ID:

eca-mir-8909

 Coordinate:

chr20:34212987-34213077 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.0 -34.9 -34.9

Sense Strand Reads

AGTGTGGTTACTCAACTTCTCAAAGCCATGTCTCCTTTTGGTAAATACACAAATCTCACGCTCCACCTGAAATTCTGATGCACCTCTCAGGTCGGGGGGGAGACCTCCCCACCGCGTGACGAGGCACCATGATGCTCAGGAGGCCTAGACTGCTTGCTCTGCATCCCGCCTGCCAAGGCTTTGCTAAGCTC

***************************************..............(((...(((...(((((.(((.((.(((..((((((.((.(((((((...)))))))...)).))).)))))).)).)))..))))).)))..)))...*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
......................................................CTCACGCTCCACCTGAAATTCTGATGCACC........................................................................................................... 30 0 1 2856.00 2856 2856
...................................................................TGAAATTCTGATGCACCTCTCGGGTC.................................................................................................. 26 1 1 2100.00 2100 2100
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCT.................... 26 0 1 1774.00 1774 1774
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCT.......................................................................................................... 31 0 1 1443.00 1443 1443
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCA................ 30 0 1 1039.00 1039 1039
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTT......................................................................................................... 32 1 1 1021.00 1021 1021
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTC......................................................................................................... 32 0 1 720.00 720 720
.............................................................TCCACCTGAAATTCTGATGCACCTCTC....................................................................................................... 27 0 1 713.00 713 713
........................................................CACGCTCCACCTGAAATTCTGATGCACCTC......................................................................................................... 30 0 1 621.00 621 621
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCC................. 29 0 1 520.00 520 520
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGG.................................................................................................... 30 1 1 496.00 496 496
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACC........................................................................................................... 31 0 1 459.00 459 459
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCT................ 30 1 1 458.00 458 458
........................................................CACGCTCCACCTGAAATTCTGATGCACC........................................................................................................... 28 0 1 329.00 329 329
....................................................................................................................TGACGAGGCACCATGATGCTCAGGAGGCCT............................................. 30 0 1 291.00 291 291
......................................................CTCACGCTCCACCTGAAATTCTGATGCAC............................................................................................................ 29 0 1 262.00 262 262
......................................................CTCACGCTCCACCTGAAATTCTGATGCACT........................................................................................................... 30 1 1 227.00 227 227
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGGA................................................................................................... 31 2 1 215.00 215 215
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGGT................................................................................................... 31 1 1 185.00 185 185
.............................................................TCCACCTGAAATTCTGATGCACCTCT........................................................................................................ 26 0 1 185.00 185 185
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTGCT................................. 29 0 1 183.00 183 183
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGG..................................................................................................... 29 1 1 177.00 177 177
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTTT........................................................................................................ 33 1 1 165.00 165 165
..................................................................CTGAAATTCTGATGCACCTCTCGGGTC.................................................................................................. 27 1 1 165.00 165 165
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCAC............................................................................................................ 30 0 1 137.00 137 137
...................................................................TGAAATTCTGATGCACCTCTCGGGTCT................................................................................................. 27 2 1 135.00 135 135
.............................................................................................................................................GGCCTAGACTGCTTGCTCTGCATCCCGCCT.................... 30 0 1 132.00 132 132
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACT........................................................................................................... 31 1 1 131.00 131 131
........................................................CACGCTCCACCTGAAATTCTGATGCACCT.......................................................................................................... 29 0 1 124.00 124 124
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGG.............................................................................................. 30 1 1 121.00 121 121
......................................................CTCACGCTCCACCTGAAATTCTGATGCA............................................................................................................. 28 0 1 117.00 117 117
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTA......................................................................................................... 32 1 1 117.00 117 117
.............................................................TCCACCTGAAATTCTGATGCACCTCTCG...................................................................................................... 28 1 1 113.00 113 113
........................................................................................................................................CAGGAGGCCTAGACTGCTTGCTCTGCATCC......................... 30 0 1 111.00 111 111
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCA.......................................................................................................... 31 1 1 108.00 108 108
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCTC......................................................................................................... 31 0 1 107.00 107 107
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCT.......................................................................................................... 30 0 1 99.00 99 99
......................................TGGTAAATACACAAATCTCACGCTCCACC............................................................................................................................ 29 0 1 96.00 96 96
