................................................... 28 0 4 2.75 11 11
................................TCTCTCCTGGGAAATATCTGGAAGCCGCACT.................................................................................................................................................... 31 1 4 2.75 11 11
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCA.......................................................... 26 0 2 2.50 5 5
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAAAT.................................................................................................................................................................... 31 0 2 2.50 5 5
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAAT..................................................................................................................................................................... 30 1 2 2.50 5 5
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCAC......................................................... 27 0 2 2.50 5 5
.........................................................CGCACAAGTCACTTCCCTTCCCGTCCTGAGT........................................................................................................................... 31 1 3 2.33 7 7
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGAAA................... 30 2 1 2.00 2 2
.................................................................................................................................................................................TCGGTTGCTCTGAGAGGTGGACGATGCCT..... 29 2 1 2.00 2 2
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATT...................................................... 30 1 6 2.00 12 12
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCT.......................................................... 26 1 2 2.00 4 4
................................................................................................................................................................................TTCGGTTGCTCTGGGAGGTGGACGATGCCT..... 30 1 1 2.00 2 2
................................TCTCTCCTGGGAAATATCTGGAAGCCGCA...................................................................................................................................................... 29 0 4 2.00 8 8
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTT...................... 26 1 1 2.00 2 2
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTAGA.................... 28 2 1 2.00 2 2
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGGTT................... 30 2 1 2.00 2 2
.................................................................................................................................................................................TCGGTTGCTCTGAGAGGTGGACGATGCCATT... 31 1 1 2.00 2 2
......................................CTGGGAAATATCTGGAAGCCGCACAAGTC................................................................................................................................................ 29 0 4 1.50 6 6
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACT........................................................ 28 1 2 1.50 3 3
......................................................................................................................................TCTATGTCCTGGGTGGCCACATGCCCAGC................................................ 29 0 2 1.50 3 3
.........................................................CGCACAAGTCACTTCCCTTCCCGTCCTGAGA........................................................................................................................... 31 1 3 1.33 4 4
................................TCTCTCCTGGGAAATATCTGGAAGCC......................................................................................................................................................... 26 0 4 1.25 5 5
.................................................................................................................................................................................TCGGTTGCTCTGAGAGGTGGACGATGCC...... 28 1 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGATTTT............... 33 3 1 1.00 1 1
...............................................................................................................................................................................GTTCGGTTGCTCTGGGAGGTGGACGATGCCT..... 31 1 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGATT................... 29 3 1 1.00 1 1
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGGTA................... 30 1 1 1.00 1 1
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCAAA..................... 28 3 1 1.00 1 1
..................................................................................................................................................................CCAGGAGTCAGCGGTTCGGTTGCT......................... 24 1 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGAGAGT................. 31 2 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGA..................... 27 1 1 1.00 1 1
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTG...................... 27 0 1 1.00 1 1
.....................................................................................................................................CTCTATGTCCTGGGTGGCCACATGCCCAGCC............................................... 31 0 2 1.00 2 2
...............................................................................................................................................................................GTTCGGTTGCTCTGAGAGGTGGACGATGCC...... 30 1 1 1.00 1 1
.................................................................................................................................................................GCCAGGAGTCAGGGGTTCGGTTGCTCTGA..................... 29 1 1 1.00 1 1
................................................................................................................................................................................TTCGGTTGCTCTGGGAGGTGGACGATGCC...... 29 0 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGTTTT................ 32 3 1 1.00 1 1
.........................................................CGCACAAGTCACTTCCCTTCCCGTCCTGAGG........................................................................................................................... 31 0 3 1.00 3 3
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAT...................................................................................................................................................................... 29 1 2 1.00 2 2
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTTT..................... 27 2 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGATTC................ 32 3 1 1.00 1 1
