ID:

eca-mir-615

 Coordinate:

chr6:70898503-70898599 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-63.8 -63.7 -63.4

Sense Strand Reads

CCCTGTGGAGCCGGCTCGGCCGGCGCTCGCTGCTCCGGAGGATTCCAGCGACGCGGGAGGGGCGGGAGGGGGGTCCCCGGTGCTCGGATCTCGAGGGTGCTTATTGTTCGGTCCGAGCCTGGGTCTCCCTCTCCCCCCCTCCTCAGCCCCTCCGGCTGCTGAGTGAAGGCTGCTCCGGAAAGTTTCCTGCCTGGGCG

*****************************************************.((((((((.((((((((((..(((((.(((((((((..((.(((....))).)).))))))))))))))..))))))))))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................................................................TCCGAGCCTGGGTCTCCCTCT................................................................. 21 0 1 48.00 48 48
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTT................................................................ 22 1 1 18.00 18 18
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTA................................................................ 22 1 1 5.00 5 5
...............................................................................................................TCCGAGCCTGGGTCTCCCT................................................................... 19 0 1 4.00 4 4
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTTA............................................................... 23 2 1 3.00 3 3
...............................................................................................................TCCGAGCCTGGGTCTCCCTC.................................................................. 20 0 1 3.00 3 3
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTG................................................................ 22 1 1 2.00 2 2
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTAT............................................................... 23 2 1 2.00 2 2
...............................................................................................................TCCGAGCCTGGGTCTCCCTCA................................................................. 21 1 1 2.00 2 2
...............................................................................................................TCCGAGCCTGGGTCTCCCTCAA................................................................ 22 2 1 2.00 2 2
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTT.............................................................. 24 3 2 1.50 3 3
...............................................................................................................TCCGAGCCTGGGTCTCCCTAT................................................................. 21 1 1 1.00 1 1
......................................................................................................ATTGTTCGGTCCGAGCCTGGGTCTCCCTCTTTT.............................................................. 33 3 1 1.00 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAA.............................................................. 24 3 2 1.00 2 2
...........................................................................................................TCGGTCCGAGCCTGGGTCTCCCT................................................................... 23 0 1 1.00 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTTCA.............................................................. 24 2 1 1.00 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTTT............................................................... 23 2 1 1.00 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTAA............................................................... 23 2 1 1.00 1 1
.................................................................................................................CGAGCCTGGGTCTCCCTCT................................................................. 19 0 1 1.00 1 1
....................................................................GGGGGTCCCCGGTGCTCGGAT............................................................................................................ 21 0 1 1.00 1 1
...............................................................................................................TCCGAGCCTGGGGCTCCCTCT................................................................. 21 1 1 1.00 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCCT................................................................ 22 2 3 0.67 2 2
...............................................................................................................TCCGAGCCTGGGTCTCCCTAA................................................................. 21 2 3 0.67 2 2
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAG.............................................................. 24 3 2 0.50 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTGA............................................................... 23 2 2 0.50 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTAAA.............................................................. 24 3 2 0.50 1 1
...............................................................................................................TCCGAGCCTGGGTCTCACTCTT................................................................ 22 2 2 0.50 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTCTATT.............................................................. 24 3 3 0.33 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTAG................................................................. 21 2 4 0.25 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTAAA................................................................ 22 3 9 0.11 1 1
...............................................................................................................TCCGAGCCTGGGTCTCCCTAAG................................................................ 22 3 16 0.06 1 1

Anti-sense strand reads

GGGACACCTCGGCCGAGCCGGCCGCGAGCGACGAGGCCTCCTAAGGTCGCTGCGCCCTCCCCGCCCTCCCCCCAGGGGCCACGAGCCTAGAGCTCCCACGAATAACAAGCCAGGCTCGGACCCAGAGGGAGAGGGGGGGAGGAGTCGGGGAGGCCGACGACTCACTTCCGACGAGGCCTTTCAAAGGACGGACCCGC

**************************************************.((((((((.((((((((((..(((((.(((((((((..((.(((....))).)).))))))))))))))..))))))))))))))))))....***************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:05 PM