ID:

eca-mir-8913

Coordinate:

chr20:39845361-39845485 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.3 -39.2 -39.2

Sense Strand Reads

ttcccagactcccttgcctgttcccaggctcctttgcccttgggcttccaggtagagttggccgatggaggcactggaggaaggctagaggttgggaggaggggagaagccaggtatttcttcctcattttctgcttcaagtggtgtctcttgtcagctcctgagcctcctctgtgatcccagctccctgggttctagctcctgccggatggatttggattttca

****************************************************...(((((((....((((((((((...(((.((.(((((....((((((((((...........))))))))))..))))))))))...)))))))))).)))))))******************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...................................................................GAGGCACTGGAGGAAGGCTAGAGGTTGGG................................................................................................................................. 29 0 1 3.00 3 3
........................................................................................................................TTCCTCATTTTCTGCTTCAAGTGG................................................................................. 24 0 1 2.00 2 2
..............................................TCCAGGTAGAGTTGGCCGATGGAGGCACTG..................................................................................................................................................... 30 0 1 2.00 2 2
.........TCCCTTGCCTGTTCCCAGGCTCCTTTGC............................................................................................................................................................................................ 28 0 1 1.00 1 1
..............................................................................................................................ATTTTCTGCTTCAAGTGGTGTCTCTTGTC...................................................................... 29 0 1 1.00 1 1
.............................................................................................................................................TGGTGTCTCTTGTCAGCTCCTGAGCCT......................................................... 27 0 1 1.00 1 1
........................................................................................................................TTCCTCATTTTCTGCTTCAAGTGGTG............................................................................... 26 0 1 1.00 1 1
.............................................TTCCAGGTAGAGTTGGCCGATGGAGGCACTG..................................................................................................................................................... 31 0 1 1.00 1 1
....................................................................................................................................................TCTTGTCAGCTCCTGAGCCTCCTAATT.................................................. 27 3 1 1.00 1 1
........................................................................................................................TTCCTCATTTTCTGCTTCAAGTGGTGTCT............................................................................ 29 0 1 1.00 1 1
........................................TGGGCTTCCAGGTAGAGTTGGCCGATGGAT........................................................................................................................................................... 30 1 1 1.00 1 1
..................................................................................................................................................TCTCTTGTCAGCTCCTGAGCCTCCTC..................................................... 26 0 1 1.00 1 1
....................................................................................................................................................TCTTGTCAGCTCCTGAGCCTCCTCTGA.................................................. 27 1 1 1.00 1 1

Anti-sense strand reads

ttGGGTgTGtGGGttgGGtgttGGGTggGtGGtttgGGGttgggGttGGTggtTgTgttggGGgTtggTggGTGtggTggTTggGtTgTggttgggTggTggggTgTTgGGTggtTtttGttGGtGTttttGtgGttGTTgtggtgtGtGttgtGTgGtGGtgTgGGtGGtGtgtgTtGGGTgGtGGGtgggttGtTgGtGGtgGGggTtggTtttggTttttGT

******************************************************************...(((((((....((((((((((...(((.((.(((((....((((((((((...........))))))))))..))))))))))...)))))))))).)))))))****************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
........................................................................................................................................................................................AGGGACCCAAGATCGAGGACGGCCTACCT............ 29 0 1 1.00 1 1

Generated: 09/01/2015 at 11:49 AM