......................................................CTCACGCTCCACCTGAAATTCTGATGCACTT.......................................................................................................... 31 1 1 95.00 95 95
...................................................................TGAAATTCTGATGCACCTCTCGGGTCG................................................................................................. 27 1 1 90.00 90 90
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACCT.......................................................................................................... 32 0 1 89.00 89 89
........................................................CACGCTCCACCTGAAATTCTGATGCACCTT......................................................................................................... 30 1 1 88.00 88 88
.............................................................TCCACCTGAAATTCTGATGCACCTC......................................................................................................... 25 0 1 86.00 86 86
.........................................TAAATACACAAATCTCACGCTCCACCTGAAA....................................................................................................................... 31 0 1 86.00 86 86
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTGCTC................................ 30 0 1 86.00 86 86
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCAT............... 31 1 1 82.00 82 82
.......................................................TCACGCTCCACCTGAAATTCTGATGCACC........................................................................................................... 29 0 1 80.00 80 80
......................................................CTCACGCTCCACCTGAAATTCTGATG............................................................................................................... 26 0 1 79.00 79 79
.................................................................CCTGAAATTCTGATGCACCTCTCGGGTC.................................................................................................. 28 1 1 76.00 76 76
......................................TGGTAAATACACAAATCTCACGCTCCACCT........................................................................................................................... 30 0 1 75.00 75 75
......................................................CTCACGCTCCACCTGAAATTCTGAT................................................................................................................ 25 0 1 72.00 72 72
.....................................TTGGTAAATACACAAATCTCACGCTCCACC............................................................................................................................ 30 0 1 70.00 70 70
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGGT............................................................................................. 31 2 1 68.00 68 68
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCC..................... 25 0 1 67.00 67 67
........................................................CACGCTCCACCTGAAATTCTGATGCACCTCT........................................................................................................ 31 0 1 66.00 66 66
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGGG............................................................................................. 31 1 1 63.00 63 63
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCTT............... 31 2 1 60.00 60 60
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCATT.............. 32 2 1 58.00 58 58
AGTGTGGTTACTCAACTTCTCAAAGCC.................................................................................................................................................................... 27 0 1 58.00 58 58
AGTGTGGTTACTCAACTTCTCAAAGCCT................................................................................................................................................................... 28 1 1 57.00 57 57
........................................................CACGCTCCACCTGAAATTCTGATGCAC............................................................................................................ 27 0 1 55.00 55 55
.................................................................CCTGAAATTCTGATGCACCTCTCGGG.................................................................................................... 26 1 1 50.00 50 50
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGA.................................................................................................... 30 2 1 49.00 49 49
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGG............................................................................................... 29 1 1 48.00 48 48
.......................................................................................................................................TCAGGAGGCCTAGACTGCTTGCTCTGCATC.......................... 30 0 1 47.00 47 47
.............................................................TCCACCTGAAATTCTGATGCACCTCTCT...................................................................................................... 28 1 1 47.00 47 47
......................................................CTCACGCTCCACCTGAAATTCTGATGC.............................................................................................................. 27 0 1 43.00 43 43
.......................................................................................................................................TCAGGAGGCCTAGACTGCTTGCTCTGCATCC......................... 31 0 1 41.00 41 41
......................................................CTCACGCTCCACCTGAAATTCTGATGCACTTT......................................................................................................... 32 2 1 41.00 41 41
.........................................TAAATACACAAATCTCACGCTCCACCTGAA........................................................................................................................ 30 0 1 40.00 40 40
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCTT......................................................................................................... 31 1 1 40.00 40 40
..................................................................CTGAAATTCTGATGCACCTCTCGGGTCGGT............................................................................................... 30 2 1 40.00 40 40
...................................................................TGAAATTCTGATGCACCTCTCGGGT................................................................................................... 25 1 1 40.00 40 40
........................................................CACGCTCCACCTGAAATTCTGATGCACCTTT........................................................................................................ 31 1 1 39.00 39 39
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCA.................... 26 1 1 37.00 37 37
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGT.................................................................................................... 30 2 1 35.00 35 35
..........................................................CGCTCCACCTGAAATTCTGATGCACC........................................................................................................... 26 0 1 34.00 34 34
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGGGGGGGA........................................................................................ 36 2 1 33.00 33 33
..............................................................CCACCTGAAATTCTGATGCACCTCTC....................................................................................................... 26 0 1 33.00 33 33
