ID:

eca-mir-494

 Coordinate:

chr24:42902171-42902251 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.6

Sense Strand Reads

ttttgttttgtttttgtttttttttgtttttttGATCAGTGCTAATCTTCGATACTCGAAGGAGAGGTTGTCCGTGTTGTCTTCTCTTTATTTATGATGAAACATACACGGGAAACCTCTTTTTTAGTATCAAATCCCACCCTGGAGGCACTTCCTGTTCCTGATGCGGCCTTCAGGGAGG

*************************************************.((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.................................................................................................TGAAACATACACGGGAAACCTCT............................................................. 23 0 1 63.00 63 63
.................................................................................................TGAAACATACACGGGAAACCT............................................................... 21 0 1 11.00 11 11
.................................................................................................TGAAACATACACGGGAAACCTC.............................................................. 22 0 1 9.00 9 9
.................................................................................................TGAAACATACACGGGAAACCTCC............................................................. 23 1 1 3.00 3 3
.................................................................................................TGAAACATACACGGGAAACCTT.............................................................. 22 1 1 1.00 1 1
................................................................AGGTTGTCCGTGTTGTCTTCTC............................................................................................... 22 0 1 1.00 1 1
....................................................................................................AACATACACGGGAAACCTCTTT........................................................... 22 0 1 1.00 1 1
.................................................................................................TGAAACATACGCGGGAAACCT............................................................... 21 1 1 1.00 1 1
.................................................................................................TGAAACATACACGGGAAACCTCA............................................................. 23 1 1 1.00 1 1
.................................................................................................TGAAACATACACGGGAAACCTGT............................................................. 23 1 1 1.00 1 1
.................................................................................................TGAAACATACACGGGAAACCTCAA............................................................ 24 2 1 1.00 1 1

Anti-sense strand reads

ttttgttttgtttttgtttttttttgtttttttCTAGTCACGATTAGAAGCTATGAGCTTCCTCTCCAACAGGCACAACAGAAGAGAAATAAATACTACTTTGTATGTGCCCTTTGGAGAAAAAATCATAGTTTAGGGTGGGACCTCCGTGAAGGACAAGGACTACGCCGGAAGTCCCTCC

**********************************************.((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:54 AM