..............................TCTCTCTCCTGGGAAATATCTGGAAGCCT........................................................................................................................................................ 29 1 4 1.00 4 4
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGTT.................. 30 2 1 1.00 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTAGCC........................................................... 25 1 2 1.00 2 2
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCCTGT................................................................. 31 1 2 1.00 2 2
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCT......................... 24 0 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGGGAT.................. 30 1 1 1.00 1 1
.......................................TGGGAAATATCTGGAAGCCGCACAAGTCT............................................................................................................................................... 29 1 4 1.00 4 4
........................................................................................................................................................................GTCAGGGGTTCGGTTGCTCTGGGTT.................. 25 2 1 1.00 1 1
..........TGCAGATAGAAGAGCCTGCTTCTCTCTCCTG.......................................................................................................................................................................... 31 0 2 1.00 2 2
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGGGTT.................. 31 2 1 1.00 1 1
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCT.................................................................... 28 1 2 1.00 2 2
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGATT................... 30 3 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTG...................... 26 0 1 1.00 1 1
...................................................................................................................................................................CAGGAGTCAGGGGTTCGGTTGCTCTGAGTA.................. 30 3 2 1.00 2 2
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTA...................... 27 1 1 1.00 1 1
.................................................................................................................................................................................TCGGTTGCTCTGGGAGGTGGACGATGCCAAA... 31 2 1 1.00 1 1
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGGG.................... 29 0 1 1.00 1 1
......................................................................................................................AGATGCGGCTGGGAACTCTATGTCCTGGG................................................................ 29 1 2 1.00 2 2
......................................................................................................................................TCTATGTCCTGGGTGGCCACATGCCCAGCC............................................... 30 0 2 1.00 2 2
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGTT.................... 29 2 1 1.00 1 1
.........................................................................................................................................................................TCAGGGGTTCGGTTGCTCTGGGAGGTGT.............. 28 1 1 1.00 1 1
..................................................................................................................................................................CCAGGAGTCAGGGGTTCGGTTGCTCTGGTCT.................. 31 3 1 1.00 1 1
.....................................................................................................................CAGAGGCGGCTGGGAACTCTATGTCCTGGT................................................................ 30 1 2 1.00 2 2
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCCTTT................................................................. 31 2 2 1.00 2 2
...................................CTCCTGGGAAATATCTGGAAGCCGCACAA................................................................................................................................................... 29 0 4 0.75 3 3
..................................TCTCCTGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 28 0 4 0.75 3 3
................................TCTCTCCTGGGAAATATCTGGAAGCCGCACC.................................................................................................................................................... 31 1 4 0.75 3 3
...................................CTCCTGGGAAATATCTGGAAGCCGCACT.................................................................................................................................................... 28 1 4 0.75 3 3
.......................................TGGGAAATATCTGGAAGCCGCACA.................................................................................................................................................... 24 0 4 0.75 3 3
.........................................................CGCACAAGTCACTTCCCTTCCCGTCCTGAG............................................................................................................................ 30 0 3 0.67 2 2
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCAA.......................................................... 26 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGG............................................................. 23 0 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATGTA.................................................... 32 2 2 0.50 1 1
................TAGAAGAGCCTGCTTCTCTCTCCGGGGAAA..................................................................................................................................................................... 30 1 2 0.50 1 1
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAAG..................................................................................................................................................................... 30 1 2 0.50 1 1
.......................................TGGGAAATATCTGGAAGCCGCACAAGT................................................................................................................................................. 27 0 4 0.50 2 2
...................................CTCCTGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 27 0 4 0.50 2 2
...............................................................................................................................TGGGAAATCGATGTCCTGGGTGGCC........................................................... 25 2 2 0.50 1 1
................................TCTCTCCTGGGAAATATCTGGAAGCCT........................................................................................................................................................ 27 1 4 0.50 2 2
......................................................................................................................................TCTATGTCCTGGGTGGCCACATGCCCAGCT............................................... 30 1 2 0.50 1 1