........................................................CACGCTCCACCTGAAATTCTGATGCACT........................................................................................................... 28 1 1 33.00 33 33
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGC.................. 28 0 1 33.00 33 33
.............................................................TCCACCTGAAATTCTGATGCACCTCTT....................................................................................................... 27 1 1 32.00 32 32
...........................................................................................................................................GAGGCCTAGACTGCTTGCTCTGCATCCCGCCT.................... 32 0 1 32.00 32 32
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCA............................................................................................................. 29 0 1 32.00 32 32
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTGCTCT............................... 31 0 1 31.00 31 31
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTCT........................................................................................................ 33 0 1 31.00 31 31
....TGGTTACTCAACTTCTCAAAGCCATGTCTC............................................................................................................................................................. 30 0 1 30.00 30 30
..........................................................................................................................................GGAGGCCTAGACTGCTTGCTCTGCATC.......................... 27 0 1 29.00 29 29
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTGCTT................................ 30 1 1 29.00 29 29
.....................................TTGGTAAATACACAAATCTCACGCTCCACCT........................................................................................................................... 31 0 1 28.00 28 28
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGGTC.................................................................................................. 32 1 1 28.00 28 28
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGGTT............................................................................................ 32 3 1 27.00 27 27
.......................................................TCACGCTCCACCTGAAATTCTGATGCAC............................................................................................................ 28 0 1 27.00 27 27
.......................................................................................................................................TCAGGAGGCCTAGACTGCTTGCTCTGCATCT......................... 31 1 1 26.00 26 26
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACTT.......................................................................................................... 32 1 1 25.00 25 25
........................................................CACGCTCCACCTGAAATTCTGATGCACCTCTT....................................................................................................... 32 1 1 25.00 25 25
..............................................................................................................................................GCCTAGACTGCTTGCTCTGCATCCCGCCT.................... 29 0 1 25.00 25 25
......................................................CTCACGCTCCACCTGAAATTCTGATGCACA........................................................................................................... 30 1 1 25.00 25 25
...............................................................CACCTGAAATTCTGATGCACCTCTC....................................................................................................... 25 0 1 25.00 25 25
.............................................TACACAAATCTCACGCTCCACCTGAAATT..................................................................................................................... 29 0 1 24.00 24 24
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGT.............................................................................................. 30 2 1 23.00 23 23
....................................................................GAAATTCTGATGCACCTCTCGGGTC.................................................................................................. 25 1 1 23.00 23 23
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCAA............... 31 0 1 23.00 23 23
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTTA........................................................................................................ 33 2 1 23.00 23 23
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTTTT....................................................................................................... 34 2 1 23.00 23 23
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCAAG.............. 32 0 1 23.00 23 23
.........................................TAAATACACAAATCTCACGCTCCACCTGAAT....................................................................................................................... 31 1 1 22.00 22 22
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGGTT.................................................................................................. 32 2 1 22.00 22 22
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTT................... 27 1 1 22.00 22 22
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCAT......................................................................................................... 32 2 1 21.00 21 21
................................................................................................................................................CTAGACTGCTTGCTCTGCATCCCGCCT.................... 27 0 1 21.00 21 21
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCAAGT............. 33 1 1 21.00 21 21
................................................................ACCTGAAATTCTGATGCACCTCTCG...................................................................................................... 25 1 1 20.00 20 20
.......................................................TCACGCTCCACCTGAAATTCTGATGCACT........................................................................................................... 29 1 1 20.00 20 20
.................................................................CCTGAAATTCTGATGCACCTCTCGGGTCGGT............................................................................................... 31 2 1 20.00 20 20
.............................................................TCCACCTGAAATTCTGATGCACCTCTA....................................................................................................... 27 1 1 19.00 19 19
.................................................................CCTGAAATTCTGATGCACCTCTCGGGTCGG................................................................................................ 30 1 1 19.00 19 19
.......TTACTCAACTTCTCAAAGCCATGTCTCCTT.......................................................................................................................................................... 30 0 1 19.00 19 19
......................................................CTCACGCTCCACCTGAAATTCTGATGT.............................................................................................................. 27 1 1 19.00 19 19
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCAAT.............. 32 1 1 19.00 19 19
.............................................................TCCACCTGAAATTCTGATGCACC........................................................................................................... 23 0 1 18.00 18 18
