ID:

eca-mir-7177b

 Coordinate:

chr13:15364471-15364609 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.9 -44.9 -44.8

Sense Strand Reads

GTTCAAGTTCAATGGGTGTTTAAGAGGAATACCCAGCCTCAGGCACAAGCTGCTCATCCATACGaagtgattagtttctccagggcactaggagaccacttggtaaattactttaaccaagcactctaaatggtcccctagtgctctgggaaagttaatctcattcaccttccatggaagagcagattattcctagaaaattgtctgttcacATATGACCAGGCACAGCCCTGATGTGG

******************************************************************..((((((((((.(((((((((((((.(((((((((((.((.....)).)))))).........))))).))))))))))))))))).))))))....*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGG.......................................................................................... 22 0 1 22.00 22 22
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGA......................................................................................... 23 1 1 13.00 13 13
...............................................................................................................................AAGTGGTCCCCTAGTGCTCTGG.......................................................................................... 22 1 1 5.00 5 5
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGAAT....................................................................................... 25 2 1 3.00 3 3
.................................................................................AGGGCACTAGGAGACCACTTGGA....................................................................................................................................... 23 1 1 3.00 3 3
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGT......................................................................................... 23 1 1 3.00 3 3
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGA.......................................................................................... 22 1 2 2.00 4 4
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGT.......................................................................................... 22 1 1 2.00 2 2
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGAAA....................................................................................... 25 1 1 2.00 2 2
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGAA........................................................................................ 24 1 1 2.00 2 2
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGTAAGA..................................................................................... 27 3 1 2.00 2 2
...............................................................................................................................AAGTGGTCCCCTAGTGCTCTGGTA........................................................................................ 24 2 1 1.00 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGTAAT...................................................................................... 26 2 1 1.00 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCT............................................................................................ 20 0 1 1.00 1 1
.................................................................................AGGGCACTAGGAGACCACTTGG........................................................................................................................................ 22 0 1 1.00 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGTATT...................................................................................... 26 3 1 1.00 1 1
...............................................................................................................................AAATGGTCCCCTACTGCTCGGGA......................................................................................... 23 3 1 1.00 1 1
..............................................................CGAAGTGATTAGTTTCGCC.............................................................................................................................................................. 19 1 1 1.00 1 1
...............................................................................................................................AAGTGGTCCCCTAGTGCTCTGGAAA....................................................................................... 25 2 1 1.00 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGAAAAGA.................................................................................... 28 2 1 1.00 1 1
...............................................................................................................................AAGTGGTCCCCTAGTGCTCTGGAAAA...................................................................................... 26 2 1 1.00 1 1
...............................................................................................................................AAGTGGTCCCCTAGTGCTCTGGTAA....................................................................................... 25 2 1 1.00 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGGTA........................................................................................ 24 1 1 1.00 1 1
...............................................................................................................................CAATGGTCCCCTAGTGCTCTGGT......................................................................................... 23 2 1 1.00 1 1
...............................................................................................................................CAATGGTCCCCTAGTGCTCTGG.......................................................................................... 22 1 1 1.00 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCAGGA......................................................................................... 23 2 2 0.50 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGTA......................................................................................... 23 2 2 0.50 1 1
...............................................................................................................................AAGTGGTCCCCTGGTGCTCTGG.......................................................................................... 22 2 2 0.50 1 1
...............................................................................................................................AAATGGACCCCTAGTGCTCAGG.......................................................................................... 22 2 3 0.33 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGAAA........................................................................................ 24 2 4 0.25 1 1
...............................................................................................................................AAATGGTCCCCTAGTGCTCTGCA......................................................................................... 23 2 4 0.25 1 1

Anti-sense strand reads

CAAGTTCAAGTTACCCACAAATTCTCCTTATGGGTCGGAGTCCGTGTTCGACGAGTAGGTATGCTTgtgTttTgtttGtGGTgggGTGtTggTgTGGTGttggtTTTttTGtttTTGGTTgGTGtGtTTTtggtGGGGtTgtgGtGtgggTTTgttTTtGtGTttGTGGttGGTtggTTgTgGTgTttTttGGtTgTTTTttgtGtgttGTGTATACTGGTCCGTGTCGGGACTACACC

***************************************************************************..((((((((((.(((((((((((((.(((((((((((.((.....)).)))))).........))))).))))))))))))))))).))))))....****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:39 AM