..............................................TATCTGGAAGCCGCACAAGTCACTTC........................................................................................................................................... 26 0 4 0.50 2 2
................TAGAAGAGCCTGCTTCTCTCTCCTGGGAC...................................................................................................................................................................... 29 1 2 0.50 1 1
................TAGAAGAGCCTGCTTCTCTCTTCTGGGAA...................................................................................................................................................................... 29 1 2 0.50 1 1
......................................................................................................................AGAGGCAGCTGGGAACTCTATGTCCTGGGT............................................................... 30 1 2 0.50 1 1
................................TCTCTCCTGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 30 0 4 0.50 2 2
................................TCTCTCCTGGGAAATATCTGGAAGCCGCATT.................................................................................................................................................... 31 2 4 0.50 2 2
.....................................................................................................................CAGAGGCGGCTGGGAACTCTATGTCCTGGG................................................................ 30 0 2 0.50 1 1
......................................................................................................................AGATGCGGCTGGGAACTCTATGTCCTGGT................................................................ 29 2 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTGCTGGGTGGCC........................................................... 25 1 2 0.50 1 1
.....................................................................................................................CAGATGCGGCTGGGAACTCTATGTCCTGGG................................................................ 30 1 2 0.50 1 1
.......................................................................................................................GAGGCGGCTGGGAACTCTATGTCCTGGGT............................................................... 29 0 2 0.50 1 1
......................................................................................................................................TCTATGTCCTGGATGGCCACATGCCCAGC................................................ 29 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACTT....................................................... 29 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATGT..................................................... 31 1 2 0.50 1 1
................TAGAAGAGCCTGCTTCTCTCTCCTGGGATT..................................................................................................................................................................... 30 2 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTAGCCACATG...................................................... 30 1 2 0.50 1 1
...................................................................................................................TGCAGATGCGGCTGGGAACTCTATGTCCTT.................................................................. 30 2 2 0.50 1 1
...................................CTCCTGGGAAATATCTGGAAGCCGCACAAT.................................................................................................................................................. 30 1 4 0.50 2 2
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCCTT.................................................................. 30 1 2 0.50 1 1
................TAGAAGAGCCTGCTTCTCTCTCCTGGGA....................................................................................................................................................................... 28 0 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGGGGCT........................................................... 25 2 2 0.50 1 1
...................................................................................................................TGCAGAGGCGGCGGGGAACTCTATGTCCTTT................................................................. 31 3 2 0.50 1 1
...............................................................................................................................TGGGAACTCGATGTCCTGGGTGGCCACATG...................................................... 30 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATGCCCAGCCAT............................................. 39 1 2 0.50 1 1
.......................................TGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 23 0 4 0.50 2 2
......................................................................................................................................TCTATGTCCTGGGTGGCCACATGCCC................................................... 26 0 2 0.50 1 1
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCCTGG................................................................. 31 0 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACTA....................................................... 29 2 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCTCATGCCCAGC................................................ 36 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATGTT.................................................... 32 2 2 0.50 1 1
..........................TGCTTCTCTCTCCTGGGAAATATCTGGAAGC.......................................................................................................................................................... 31 0 4 0.50 2 2
...............................................................................................................................TGGGAACTCTATGTCCGGGGTTGCCAC......................................................... 27 2 2 0.50 1 1
........................................................................................................................................TATGTCCTGGGTGGCCACATGCCAT.................................................. 25 2 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCGGGGTGGCC........................................................... 25 1 2 0.50 1 1
...............................................................................................................................TGGGAAATCGATGTCCTGGCTGGCCACATG...................................................... 30 3 2 0.50 1 1
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCTTT.................................................................. 30 2 2 0.50 1 1
.........................................................................................................................TGCGGCTGGGAACTCTATGGCCTGGGA............................................................... 27 3 2 0.50 1 1
