ID:

eca-mir-8908i

 Coordinate:

chrX:115876504-115876648 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.8 -47.8

Sense Strand Reads

TGGGTACAGTCCTTGTGACACTCTTGGGACAGAGATGAAAGGTACTTTTGGGCAGATCCTCCACTTTGAGCCATTCTGTGTGCAGTGCCCTACCCGGTAAGGTAGTGATCACTTAGATGAGGTGTGATCACTGCCTGTCTGGGTGGAGTAACGCACAACAGGAACAATGTTTGGGAGGGTCTTCAGACTGGTGCTTGGGATGGAGATGGATGTGTCCGCGAGGTGATGCCTCCAACTCTGGGGGG

***************************************************************************...(((((..(((.((((((((..(((((((((((((...........)))))))))))))..)))))))).)))..)))))...************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................TACCCGGTAAGGTAGTGATCACT.................................................................................................................................... 23 0 1 160.00 160 160
..........................................................................................TACCCGGTAAGGTAGTGATC....................................................................................................................................... 20 0 1 114.00 114 114
..........................................................................................TACCCGGTAAGGTAGTGATCAC..................................................................................................................................... 22 0 1 40.00 40 40
..........................................................................................TACCCGGTAAGGTAGTGATCA...................................................................................................................................... 21 0 1 8.00 8 8
..........................................................................................TACCCGGTAAGGTAGTGATCACA.................................................................................................................................... 23 1 1 7.00 7 7
..........................................................................................TACCCGGTAAGGTAGTGATCACTT................................................................................................................................... 24 0 1 2.00 2 2
..........................................................................................TACCCGGTAAGGTAGTGATCT...................................................................................................................................... 21 1 1 2.00 2 2
..........................................................................................TACCCGGTAAGGTAGTGATCACTG................................................................................................................................... 24 1 1 2.00 2 2
..........................................................................................TACCCGGTAAGGTAGTGATCAGT.................................................................................................................................... 23 1 1 2.00 2 2
..........................................................................................TACCCGGTAAGGTAGTGATCATA.................................................................................................................................... 23 2 1 2.00 2 2
..........................................................................................TACCCGGTAAGGGAGTGATCACT.................................................................................................................................... 23 1 1 2.00 2 2
..........................................................................................TACCCGGTAAGGTAGTGATCAGA.................................................................................................................................... 23 2 1 2.00 2 2
..........................................................................................TACCCGGTAAGGTAATGATCACT.................................................................................................................................... 23 1 2 1.50 3 3
..........................................................................................TACCCGGTAAGGTAGTGATTACT.................................................................................................................................... 23 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACGT................................................................................................................................... 24 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACTGTT................................................................................................................................. 26 3 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACTTAT................................................................................................................................. 26 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACTTT.................................................................................................................................. 25 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACCA................................................................................................................................... 24 2 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACG.................................................................................................................................... 23 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACAA................................................................................................................................... 24 2 1 1.00 1 1
..........................................................................................TACCCGGTAAGATAGTGATCACT.................................................................................................................................... 23 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGCAGTGATCACT.................................................................................................................................... 23 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCAT..................................................................................................................................... 22 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCAG..................................................................................................................................... 22 1 1 1.00 1 1
..........................................................................................TATCCGGTAAGGTAGTGATC....................................................................................................................................... 20 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTCATCAC..................................................................................................................................... 22 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTAATCAC..................................................................................................................................... 22 1 1 1.00 1 1
..............................................................................................................................ATCACTGCCTGTCTGGGTG.................................................................................................... 19 0 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCACTTAGATGA............................................................................................................................. 30 0 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATGACT.................................................................................................................................... 23 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCAAGA................................................................................................................................... 24 3 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATA....................................................................................................................................... 20 1 1 1.00 1 1
..........................................................................................TACCCGGTAGGGTAGTGATCACT.................................................................................................................................... 23 1 1 1.00 1 1
.............................................................................................CCGGTAAGGTAGTGATCACT.................................................................................................................................... 20 0 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCAA..................................................................................................................................... 22 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTACTGATCACTTGGAA............................................................................................................................... 28 3 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTTATCACT.................................................................................................................................... 23 1 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATCAATTT.................................................................................................................................. 25 2 1 1.00 1 1
..........................................................................................TACCCGGTAAGGTAGTGATAACT.................................................................................................................................... 23 1 1 1.00 1 1
.......................................................................CATTCTGTGTGCAGTGCCC........................................................................................................................................................... 19 0 8 0.88 7 7
......................................................................CCATTCTGTGTGCAGTGCCC........................................................................................................................................................... 20 0 8 0.75 6 6
..........................................................................................TACCCGGTAAGGTATTGATCAC..................................................................................................................................... 22 1 2 0.50 1 1
..........................................................................................TACCCGGTAAGGTAATGATCAGT.................................................................................................................................... 23 2 2 0.50 1 1
..........................................................................................TACCCGGTAAGGTAATGATCAC..................................................................................................................................... 22 1 2 0.50 1 1
..........................................................................................TACCCGGTAAGGGAATGATCACT.................................................................................................................................... 23 2 2 0.50 1 1
..........................................................................................TACCCGGTAAGGGAATGATCAG..................................................................................................................................... 22 3 3 0.33 1 1
......................................................................CCATTCTGTGTGCAGTGCCT........................................................................................................................................................... 20 1 8 0.13 1 1
.........................................................................TTCTGTGTGCAGTGCCC........................................................................................................................................................... 17 0 9 0.11 1 1

Anti-sense strand reads

ACCCATGTCAGGAACACTGTGAGAACCCTGTCTCTACTTTCCATGAAAACCCGTCTAGGAGGTGAAACTCGGTAAGACACACGTCACGGGATGGGCCATTCCATCACTAGTGAATCTACTCCACACTAGTGACGGACAGACCCACCTCATTGCGTGTTGTCCTTGTTACAAACCCTCCCAGAAGTCTGACCACGAACCCTACCTCTACCTACACAGGCGCTCCACTACGGAGGTTGAGACCCCCC

*************************************************************************************...(((((..(((.((((((((..(((((((((((((...........)))))))))))))..)))))))).)))..)))))...*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:17 PM