ID:

eca-mir-675

 Coordinate:

chr12:30529069-30529141 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-60.1 -59.9 -59.4

Sense Strand Reads

GCTGCTGGGGGCCCAGCCTGCGGACGCGCCGTTCCCACGCGGCACTGCGGCCCAGGGGCTGGCGCGGAGAGGGCCCACAGTGCACTCAGTGACACTGTATGCCTTCACCGCTCAGCCCCTGGGACTGGCACGGCAGACAGGACAGCACCCAGGGGGGTCAAGGGCGCTGGCGA

********************************************.(((((((((((((((((.((((.((((((..(((((((((...))).))))))..)))))).)))))))))))))))).)).))).****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...........................................................TGGCGCGGAGAGGGCCCACAGTGT.......................................................................................... 24 1 1 6.00 6 6
..............................................................................................CTGTATGCCTTCACCGCTCAGC......................................................... 22 0 1 4.00 4 4
...........................................................TGGCGCGGAGAGGGCCCACAGT............................................................................................ 22 0 1 3.00 3 3
..............................................................................................CTGTGTGCCTTCACCGCTCAGC......................................................... 22 1 1 3.00 3 3
...........................................................TGGCGCGGAGAGGGCCCACAGTGTT......................................................................................... 25 2 1 2.00 2 2
...........................................................TGGCGCGGAGAGGGCCCACAGTG........................................................................................... 23 0 1 2.00 2 2
..............................................................................................CTGTGTGCCTTGACCGCTCAGC......................................................... 22 2 1 1.00 1 1
..............................................................CGCGGAGAGGGCCCACAGTGG.......................................................................................... 21 1 1 1.00 1 1
..............................................................................................CTGTATGCCTTCACCGCTCAG.......................................................... 21 0 1 1.00 1 1
..............................................................................................CTGTATGCCTTCACCGCTCAGA......................................................... 22 1 1 1.00 1 1
...................GCGGACGCGCCGTTCCCACGCGGCA................................................................................................................................. 25 0 1 1.00 1 1

Anti-sense strand reads

CGACGACCCCCGGGTCGGACGCCTGCGCGGCAAGGGTGCGCCGTGACGCCGGGTCCCCGACCGCGCCTCTCCCGGGTGTCACGTGAGTCACTGTGACATACGGAAGTGGCGAGTCGGGGACCCTGACCGTGCCGTCTGTCCTGTCGTGGGTCCCCCCAGTTCCCGCGACCGCT

******************************************.(((((((((((((((((.((((.((((((..(((((((((...))).))))))..)))))).)))))))))))))))).)).))).******************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:38 AM