ID:

eca-mir-670

Coordinate:

chr12:8509294-8509393 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.4 -48.2 -48.2

Sense Strand Reads

TTCTGTCAAGTCTTCTGTCAAGAAGATGCCAGTGGAGAAATGCCGCATCCGGTTTAGGGGTGGATCTGACGTCCCTGAGTGTATGTGGTGAACCTGAATTTGCCTTGGGTTTCCTCATATTCATTCAGGAGTGTCAGTTCCCCCTTCACTCACCGTTGGAGAACATTCCTGCAAGCAGAGTCTACCCACTTAGAAGAATG

***********************************......((((....))))..(((((.(((.((((((..((((((((((((.((.((((((((.......)))))))))).))))..))))))))..)))))).))))))))..(((.......)))....***********************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.............................................................................................................TTTCCTCATATTCATTCAGGAGTG................................................................... 24 0 1 13.00 13 13
................................................................................................................CCTCATATTCATTCAGGAGTG................................................................... 21 0 1 1.00 1 1
..............................................................................................................TTCCTCATATTCATTCAGGAGTG................................................................... 23 0 1 1.00 1 1
.............................................................................................................TTTCCTCATATTCATTCAGGAGTGT.................................................................. 25 0 1 1.00 1 1
.............................................................................................................TTTCCTCATATTCATTCAGGAGT.................................................................... 23 0 1 1.00 1 1

Anti-sense strand reads

AAGACAGTTCAGAAGACAGTTCTTCTACGGTCACCTCTTTACGGCGTAGGCCAAATCCCCACCTAGACTGCAGGGACTCACATACACCACTTGGACTTAAACGGAACCCAAAGGAGTATAAGTAAGTCCTCACAGTCAAGGGGGAAGTGAGTGGCAACCTCTTGTAAGGACGTTCGTCTCAGATGGGTGAATCTTCTTAC

***********************************......((((....))))..(((((.(((.((((((..((((((((((((.((.((((((((.......)))))))))).))))..))))))))..)))))).))))))))..(((.......)))....***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:37 AM