ID:

eca-mir-8912

Coordinate:

chr20:42190010-42190126 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-23.9 -23.9 -23.9

Sense Strand Reads

aaagaaGACATAGTAGCACAGCccccctcatgttttagagacgaggaaaactggggctctgaaaggggaagcagtaggtaaatggcagagctgggatttgaacccgagcacactggttccagtctgggctgtcagtctacacaaagcctctgcAGGGGCAGGGACTGGTAGAGGCTCACCGCTCCATCTTTACTCTGGGTGTAGGACACACTGAAAC

*******************************************************************....(((.((((...(((((..(((.(((((.(((((..........))))).))))).))))))))...........)))))))*****************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................TGGCAGAGCTGGGATTTGAACCCGAGCA........................................................................................................... 28 0 1 1.00 1 1
....................................................................................................................TTCCAGTCTGGGCTGTCAGTC................................................................................ 21 0 1 1.00 1 1
..............................................................................TAAATGGCAGAGCTGGGATTTGAAC.................................................................................................................. 25 0 6 0.33 2 2
..............................................................................CAAATGGCAGAGCTGGGATTTGAACCC................................................................................................................ 27 1 19 0.05 1 1
................................................................................AATGGCAGAGCTGGGATTTGAAC.................................................................................................................. 23 0 19 0.05 1 1

Anti-sense strand reads

TTTgTTCTGTATCATCGTGTCGGGGGGtGTtgttttTgTgTGgTggTTTTGtggggGtGtgTTTggggTTgGTgtTggtTTTtggGTgTgGtgggTtttgTTGGGgTgGTGTGtggttGGTgtGtgggGtgtGTgtGtTGTGTTTgGGtGtgGTCCCCGTCCCTGACCATCTCCGAGTGGCGAGGTAGAAATGAGACCCACATCCTGTGTGACTTTG

*****************************************************************....(((.((((...(((((..(((.(((((.(((((..........))))).))))).))))))))...........)))))))*******************************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:49 AM