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTT.................................... 26 0 1 18.00 18 18
........................................................CACGCTCCACCTGAAATTCTGATGCACCTCTC....................................................................................................... 32 0 1 18.00 18 18
............................................................CTCCACCTGAAATTCTGATGCACCTCTC....................................................................................................... 28 0 1 18.00 18 18
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGGTA.................................................................................................. 32 2 1 17.00 17 17
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGT............................................................................................... 29 2 1 17.00 17 17
.........................................TAAATACACAAATCTCACGCTCCACC............................................................................................................................ 26 0 1 17.00 17 17
...........................................................................................................................................GAGGCCTAGACTGCTTGCTCTGCATCCCGCC..................... 31 0 1 17.00 17 17
.............................................................................................................................................GGCCTAGACTGCTTGCTCTGCATCCC........................ 26 0 1 17.00 17 17
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGT................................................................................................ 28 2 1 17.00 17 17
...........................................................................................................................................GAGGCCTAGACTGCTTGCTCTGCATCC......................... 27 0 1 16.00 16 16
....................................................................................................................................TGCTCAGGAGGCCTAGACTGCTTGCTCTGC............................. 30 0 1 16.00 16 16
...........................................................................................................................................GAGGCCTAGACTGCTTGCTCTGCATCCC........................ 28 0 1 16.00 16 16
...................................................................TGAAATTCTGATGCACCTCGCGGGTC.................................................................................................. 26 2 1 16.00 16 16
.................................................................................................................................................TAGACTGCTTGCTCTGCATACCGCCTGCCA................ 30 1 1 16.00 16 16
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCTCT........................................................................................................ 32 0 1 16.00 16 16
....................................TTTGGTAAATACACAAATCTCACGCTCCACC............................................................................................................................ 31 0 1 16.00 16 16
..............................................................CCACCTGAAATTCTGATGCACCTCTCG...................................................................................................... 27 1 1 16.00 16 16
............................................................CTCCACCTGAAATTCTGATGCACCTC......................................................................................................... 26 0 1 15.00 15 15
................................................................ACCTGAAATTCTGATGCACCTCTC....................................................................................................... 24 0 1 15.00 15 15
...................................................................TGAAATTCTGATGCACCTCTCGGGTCA................................................................................................. 27 2 1 15.00 15 15
.........................................TAAATACACAAATCTCACGCTCCACCTGA......................................................................................................................... 29 0 1 15.00 15 15
..................................................................................................................CGTGACGAGGCACCATGATGCTCAGGAGGCCT............................................. 32 0 1 15.00 15 15
.............................................TACACAAATCTCACGCTCCACCTGAAATTC.................................................................................................................... 30 0 1 14.00 14 14
........................................................CACGCTCCACCTGAAATTCTGATGCACCTA......................................................................................................... 30 1 1 14.00 14 14
.............................................................................................................................................GGCCTAGACTGCTTGCTCTGCATCCCGCC..................... 29 0 1 14.00 14 14
...............................................................CACCTGAAATTCTGATGCACCTCTCG...................................................................................................... 26 1 1 14.00 14 14
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTAT........................................................................................................ 33 1 1 14.00 14 14
......................................................CTCACGCTCCACCTGAAATTCGGATGCACC........................................................................................................... 30 1 1 14.00 14 14
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGG................................................................................................ 28 1 1 14.00 14 14
.............................................................TCCACCTGAAATTCTGATGCACCTCTCA...................................................................................................... 28 0 1 14.00 14 14
......................................................CTCACGCTCCACCTGAAATTCGGATGCACCT.......................................................................................................... 31 1 1 13.00 13 13
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACCTT......................................................................................................... 33 1 1 13.00 13 13
.................................................................................................................................................TAGACTGCTTGCTCTGAATCCCGCCT.................... 26 1 1 13.00 13 13
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTA................... 27 1 1 13.00 13 13
........................................................................................................................................CAGGAGGCCTAGACTGCTTGCTCTGCATC.......................... 29 0 1 13.00 13 13
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGGGT............................................................................................ 32 2 1 13.00 13 13
....................................................................................................................TGACGAGGCACCATGATGCTCAGGAGGCC.............................................. 29 0 1 13.00 13 13
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTCA........................................................................................................ 33 1 1 12.00 12 12