...................................................................................................................TGCAGAGGCGACTGGGAACTCTATGTCCT................................................................... 29 1 2 0.50 1 1
.....................................................................................................................................CTCTATGTCCTGGGTGGCCACATGCCCA.................................................. 28 0 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTACTGGGTGGCC........................................................... 25 1 2 0.50 1 1
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTCCTATT................................................................ 32 3 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCTT......................................................... 27 2 2 0.50 1 1
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTATGTA..................................................................... 27 1 2 0.50 1 1
......................................CTGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 24 0 4 0.50 2 2
...............................................................................................................................TGGGAACTCTATGTCCTGGATGGCC........................................................... 25 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTTGCC........................................................... 25 1 2 0.50 1 1
...................................ATCCTGGGAAATATCTGGAAGCCGCACAAGT................................................................................................................................................. 31 1 4 0.50 2 2
...............................................................................................................................TGGGAACTCTATGTCCTGGGTCGCCACATA...................................................... 30 2 2 0.50 1 1
.........................................................................................................................TGCGGCTGGGAACTCTATGTCCTGGGTGGCC........................................................... 31 1 2 0.50 1 1
................................................................................................................CGCTGCAGAGGCGGCTGGGAACT............................................................................ 23 0 2 0.50 1 1
......................................CTGGGAAATATCTGGAAGCCGCAAAAGTC................................................................................................................................................ 29 1 4 0.50 2 2
................................................................................................................................GGGAACTCTATGTCCTGGGTGGCCACATGCCCAGCCGA............................................. 38 2 2 0.50 1 1
...............................................................................................................................TGGGAACTCTAGGTCCTGGGTGGCC........................................................... 25 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATGCA.................................................... 32 1 2 0.50 1 1
......................................................................................................................AGAGGCGGCTGGGAACTCTATGTCC.................................................................... 25 0 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCA........................................................... 25 1 2 0.50 1 1
.....................................................................................................................CAGAGGCGGCTGGGAACTCTATGTCCTGGA................................................................ 30 1 2 0.50 1 1
...................................................................................................................TGCAGAGGCGGCTGGGAACTCTAAAT...................................................................... 26 2 2 0.50 1 1
.......................................................................................................................GATGCGGCTGGGAACTCTATGTCCTGGGTG.............................................................. 30 1 2 0.50 1 1
................TAGAAGAGCCTGCTTCTCTCTGCTGGGAA...................................................................................................................................................................... 29 1 2 0.50 1 1
..........................TGCTTCTCTCTCCTGGGAAATATCTGGAAGCCT........................................................................................................................................................ 33 1 4 0.50 2 2
...................................................................................................................TGCAGAGGCGGCTGGGAACCCTATGTCCT................................................................... 29 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGCGGCC........................................................... 25 1 2 0.50 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCATT........................................................ 28 2 2 0.50 1 1
...........................................................CACAAGTCACTTCCCTTCCCGTCCTGAGGGAG........................................................................................................................ 32 0 7 0.43 3 3
.........................................................CGCAAAAGTCACTTCCCTTCCCGTCCTGATT........................................................................................................................... 31 3 3 0.33 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATGA..................................................... 31 1 3 0.33 1 1
.........................................................CGCACAAGTCACTTCCCTTCCCGTCCTGA............................................................................................................................. 29 0 3 0.33 1 1
........................................................CCGCACAAGTCACTTCCCTTCCCGTCCTGATT........................................................................................................................... 32 2 3 0.33 1 1
...................................CTCCTGGGAAATATCTGGAAGCCGCACAAGT................................................................................................................................................. 31 0 4 0.25 1 1
.............................TTCTCTTTCCTGGGAAATATCTGGAAGCC......................................................................................................................................................... 29 1 4 0.25 1 1
