ID:

eca-mir-504

 Coordinate:

chrX:110329553-110329635 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-51.2 -51.0 -50.9

Sense Strand Reads

GCATAGAATCACAACTGAAGAGAGAAAATCTGAAGTGCAATGTTGAATCGGCTGCTGTTGGGAGACCCTGGTCTGCACTCTATCTGTATGCTTACTGAAGGGAGCGCAGGGCAGGGTTTCCCATACAGAGGGCACAGGCTACCACCGCATTGCAAAGGTTGATCGGAACTTGATTCCCAAGCC

***********************************...............(((.((((((((((((((((.(((((.((((.((.(((....))).))..)))).))))).)))))))))))).))))..)))...............*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...............................................................GACCCTGGTCTGCACTCTATC................................................................................................... 21 0 1 8.00 8 8
..............................................................AGACCCTGGTCTGCACTCTATCT.................................................................................................. 23 0 1 1.00 1 1
...............................................................GACCCTGGTCTGCACTCTATCTG................................................................................................. 23 0 1 1.00 1 1
..............................................................AGACCCTGGTCTGCACTCTAT.................................................................................................... 21 0 1 1.00 1 1
..............................................................AGACCCTGGTCTGCACTCTATC................................................................................................... 22 0 1 1.00 1 1
...............................................................GACCCTGGTCTGCACTCTATCT.................................................................................................. 22 0 1 1.00 1 1

Anti-sense strand reads

CGTATCTTAGTGTTGACTTCTCTCTTTTAGACTTCACGTTACAACTTAGCCGACGACAACCCTCTGGGACCAGACGTGAGATAGACATACGAATGACTTCCCTCGCGTCCCGTCCCAAAGGGTATGTCTCCCGTGTCCGATGGTGGCGTAACGTTTCCAACTAGCCTTGAACTAAGGGTTCGG

***********************************...............(((.((((((((((((((((.(((((.((((.((.(((....))).))..)))).))))).)))))))))))).))))..)))...............*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:13 PM