ID:

eca-mir-7045

 Coordinate:

chr5:45556471-45556581 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-72.0 -71.9 -71.8

Sense Strand Reads

CCGAGTATAGTTTTAGGGGGCGCGTTGAGACCTGGTGGGGCCCCGGGCTGCGAGTGACAGGCTTTCCTTGAGGTGCTGGCGGCCGGGGGAGGGGGAGTTGCCCGTGGAGACTCGCTCACTCTGGCCCCCCGGCCGCCAGGGCACGGTCATCGTGGAGCGCTGGTGGAAGGTGCCGCTGGCCGGAGAGGGCCGGAATCCGCACCTGCACCGG

***********************************.((.((((((((((((((.(((((((....)))....((.((((((((((((((.(((.(((((.((...)).))))).)))........)))))))))))))).))...))))))))..))).)))).....))).))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
................................................................................................................................................................................TGGCCGGAGAGGGCCGGAATCCGCACC........ 27 0 1 1.00 1 1
................................................................................................GTTGCCCGTGGAGACTCGCTCACTC.......................................................................................... 25 0 1 1.00 1 1
..................................................................................................TGCCCGTGGAGACTCGCTCACCCTGG....................................................................................... 26 1 1 1.00 1 1
...........................................................................CTGGCGGCCGGGGGAGGGGGAGT................................................................................................................. 23 0 1 1.00 1 1

Anti-sense strand reads

GGCTCATATCAAAATCCCCCGCGCAACTCTGGACCACCCCGGGGCCCGACGCTCACTGTCCGAAAGGAACTCCACGACCGCCGGCCCCCTCCCCCTCAACGGGCACCTCTGAGCGAGTGAGACCGGGGGGCCGGCGGTCCCGTGCCAGTAGCACCTCGCGACCACCTTCCACGGCGACCGGCCTCTCCCGGCCTTAGGCGTGGACGTGGCC

***********************************.((.((((((((((((((.(((((((....)))....((.((((((((((((((.(((.(((((.((...)).))))).)))........)))))))))))))).))...))))))))..))).)))).....))).))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:03 PM