ID:

eca-mir-450b

 Coordinate:

chrX:106948655-106948733 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

TTtTttTGGTTtTgTGTGGGTTGCAtTtTGtTtttGTGtTttttGGttGGTtgttttTTtTTTTTGgttTtTGTTggTGttTtTGTttTtTttGTGTtTTGGGttgtTTTTGgtTggtTtGTTTTGTtTgttTtTTTtGtGttttGGgTtGGGtGtttTtTtggttttTTTttTtGTGG

**********************************************......................................................................................*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.............................................................TTTTGCAATATGTTCCTGAAT................................................................................................. 21 0 1 2583.00 2583 2583
.............................................................TTTTGCAATATGTTCCTGAATA................................................................................................ 22 0 1 570.00 570 570
.............................................................TTTTGCAATATGTTCCTGAATAT............................................................................................... 23 0 1 551.00 551 551
.............................................................TTTTGCAATATGTTCCTGAATAA............................................................................................... 23 1 1 106.00 106 106
.............................................................TTTTGCAATATGTTCCTGAAA................................................................................................. 21 1 1 21.00 21 21
.............................................................TTTTGCAATATGTTCCTGAATATG.............................................................................................. 24 0 1 21.00 21 21
.............................................................TTTTGCAATATGTTCCTGAGT................................................................................................. 21 1 1 20.00 20 20
............................................................TTTTTGCAATATGTTCCTGAAT................................................................................................. 22 0 1 19.00 19 19
.............................................................TTTTGCAATATGTTCCTGAATT................................................................................................ 22 1 1 18.00 18 18
.............................................................TTTTGCAATATGTTCCTGAA.................................................................................................. 20 0 1 15.00 15 15
.............................................................TTTTGCAATATGTTCCGGAAT................................................................................................. 21 1 1 11.00 11 11
.............................................................TTTTGCAATATGTTCCTGACT................................................................................................. 21 1 1 9.00 9 9
.............................................................TTTTGCAATGTGTTCCTGAAT................................................................................................. 21 1 1 9.00 9 9
.............................................................TTTTGCAATATGTTCCTGAATATGT............................................................................................. 25 0 1 6.00 6 6
.............................................................TTTTGCAATATGTTCCTGAATGT............................................................................................... 23 1 1 6.00 6 6
.............................................................TTTTGCAATATGGTCCTGAAT................................................................................................. 21 1 1 6.00 6 6
.............................................................TTTTGCAATATGGTCCTGAATA................................................................................................ 22 1 1 4.00 4 4
.............................................................TTTTGCAATATGTTCCAGAAT................................................................................................. 21 1 1 4.00 4 4
.............................................................TTTTGCAATATGTTCCGGAATAT............................................................................................... 23 1 1 4.00 4 4
.............................................................TTTTGCAATATGTTGCTGAAT................................................................................................. 21 1 1 4.00 4 4
.............................................................TTTTGCAATATGTTCCTGAATATT.............................................................................................. 24 1 1 4.00 4 4
.............................................................TTTTGCAATATGTTCCTGAATAAT.............................................................................................. 24 2 1 3.00 3 3
.............................................................TTTTGCAATATGTTCCTGAATG................................................................................................ 22 1 1 3.00 3 3
.............................................................TTTTGCAATATGGTCCTGAATAT............................................................................................... 23 1 1 3.00 3 3
.............................................................TTTTGCAATATGTTCCTGAATAG............................................................................................... 23 1 1 3.00 3 3
.............................................................TTTTGCGATATGTTCCTGAAT................................................................................................. 21 1 1 3.00 3 3
.............................................................TTTTGCAATATGTTGCTGAATA................................................................................................ 22 1 1 3.00 3 3
.............................................................TTTTGCAATATGATCCTGAAT................................................................................................. 21 1 1 3.00 3 3
.............................................................TTTTGCAATATGTTCC...................................................................................................... 16 0 3 3.00 9 9
.............................................................TTTTGCAATATATTCCTGAAT................................................................................................. 21 1 2 2.50 5 5
.............................................................TTTTGCGATGTGTTCCTGAATAT............................................................................................... 23 2 1 2.00 2 2
.............................................................TTTTGCAATATGCTCCTGAAT................................................................................................. 21 1 1 2.00 2 2
............................................................CTTTTGCAATATGTTCCTGAATAA............................................................................................... 24 2 1 2.00 2 2
.............................................................TTTTGCAATATGTTCCTGAATC................................................................................................ 22 1 1 2.00 2 2
.............................................................TTTTGCAATCTGTTCCTGAAT................................................................................................. 21 1 1 2.00 2 2
.............................................................TTTTGCAGTATGTTCCTGAATA................................................................................................ 22 1 1 2.00 2 2
