ID:

eca-mir-7035

 Coordinate:

chr11:1353795-1353939 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.0 -39.5 -39.3

Sense Strand Reads

GCCGAGCTCCCTGTCGGAGGCAGGGAATGGAGACCCATCTGTAGTCTCTTTTGGGTCTTGCACTTCCCCTGCTCTGGAGGGCATGCTTGTGGGCTACTCTGTTTAGTCTAAAACCCAGCAGAGCTGAAGGTCCTGGTTCTGTGGCTCAGAAGCACATTCCAGGGCTGGGTGGGAGGGCCGGACTATCTCCTGATGCTAGGTTGGTTAGAAGATGACAATAGCCCTTTGAGAACAGGGACTGTGGG

********************************************************************(((((((((((....(((((.((((((((.......((.(((..(((((((...))))..)))..)))..)))))))))).)))))..))))))))).)).......********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...................................................................................TGCTTGTGGGCTACTCTGTTTAGTCTAAAACC.................................................................................................................................. 32 0 1 2.00 2 2
............................................................................................................................................................................................................TTAGAAGATGACAATAGCCCTTTGAGAACAGT......... 32 1 1 2.00 2 2
.....................................TCTGTAGTCTCTTTTGGGTCTTGCACTTCCCCT............................................................................................................................................................................... 33 0 1 1.00 1 1
............................................................................................................................................................................................................TTAGAAGATGACAAGAGCCCTTTGAGAACT........... 30 2 1 1.00 1 1
..................................................................................................................................TCCTGGTTCTGTGGCTCAGAAGCACATTCC..................................................................................... 30 0 1 1.00 1 1
.....................................TCTGTAGTCTCTTTTGGGTCTTGCACTTCCC................................................................................................................................................................................. 31 0 1 1.00 1 1
.........................................................................................................................................................................................TCTCCTGATGCTAGGTTGGGTAGAAG.................................. 26 1 1 1.00 1 1
.................................................................................................................................................................................................TGCTAGGTTGGTTAGAAGATGACAATAGC....................... 29 0 1 1.00 1 1
.........................................................................................TGGGCTACTCTGTTTAGTCTAAAACC.................................................................................................................................. 26 0 1 1.00 1 1
.................................................................................................................................................................................................TGCTAGGTTGGTTAGAAGATGACAATAGCCCT.................... 32 0 1 1.00 1 1
....................................................................................................................................................................................................TAGGTTGGTTAGAAGATGACAATAGCCCTTT.................. 31 0 1 1.00 1 1
.................................................................................................................................................................................................TGCTAGGTTGGTTAGAAGATGACAATAGCCT..................... 31 1 1 1.00 1 1
........................................................................................................................................TTCTGTGGCTCAGAAGCACATTCCAGGGCTT.............................................................................. 31 1 1 1.00 1 1
............................................................................................................................................................................................................TTAGAAGATGACAATAGCCCTTTGAGAACT........... 30 1 1 1.00 1 1
...................................................................................TGCTTGTGGGCTACTCTGTTTAGTCTAAAATT.................................................................................................................................. 32 2 1 1.00 1 1
....................................................................................................................................................................................................TAGGTTGGTTAGAAGATGACAATAGCC...................... 27 0 1 1.00 1 1

Anti-sense strand reads

CGGCTCGAGGGACAGCCTCCGTCCCTTACCTCTGGGTAGACATCAGAGAAAACCCAGAACGTGAAGGGGACGAGACCTCCCGTACGAACACCCGATGAGACAAATCAGATTTTGGGTCGTCTCGACTTCCAGGACCAAGACACCGAGTCTTCGTGTAAGGTCCCGACCCACCCTCCCGGCCTGATAGAGGACTACGATCCAACCAATCTTCTACTGTTATCGGGAAACTCTTGTCCCTGACACCC

**********************************************************************(((((((((((....(((((.((((((((.......((.(((..(((((((...))))..)))..)))..)))))))))).)))))..))))))))).)).......******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:34 AM