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCT..................................... 25 0 1 12.00 12 12
......................................TGGTAAATACACAAATCTCACGCTCCACCTT.......................................................................................................................... 31 1 1 12.00 12 12
......................................................CTCACGCTCCACCTGAAATTCTGATGCAT............................................................................................................ 29 1 1 12.00 12 12
......................................TGGTAAATACACAAATCTCACGCTCCACCTG.......................................................................................................................... 31 0 1 12.00 12 12
......................................................CTCACGCTCCACCTGAAATACTGATGCACC........................................................................................................... 30 1 1 12.00 12 12
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTTTTT...................................................................................................... 35 3 1 12.00 12 12
AGTGTGGTTACTCAACTTCTCAAAGCCATT................................................................................................................................................................. 30 1 1 12.00 12 12
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCATT........................................................................................................ 33 2 1 12.00 12 12
.........................................................ACGCTCCACCTGAAATTCTGATGCACC........................................................................................................... 27 0 1 12.00 12 12
......................................................CTCACGATCCACCTGAAATTCTGATGCACC........................................................................................................... 30 1 1 12.00 12 12
...........................................................................................................................................GAGGCCTAGACTGCTTGCTCTGCATC.......................... 26 0 1 11.00 11 11
........................................................CACGCTCCACCTGAAATTCTGATGCACCTCTTT...................................................................................................... 33 2 1 11.00 11 11
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCATA.............. 32 2 1 11.00 11 11
..................................................................CTGAAATTCTGATGCACCTCTCGGGTCGGGT.............................................................................................. 31 2 1 11.00 11 11
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTATT....................................................................................................... 34 2 1 11.00 11 11
...................................................................................................................................................GACTGCTTGCTCTGCATCCCGCCT.................... 24 0 1 11.00 11 11
......................................................CTCACGCTCCACCTGAGATTCTGATGCACC........................................................................................................... 30 1 1 11.00 11 11
...................................TTTTGGTAAATACACAAATCTCACGCTCCA.............................................................................................................................. 30 0 1 11.00 11 11
AGTGTGGTTACTCAACTTCTCAAAGCCA................................................................................................................................................................... 28 0 1 11.00 11 11
.........................................TAAATACACAAATCTCACGCTCCACCTGATT....................................................................................................................... 31 2 1 11.00 11 11
.................................................................................................................................................TAGACTGCTTGCGCTGCATCCCGCCT.................... 26 1 1 11.00 11 11
.................................................................CCTGAAATTCTGATGCACCTCTCGGGTCG................................................................................................. 29 1 1 11.00 11 11
.................................................................CCTGAAATTCTGATGCACCTCTCGGGT................................................................................................... 27 1 1 11.00 11 11
............................................................CTCCACCTGAAATTCTGATGCACCTCT........................................................................................................ 27 0 1 11.00 11 11
......................................................CTCACGCTCCACCTGAAATGCTGATGCACC........................................................................................................... 30 1 1 11.00 11 11
...................................................................TGAAATTCTGAGGCACCTCTCGGGTC.................................................................................................. 26 2 1 11.00 11 11
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCTCA........................................................................................................ 32 1 1 11.00 11 11
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGTT............................................................................................. 31 3 1 11.00 11 11
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCG.......................................................................................................... 31 1 1 11.00 11 11
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCAA......................................................................................................... 32 2 1 10.00 10 10
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTG................... 27 0 1 10.00 10 10
........TACTCAACTTCTCAAAGCCATGTCTCCTTT......................................................................................................................................................... 30 0 1 10.00 10 10
.................................................................................................................................................TAGACTGCTTGCTCTGGATCCCGCCT.................... 26 1 1 10.00 10 10
..........................................................CGCTCCACCTGAAATTCTGATGCACCT.......................................................................................................... 27 0 1 10.00 10 10
....................................................ATCTCACGCTCCACCTGAAATTCTGATGCAC............................................................................................................ 31 0 1 10.00 10 10
.............................................................TCCACCTGAAATTCTGATGCACCT.......................................................................................................... 24 0 1 10.00 10 10
......................................................CTCACGCTCCAGCTGAAATTCTGATGCACCT.......................................................................................................... 31 1 1 10.00 10 10
.............................................TACACAAATCTCACGCTCCACCTGAAA....................................................................................................................... 27 0 1 10.00 10 10
......................................................CTCACGCTCCACCTGAAATTCTGGTGCACC........................................................................................................... 30 1 1 10.00 10 10
