ID:

eca-mir-8914

 Coordinate:

chr20:15497687-15497827 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-53.5 -53.1 -52.9

Sense Strand Reads

AAAAATCTCCAATGCTTTTGAAGACACTAATGCCATGCTATTTCAGATATGGGTGAAGAAGCGGAGCTCTCGGGACAGAAGGCCAGGCTTTTTGAGCTGTGTTGGTTGTCACGGTTCCTGTTTCGTGAACCACAAGCAGCTCAACAAACTGTGGTCTGTGTTCTCTCCTAAAACCCTTTGCACTTCCCACTTCCTAGTCACCCGCGACGATTCCAGGTGAAAAAAAGGGCCGGCCGTCTCC

***********************************..............(((((((....((((((.....((((.((((.((.(((((..(((((((((..((((..((((((........))))))))))...)))))))))........))))))).)))).))))......))))))................)))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................TTTGAGCTGTGTTGGTTGTCACG................................................................................................................................ 23 0 1 5.00 5 5
..........................................................................................TTTGAGCTGTGTTGGTTGTCACGA............................................................................................................................... 24 1 1 3.00 3 3
..........................................................................................TTTGAGCTGTGTTGGTTGTCAATG............................................................................................................................... 24 2 1 1.00 1 1
................TTTGAAGACACTAATGCCATGCTATTTC..................................................................................................................................................................................................... 28 0 1 1.00 1 1
..........................................................................................TTTGAGCTGTGTTGGTTGTCACGAA.............................................................................................................................. 25 2 1 1.00 1 1
....................................................................................................GTTGGTTGTCACGGTTCCTGTTTCGTGAACC.............................................................................................................. 31 0 1 1.00 1 1

Anti-sense strand reads

TTTTTAGAGGTTACGAAAACTTCTGTGATTACGGTACGATAAAGTCTATACCCACTTCTTCGCCTCGAGAGCCCTGTCTTCCGGTCCGAAAAACTCGACACAACCAACAGTGCCAAGGACAAAGCACTTGGTGTTCGTCGAGTTGTTTGACACCAGACACAAGAGAGGATTTTGGGAAACGTGAAGGGTGAAGGATCAGTGGGCGCTGCTAAGGTCCACTTTTTTTCCCGGCCGGCAGAGG

***********************************..............(((((((....((((((.....((((.((((.((.(((((..(((((((((..((((..((((((........))))))))))...)))))))))........))))))).)))).))))......))))))................)))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:49 AM