..................................TCTCCTGGGAAATATCTGGAAGCCGCACT.................................................................................................................................................... 29 1 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCGGCACAAGTC................................................................................................................................................ 31 1 8 0.25 2 2
..............................TCTCTCTCCTGGGAAATATCTGGAAGCC......................................................................................................................................................... 28 0 4 0.25 1 1
................................TCTCTCCTGGGAAATATCTGGAAGCCGCACTTT.................................................................................................................................................. 33 3 4 0.25 1 1
.....................................CCTGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 25 0 4 0.25 1 1
.............................TTCTCTCTCCTGGGAAATAGCTGGAAGCC......................................................................................................................................................... 29 1 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 26 0 4 0.25 1 1
...................................CTCCTGGGAAATATCTGGAAGCCGCACAAGTT................................................................................................................................................ 32 1 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGTA................................................................................................................................................ 31 1 4 0.25 1 1
................................TCTCTCCTGGGAAATATCTGGAAGCCG........................................................................................................................................................ 27 0 4 0.25 1 1
..........................TGCTTCTCTCTCCTGGGAAATATCTGGAAGT.......................................................................................................................................................... 31 1 4 0.25 1 1
.......................................TGGGAAATATCTGGAAGCCACACAAGTCT............................................................................................................................................... 29 2 4 0.25 1 1
.............................TTCTCTCTCCTGGGAAATATCTGGAAGCCGC....................................................................................................................................................... 31 0 4 0.25 1 1
....................................TCCTGGGAAATGTCTGGAAGCCGCACAAGTC................................................................................................................................................ 31 1 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGTCTT.............................................................................................................................................. 33 2 4 0.25 1 1
.............................TTCTCTCTCCTGGGAAATACCTGGAAGCC......................................................................................................................................................... 29 1 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCACAAG.................................................................................................................................................. 29 0 4 0.25 1 1
..................................TCTCCTGGGGAATATCTGGAAGCCGCACA.................................................................................................................................................... 29 1 4 0.25 1 1
.......................................TGGGAAATATCTGGAAGCCGCACAAGCC................................................................................................................................................ 28 1 4 0.25 1 1
.............................TTCTCTCTCCTGGGAAATATCTGGAAGCCG........................................................................................................................................................ 30 0 4 0.25 1 1
.............................TTCTCTCTCCTAGGAAATATCTGGAAGCC......................................................................................................................................................... 29 1 4 0.25 1 1
...................................CTCCTGGGAAATATCTGGAAGCCGCACAATT................................................................................................................................................. 31 1 4 0.25 1 1
..................................TCTCCTGGGAATTATCTGGAACCCGCACA.................................................................................................................................................... 29 2 4 0.25 1 1
............................CTTCTCTCTCCTGGGAAATATCTGGAAGCC......................................................................................................................................................... 30 0 4 0.25 1 1
..................................................TGGAAGCCGCACAAGTCACTTCCCTTCCCG................................................................................................................................... 30 0 4 0.25 1 1
................................TCTCTCGTGGGAAATATCTGGAAGCCGCATA.................................................................................................................................................... 31 2 4 0.25 1 1
.................................CTCTCCTGGGAAATATCTGGAAGCCGCA...................................................................................................................................................... 28 0 4 0.25 1 1
.............................TTCTCTTTCCTGGGAAATATCTGGAAGCCT........................................................................................................................................................ 30 2 4 0.25 1 1
..................................TCTCCTGGGAAATATCTGGAAGCCGCA...................................................................................................................................................... 27 0 4 0.25 1 1
..........................TGCTTCTCTCTCCTGGGAAATATCTGGAAG........................................................................................................................................................... 30 0 4 0.25 1 1
..................................................TGGAAGCCGCACAAGTCACTTCCCTTCCCGTC................................................................................................................................. 32 0 4 0.25 1 1
......................................CTGGGAAATATCTGGAAGCCGCACAAGTCT............................................................................................................................................... 30 1 4 0.25 1 1
.............................TTCTCTCTCATGGGAAATACCTGGAAGCCT........................................................................................................................................................ 30 3 4 0.25 1 1