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCTTTA....................................................................................................... 34 2 1 10.00 10 10
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGGAA.................................................................................................. 32 3 1 10.00 10 10
.......TTACTCAACTTCTCAAAGCCATGTCTCCTTT......................................................................................................................................................... 31 0 1 10.00 10 10
......................................................CTCACGCTCCAGCTGAAATTCTGATGCACC........................................................................................................... 30 1 1 10.00 10 10
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGGA............................................................................................. 31 2 1 10.00 10 10
..................................................................................................................................................AGACTGCTTGCTCTGCATCCCGCCT.................... 25 0 1 10.00 10 10
..................................................................CTGAAATTCTGATGCACCTCTCGGGTCGGG............................................................................................... 30 1 1 10.00 10 10
..........................................................CGCTCCACCTGAAATTCTGATGCACCTC......................................................................................................... 28 0 1 10.00 10 10
AGTGTGGTTACTCAACTTCTCAAAGCCATG................................................................................................................................................................. 30 0 1 10.00 10 10
............................................................CTCCACCTGAAATTCTGATGCACCTCTCGGA.................................................................................................... 31 2 1 10.00 10 10
................................................................................................................................................CTAGACTGCTTGCTCTGCATCCCGCCTGCCT................ 31 1 1 9.00 9 9
......................................................CTCACGCTCCACCTGAAATTCTGATGCACTTTT........................................................................................................ 33 2 1 9.00 9 9
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACA........................................................................................................... 31 1 1 9.00 9 9
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCG................ 30 1 1 9.00 9 9
......................................................................................................................................CTCAGGAGGCCTAGACTGCTTGCTCTGCATC.......................... 31 0 1 9.00 9 9
............................................................................................................................................AGGCCTAGACTGCTTGCTCTGCATCCC........................ 27 0 1 9.00 9 9
.............................................................................................................................ACCATGATGCTCAGGAGGCCTAGACTGCTTT................................... 31 1 1 9.00 9 9
......................................................CTCACGCTCCACCTGAAATTCTGATGCACATT......................................................................................................... 32 2 1 9.00 9 9
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGT.................. 28 1 1 9.00 9 9
............................................................................................................CCACCGCGTGACGAGGCACCATGATGCTC...................................................... 29 0 1 9.00 9 9
........................................................CACGCTCCACCTGAAATTCTGATGCACCTAT........................................................................................................ 31 1 1 9.00 9 9
AGTGTGGTTACTCAACTTCTCAAAGCCATA................................................................................................................................................................. 30 1 1 9.00 9 9
......................................................CTCACGCTCCACCTGAAATTCTGATT............................................................................................................... 26 1 1 9.00 9 9
........................................................................................................................................CAGGAGGCCTAGACTGCTTGCTCTGCATCT......................... 30 1 1 9.00 9 9
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACCTTT........................................................................................................ 34 1 1 9.00 9 9
......................................................CTCACGCTCCACCTGAAATTCTGATA............................................................................................................... 26 1 1 9.00 9 9
..TGTGGTTACTCAACTTCTCAAAGCCATGTC............................................................................................................................................................... 30 0 1 9.00 9 9
............................................................CTCCACCTGAAATTCTGATGCACCTCTCGGT.................................................................................................... 31 2 1 9.00 9 9
..........................................................................................................................................GGAGGCCTAGACTGCTTGCTCTGCATCCCGCC..................... 32 0 1 9.00 9 9
.....................................................TCTCACGCTCCACCTGAAATTCTGATGC.............................................................................................................. 28 0 1 9.00 9 9
.........................................TAAATACACAAATCTCACGCTCCACCTG.......................................................................................................................... 28 0 1 9.00 9 9
..........................................................................................................................................GGAGGCCTAGACTGCTTGCTCTGCATCCCT....................... 30 1 1 9.00 9 9
........................................................CACGCTCCACCTGAAATTCTGATGCACCTTA........................................................................................................ 31 2 1 8.00 8 8
............................TGTCTCCTTTTGGTAAATACACAAATCT....................................................................................................................................... 28 0 1 8.00 8 8
......................................................CTCACGCTCCACCTGAAATTCTGATGCACCGT......................................................................................................... 32 2 1 8.00 8 8
........................................................CACGCTCCACCTGAAATTCTGATGCACCTCA........................................................................................................ 31 1 1 8.00 8 8
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCGGCCT.................... 26 1 1 8.00 8 8
............................................................................................................................................AGGCCTAGACTGCTTGCTCTGCATCCCGCCT.................... 31 0 1 8.00 8 8
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCAT............................................................................................................ 30 1 1 8.00 8 8
