ID:

eca-mir-544-2

 Coordinate:

chr24:42918692-42918781 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.5 -36.4 -36.3 -36.2

Sense Strand Reads

gtgAGTTGTTGGCTAGAGcagtgtttctcaaactttaaaatgcttctaagattttcatcacctagggatcttgttaaaaggcagattctgattcagggaccaagattctgcatttttagcaagttcccaagtgatgctaacgctactggtcagtggacaacactcggaacagTTCAGGGCTGGAGATTGT

***********************************((..............((..(((((.((.((((.((((((((((.(((((.(((.............))).)))))..)))))))))).)))).)))))))..)).............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.....................................................................CTTGTTAAAAGGCAGATTCTGATTCAGGGACCT........................................................................................ 33 1 1 2.00 2 2
.........................................................................................GATTCAGGGACCAAGATTCTGCATTTTTAGCAAGTTC................................................................ 37 0 1 1.00 1 1
........................................................................................................ATTCTGCATTTTTAGCAAGTTG................................................................ 22 1 3 0.33 1 1
....................................................................TCTTGTTAAAAGGCAGATTCT..................................................................................................... 21 0 18 0.28 5 5
........................................................................................................ATTCTGCATTTTTAGCAAGTTT................................................................ 22 1 4 0.25 1 1
....................................................................TCTTGTTAAAAGGCAGATTC...................................................................................................... 20 0 20 0.10 2 2

Anti-sense strand reads

gtgTCAACAACCGATCTCGTgtgtttGtGTTTGtttTTTTtgGttGtTTgTttttGTtGTGGtTgggTtGttgttTTTTggGTgTttGtgTttGTgggTGGTTgTttGtgGTtttttTgGTTgttGGGTTgtgTtgGtTTGgGtTGtggtGTgtggTGTTGTGtGggTTGTgAAGTCCCGACCTCTAACA

***********************************((..............((..(((((.((.((((.((((((((((.(((((.(((.............))).)))))..)))))))))).)))).)))))))..)).............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:55 AM