ID:

eca-mir-8908m

 Coordinate:

chrX:115862627-115862771 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-46.6 -46.5 -46.5

Sense Strand Reads

GGATTTGATGGGGAAGGTTATGAAATGTAAATTTGCAAGTACAGGGAGATTTGGCCTCTTCTCCACCTTGAGACATTTGTGTGCAGGGCCCTGCCCAGAATGGTGCTGACTACGTAGATTAAGTGTAGTCAGTGCCATCTGGGTAGAGCGATGCTCAACATGAACAACGTTCGGGGTGTCTTTCAGAGCAGGTGTGGGAGTGGAGATTGAGGTGTTGTGGAGCTTCCTGCCTTGACCTCAGGAGG

****************************************************************************...((.(((..((.(((((((((.((((((((((((((.........))))))))))))))))))))))).))..))).)).....*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...........................................................................................TGCCCAGAATGGTGCTGACTACG................................................................................................................................... 23 0 1 28.00 28 28
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGA.................................................................................................. 22 0 1 23.00 23 23
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGT.................................................................................................. 22 1 1 6.00 6 6
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGAAT................................................................................................ 24 2 1 4.00 4 4
..............................................................................................................................AGTCAGTGCCATCTGGGTAGAGT................................................................................................ 23 1 1 1.00 1 1
.........................................................................CATTTGTGTGCAGGGCCC.......................................................................................................................................................... 18 0 1 1.00 1 1
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGAT................................................................................................. 23 1 1 1.00 1 1
..........................................................................ATTTGTGTGCAGGGCCC.......................................................................................................................................................... 17 0 1 1.00 1 1
...........................................................................................TGCCCAGAATGGTGCTGACTACGT.................................................................................................................................. 24 0 1 1.00 1 1
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGAATT............................................................................................... 25 3 1 1.00 1 1
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGAAA................................................................................................ 24 2 1 1.00 1 1
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGAACT............................................................................................... 25 2 1 1.00 1 1
.............................................................................................................................TAGTCAGTGCCATCTGGG...................................................................................................... 18 0 1 1.00 1 1
................................................................................................................................TCAGTGCCATCTGGGTAGAGCTT.............................................................................................. 23 2 1 1.00 1 1
...........................................................................................TGCCCAGAATGGTGCTGACTACGTT................................................................................................................................. 25 1 1 1.00 1 1
..........................................................................................CTGCCCAGAATGGTGCTGACTAA.................................................................................................................................... 23 1 1 1.00 1 1
.............................................................................................................................TAGTCAGTGCCATCTGGGTAGAGT................................................................................................ 24 1 1 1.00 1 1
...........................................................................................TGCCCAGAATGGTGCTGACTACGAA................................................................................................................................. 25 1 1 1.00 1 1
...............................................................................................CAGAATGGTGCTGACTACG................................................................................................................................... 19 0 1 1.00 1 1
.............................................................................................................................TAGTCAGTGCCATCTGGGCAGAA................................................................................................. 23 2 2 0.50 1 1

Anti-sense strand reads

CCTAAACTACCCCTTCCAATACTTTACATTTAAACGTTCATGTCCCTCTAAACCGGAGAAGAGGTGGAACTCTGTAAACACACGTCCCGGGACGGGTCTTACCACGACTGATGCATCTAATTCACATCAGTCACGGTAGACCCATCTCGCTACGAGTTGTACTTGTTGCAAGCCCCACAGAAAGTCTCGTCCACACCCTCACCTCTAACTCCACAACACCTCGAAGGACGGAACTGGAGTCCTCC

***********************************************************************************...((.(((..((.(((((((((.((((((((((((((.........))))))))))))))))))))))).))..))).)).....**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:14 PM