......................................TGGTAAATACACAAATCTCACGCTCC............................................................................................................................... 26 0 1 8.00 8 8
..................................................................................................................CGTGACGAGGCACCATGATGCTCAGGAGGCC.............................................. 31 0 1 8.00 8 8
...........TCAACTTCTCAAAGCCATGTCTCCTTTTGGT..................................................................................................................................................... 31 0 1 8.00 8 8
........................................................CACGCTCCACCTGAAATTCTGATGCACCTATT....................................................................................................... 32 2 1 8.00 8 8
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCAGCCT.................... 26 1 1 8.00 8 8
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCTA......................................................................................................... 31 1 1 8.00 8 8
.............................................................TCCACCTGAAATTCTGATGCACCTCTCGGTT................................................................................................... 31 2 1 8.00 8 8
...........................................................GCTCCACCTGAAATTCTGATGCACCTC......................................................................................................... 27 0 1 8.00 8 8
...................................................................TGAAATTCTGATGCACGTCTCGGGTC.................................................................................................. 26 2 1 8.00 8 8
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCATTT............. 33 3 1 8.00 8 8
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCTA............... 31 1 1 8.00 8 8
...................................................................TGAAATTCTGATGCACATCTCGGGTC.................................................................................................. 26 2 1 8.00 8 8
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCTTT........................................................................................................ 32 1 1 8.00 8 8
...................................................................TGAAATTCTGATGCACCTCTCGGGTT.................................................................................................. 26 2 1 8.00 8 8
........................................................CACGCTCCACCTGAAATTCTGATGC.............................................................................................................. 25 0 1 8.00 8 8
...................................................................TGAAATTCTGATGCACCTCACGGGTC.................................................................................................. 26 2 1 8.00 8 8
...................................................................TGAAATTCTGATGCACCTCTCCGGTC.................................................................................................. 26 1 1 8.00 8 8
......................................................CTCACGCTCCACGTGAAATTCTGATGCACC........................................................................................................... 30 1 1 8.00 8 8
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGGGGGTT........................................................................................... 33 3 1 8.00 8 8
......................................................CTCACGCTCCACCTGAGATTCTGATGCACCTT......................................................................................................... 32 2 1 8.00 8 8
........................................................CACGCTCCACCTGAAATTCTGATGCACCA.......................................................................................................... 29 1 1 7.00 7 7
.....................................................TCTCACGCTCCACCTGAAATTCTGATGCACCA.......................................................................................................... 32 1 1 7.00 7 7
......................................................................................................................................................TGCTTGCTCTGCATCCCGCCTGCCAAGGCTT.......... 31 0 1 7.00 7 7
..........................................................................................................................................GGAGGCCTAGACTGCTTGCTCTGCATCC......................... 28 0 1 7.00 7 7
........TACTCAACTTCTCAAAGCCATGTCTCCTTTT........................................................................................................................................................ 31 0 1 7.00 7 7
.....................................................TCTCACGCTCCACCTGAAATTCTGATG............................................................................................................... 27 0 1 7.00 7 7
.................................................................................................................................................TAGACTGCTTGGTCTGCATCCCGCCT.................... 26 1 1 7.00 7 7
.......................................................TCACGCTCCACCTGAAATTCTGATGCA............................................................................................................. 27 0 1 7.00 7 7
......................................................CTCACGCTCCACCTGAAATCCTGATGCACC........................................................................................................... 30 1 1 7.00 7 7
.........................................TAAATACACAAATCTCACGCTCCACCT........................................................................................................................... 27 0 1 7.00 7 7
......................................................CTCACGCTCCACCTGAAATTCTGATGCAA............................................................................................................ 29 1 1 7.00 7 7
......................................................CTCACGCTCCACCTGAAATTCTGATGCATTT.......................................................................................................... 31 2 1 7.00 7 7
...................................................................TGAAATTCTGATGCACCTCTCTGGTC.................................................................................................. 26 1 1 7.00 7 7
...........................................................................................................................................GAGGCCTAGACTGCTTGCTCTGCATCCCG....................... 29 0 1 7.00 7 7
.................................................................CCTGAAATTCTGATGCACCTCTCGG..................................................................................................... 25 1 1 7.00 7 7
....................................................................................................................................TGCTCAGGAGGCCTAGACTGCTTGCTC................................ 27 0 1 7.00 7 7
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCCAAGG............. 33 0 1 7.00 7 7
......................................................CTCACGCTCCACCTGAAATGCTGATGCACCT.......................................................................................................... 31 1 1 7.00 7 7
...................................................................TGAAATTCTGATGCACCTCTCGGGTA.................................................................................................. 26 2 1 7.00 7 7