................................TCTCTCCTGGGAAATATCTGGAAGCCGC....................................................................................................................................................... 28 0 4 0.25 1 1
................................TCTCTCCTGGGAAATATCTGGAAGCCGCACA.................................................................................................................................................... 31 0 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGA................................................................................................................................................. 30 1 4 0.25 1 1
..............................TCTCTCTCCTGGGAGAGATCTGGAAGCCT........................................................................................................................................................ 29 3 4 0.25 1 1
...........................................AAATATCTGGAAGCCGCACAAGTCA............................................................................................................................................... 25 0 4 0.25 1 1
.............................TTCTCTCTCCTGGGAAATATCTGGAAGCCA........................................................................................................................................................ 30 1 4 0.25 1 1
...................................CTCCTGGGAAATATCTGGAAGCCGCA...................................................................................................................................................... 26 0 4 0.25 1 1
...................................CTCCTGGGAAATATCTGGAAGCCGCAAT.................................................................................................................................................... 28 2 4 0.25 1 1
..............................................TATCTGGAAGCCGCACAAGTCACTT............................................................................................................................................ 25 0 4 0.25 1 1
.............................TTCTCTCTCCTGGGGAGTATCTGGAAGCCT........................................................................................................................................................ 30 3 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGTCTTT............................................................................................................................................. 34 2 4 0.25 1 1
.......................................TGGGAAATATCTGGAAGCCGCACAAGTCAC.............................................................................................................................................. 30 0 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGTCT............................................................................................................................................... 32 1 4 0.25 1 1
.................................CTCTCCTGGGAAATATCTGGAAGCCGCAC..................................................................................................................................................... 29 0 4 0.25 1 1
..............................................................................................TGGGTTCCATGCCCAGCCCGCTGCATTA......................................................................................... 28 3 4 0.25 1 1
...................................CTCCTGGGAGATATCTGGAGGCCGCACTA................................................................................................................................................... 29 3 4 0.25 1 1
.............................TTCTCTCTCGTGGGAAATATCTGGAAGCC......................................................................................................................................................... 29 1 4 0.25 1 1
.............................TTCTCTCTCCTGAGAAATATCTGGAAGCCT........................................................................................................................................................ 30 2 4 0.25 1 1
...................................CTCCTGGGAAATATCTGGAAGCCGCACAAG.................................................................................................................................................. 30 0 4 0.25 1 1
.......................................TGGGAAATATCTGGAAGCCGCAAAAGTCT............................................................................................................................................... 29 2 4 0.25 1 1
....................................TCCTGGGAAGTATCTGGAAGCCGCACAAGTC................................................................................................................................................ 31 1 4 0.25 1 1
..........................................GAAATATCTGGAAGCCGCACAAGTC................................................................................................................................................ 25 0 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCACAAGTTTT.............................................................................................................................................. 33 3 4 0.25 1 1
......................................CTGGGAAATATCTGGAAGCCGCACAAGTT................................................................................................................................................ 29 1 4 0.25 1 1
....................................TCCTGGGAAATATCTGGAAGCCGCAAAAGT................................................................................................................................................. 30 1 4 0.25 1 1
.......................................TGGGAAATATCTGGGAGCCGCACA.................................................................................................................................................... 24 1 4 0.25 1 1
.......................................TGGGAAATATCTGGAAGCCGCGCAAGTCT............................................................................................................................................... 29 2 5 0.20 1 1
................AAGAAGAGCCTGCTTCTCTCTCCTGGGA....................................................................................................................................................................... 28 1 5 0.20 1 1
................AAGAAGAGCCTGCTTCTCTCTCCTGGGAA...................................................................................................................................................................... 29 1 5 0.20 1 1
.....................................................................................................................................................................................TTGCTCTGAGAGGTGGACGATGCCATT... 27 1 11 0.18 2 2
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACAAT...................................................... 30 2 6 0.17 1 1
...........................................................................TCCCGTCCTGAGGGAGCGCTGGGGTCCATGT......................................................................................................... 31 2 6 0.17 1 1
................TAGAAGAGCCTACTTCTCTCTCCTGGGAATT.................................................................................................................................................................... 31 2 6 0.17 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGATGGCCACATT...................................................... 30 2 6 0.17 1 1
...............................................................................................................................TGGGAAATCTATGTCCTGGGTGGCCACATT...................................................... 30 2 6 0.17 1 1
.............................................................CAAGTCACTTCCCTTCCCGTCCTGAGGGAGC....................................................................................................................... 31 0 6 0.17 1 1
..................................................................CACTTCCCTTCCCGTCCTGAGGGAGCGC..................................................................................................................... 28 0 6 0.17 1 1
....................................................................................................................................................................................GTTGCTCTGGGAGGTGGACGATGCCATTG.. 29 0 7 0.14 1 1
...................................................................................TGAGGGAGCGCTGGGTTCCATGCCCAGCCCGCTA.............................................................................................. 34 1 7 0.14 1 1
......................................................................................................................................................................................TGCTCTGGGAGGTGGACGATGCCATT... 26 0 7 0.14 1 1
...........................................................CACAAGTCACTTCCCTTCCCGTCCTGAGGGATT....................................................................................................................... 33 2 7 0.14 1 1
...................................................................................TGAGGGAGCGCTGGGTTCCATGCCCAGCC................................................................................................... 29 0 7 0.14 1 1
...............................................................................................................................TGGGAACTCTATGTCCTGGGTGGCCACATTA..................................................... 31 2 7 0.14 1 1
.............................TTCTCTCTCCTGGGAAATATCTGGAAGC.......................................................................................................................................................... 28 0 8 0.13 1 1
...........................................................CACAAGTCACTTCCCTTCCCGTC................................................................................................................................. 23 0 8 0.13 1 1
...........................................................CACAAGTCACTTCCCTTCCCGTCCT............................................................................................................................... 25 0 8 0.13 1 1
....................................TCCTGGGAAATATCTGGAAGCAGCACAAGTC................................................................................................................................................ 31 1 8 0.13 1 1
......................................................................................................................................................................................TGCTCTGAGAGGTGGAGGATGCCATTGGG 29 2 9 0.11 1 1
.....................................................................................................................................................................................TTGCTCTGAGAGGTGGACGATGCCATTGGT 30 2 10 0.10 1 1
....................................................................................................................................................................................GTTGCTCTGAGAGGTGGACGATGCC...... 25 1 11 0.09 1 1
.................................CTCTCCTGGGAAATATC................................................................................................................................................................. 17 0 13 0.08 1 1

Anti-sense strand reads

gtCtCCCtCtACgtCtAtCttCtCggACgAAgAgAgAggACCCtttAtAgACCttCggCgtgttCAgtgAAgggAAgggCAggACtCCCtCgCgACCCAAggtACgggtCgggCgACgtCtCCgCCgACCCttgAgAtACAggACCCACCggtgtACgggtCggtCCtCAgtCCCCAAgCCAACgAgACCCtCCACCtgCtACggtAACCC

********************************************.............................................................................................................................****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................................................................................................................................CAAGCCAGCGAGACTCTCCACCTGCTACGGT..... 31 2 1 1.00 1 1
...............................................................................................................................................................................CAAGCCAACGAGACTCTCCACCTGCTACGGT..... 31 1 1 1.00 1 1
...............................................................................................................................................................GTCGGTCCTCAGTCCCCAAGCCAACGA......................... 27 0 1 1.00 1 1
....................TCTCGGACGAAGAGAGAGGACCCTTTATA.................................................................................................................................................................. 29 0 2 0.50 1 1
.................................................................................................................CGACGTCTACGACGACCCTTGAGATACAGGA................................................................... 31 2 2 0.50 1 1
.................................................GACCTTCGGCGTGTTC.................................................................................................................................................. 16 0 4 0.25 1 1
........................................................................GGAAGGGCAGGACTCCCTCGCGACCCA................................................................................................................ 27 0 6 0.17 1 1
....................................................................................................................................................................................CAACGAGACCCTCCACCTGCTACGGT..... 26 0 7 0.14 1 1

Generated: 09/01/2015 at 11:47 AM