.........................................................................................................................................................TTGCTCTGCATCCCGCCTGCCAAGG............. 25 0 1 7.00 7 7
...................................................................TGAAATTCTGATGCACCTCTCGGGGC.................................................................................................. 26 2 1 7.00 7 7
.................................................................................................................................................TAGACTGCTTGCTCTGCATGCCGCCT.................... 26 1 1 7.00 7 7
...................................................................TGAAATTCTGATGCGCCTCTCGGGTC.................................................................................................. 26 2 1 7.00 7 7
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGGCT.................... 26 1 1 7.00 7 7
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCG.................... 26 1 1 7.00 7 7
........................................................CACGCTCCACCTGAAATTCTGATGCA............................................................................................................. 26 0 1 7.00 7 7
..TGTGGTTACTCAACTTCTCAAAGCC.................................................................................................................................................................... 25 0 1 7.00 7 7
......................................................CTCACGCTCCACCTGAAATTCCGATGCACC........................................................................................................... 30 1 1 7.00 7 7
........................................................CACGCTCCACCTGAAATTCTGATGCACCATT........................................................................................................ 31 2 1 7.00 7 7
......................................................................................................................................CTCAGGAGGCCTAGACTGCTTGCTCTGCATCT......................... 32 1 1 6.00 6 6
.................................................................................................................................................TAGACTGCTTGCTCTGCATCCCGCCTGCTT................ 30 2 1 6.00 6 6
......................................................CTCACGCTCCACCTGAAATTCTGATGCACTC.......................................................................................................... 31 2 1 6.00 6 6
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTGCTTT............................... 31 1 1 6.00 6 6
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTGTT................................. 29 1 1 6.00 6 6
................................TCCTTTTGGTAAATACACAAATCTCACGCTC................................................................................................................................ 31 0 1 6.00 6 6
....................................................................................................................................TGCTCAGGAGGCCTAGACTGCTTGCTCTGTT............................ 31 2 1 6.00 6 6
.............................................................................................................................................GGCCTAGACTGCTTGCTCTGCATCCCGC...................... 28 0 1 6.00 6 6
...........................................................GCTCCACCTGAAATTCTGATGCACCTCTC....................................................................................................... 29 0 1 6.00 6 6
...................................................................TGAAATTCTGATGCACCTCTCGGGTCGTT............................................................................................... 29 3 1 6.00 6 6
............................TGTCTCCTTTTGGTAAATACACAAATCTC...................................................................................................................................... 29 0 1 6.00 6 6
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTT................................... 27 1 1 6.00 6 6
.................................................................................................................................TGATGCTCAGGAGGCCTAGACTGCTTGC.................................. 28 0 1 6.00 6 6
.......................................................TCACGCTCCACCTGAAATTCTGATGCACCA.......................................................................................................... 30 1 1 6.00 6 6
......................................................CTCACGCTCCACCTGAAATACTGATGCACCT.......................................................................................................... 31 1 1 6.00 6 6

Anti-sense strand reads

TCACACCAATGAGTTGAAGAGTTTCGGTACAGAGGAAAACCATTTATGTGTTTAGAGTGCGAGGTGGACTTTAAGACTACGTGGAGAGTCCAGCCCCCCCTCTGGAGGGGTGGCGCACTGCTCCGTGGTACTACGAGTCCTCCGGATCTGACGAACGAGACGTAGGGCGGACGGTTCCGAAACGATTCGAG

***************************************..............(((...(((...(((((.(((.((.(((..((((((.((.(((((((...)))))))...)).))).)))))).)).)))..))))).)))..)))...*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
................AAGAGTTTCGGTACAGAGGAAAACCATTTATG............................................................................................................................................... 32 0 1 2.00 2 2
.....CCAATGAGTTGAAGAGTTTCGGTA.................................................................................................................................................................. 24 0 1 1.00 1 1
.............................................................................TACGTGGAGAGCCCAGCCCC.............................................................................................. 20 1 1 1.00 1 1
.........................................................................................................................ACCGTGGTACTACGAGTCCTCCGGATCTGACGC..................................... 33 2 1 1.00 1 1
................AAGAGTTTCGGTACAGAGGAAAACCATTTATGTGT............................................................................................................................................ 35 0 1 1.00 1 1
.................AGAGTTTCGGTACAGAGGAAAACCATTT.................................................................................................................................................. 28 0 1 1.00 1 1
................................................TGTTTAGAGTGCGAGGTGGACTTTAAGAC.................................................................................................................. 29 0 1 1.00 1 1
.....................................................................................................................................CGAGTCCTCCGGATCTGACGAACGAGA............................... 27 0 1 1.00 1 1
...............GAAGAGTTTCGGTACAGAGGAAAACCATTTATG............................................................................................................................................... 33 0 1 1.00 1 1
...................................................TTAGAGTGCGAGGTGGACTTTAAGACTACGT............................................................................................................. 31 0 1 1.00 1 1
.....TCAATGAGTTGAAGAGTTTCGGTACAGAGGA........................................................................................................................................................... 31 1 1 1.00 1 1
...........................................................................................................................................................CGAGACGTAGGGCGGACGGTTCCGAAACGATTCGA. 35 0 1 1.00 1 1

Generated: 09/01/2015 at 11:49 AM