............................................................TTTTTGCAATATGTTCCTGAATA................................................................................................ 23 0 1 2.00 2 2
.............................................................GTTTGCAATATGTTCCTGAAT................................................................................................. 21 1 1 2.00 2 2
.............................................................TTTTGCAATAGGTTCCTGAATA................................................................................................ 22 1 1 2.00 2 2
.............................................................TGTTGCAATATGTTCCTGAATA................................................................................................ 22 1 1 2.00 2 2
.............................................................TTTTGCAATAAGTTCCTGAAT................................................................................................. 21 1 1 2.00 2 2
.............................................................TTTTGCAATATGTTCCCGAAT................................................................................................. 21 1 1 2.00 2 2
..............................................................TTTGCAATATGTTCCTGAATAT............................................................................................... 22 0 1 2.00 2 2
..............................................................TTTGCAATATGTTCCTGAAT................................................................................................. 20 0 1 2.00 2 2
.............................................................TTTTGCAATATGTTACTGAAT................................................................................................. 21 1 1 2.00 2 2
.............................................................TTTTGCAATATGTTCCTGATTAT............................................................................................... 23 1 1 2.00 2 2
.............................................................TTTTGCAATGTGTTCCTGAATAT............................................................................................... 23 1 1 2.00 2 2
.............................................................TTTTGCAATATGTTCCTGAATATGTAATATA....................................................................................... 31 0 1 2.00 2 2
.............................................................TTTTGCGATATGTTCCTGA................................................................................................... 19 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGACTATG.............................................................................................. 24 1 1 1.00 1 1
..............................................................TTTGCAATATGTTCCTGAATA................................................................................................ 21 0 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGA................................................................................................... 19 0 1 1.00 1 1
............................................................TTTTTGCAATATGTTCCTGAATT................................................................................................ 23 1 1 1.00 1 1
.............................................................TTTTGCAATAGGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
.............................................................TTTTTCAATATGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
.............................................................TGTTGCAATATGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAGTAA............................................................................................... 23 2 1 1.00 1 1
.............................................................TTTTGCAATAGGTTCCTGAATAT............................................................................................... 23 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGCAT................................................................................................. 21 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAATAGA.............................................................................................. 24 2 1 1.00 1 1
.............................................................TTTTGCAATCTGTTCCTGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTTTGCCATATGTTCCTGAGTA................................................................................................ 22 2 1 1.00 1 1
.............................................................TCTTGCAATATGTTCCTGAATA................................................................................................ 22 1 1 1.00 1 1
................................................................................................TATTGGGAACATTTTGCATCC.............................................................. 21 0 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAGTA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAAG................................................................................................. 21 1 1 1.00 1 1
............................................................TTTTTGCAATGTGTTCCTGAAT................................................................................................. 22 1 1 1.00 1 1
.............................................................ATTTGCAATATGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
.............................................................TTTTGCAATATATTCCTGAATAT............................................................................................... 23 1 1 1.00 1 1
.............................................................TTTTGCAATATCTTCCTGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAGTAT............................................................................................... 23 1 1 1.00 1 1
.............................................................TTTTGCAATATGGTCCTGAATATG.............................................................................................. 24 1 1 1.00 1 1
.............................................................TTTTGCAATACGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
............................................................TTTTTGCAATATGTTCCTGAAA................................................................................................. 22 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAATCTGT............................................................................................. 25 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAATAAA.............................................................................................. 24 2 1 1.00 1 1
.............................................................TCTTGCAATATGTTCCTGAATAT............................................................................................... 23 1 1 1.00 1 1
.............................................................TTTTGCCATATGTTCCTGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAAAT................................................................................................ 22 2 2 1.00 2 2
.............................................................TTTTGCAATATGTTCCTGAATATGTAATATT....................................................................................... 31 1 1 1.00 1 1
............................................................CTTTTGCAATATGTTCCTGAAT................................................................................................. 22 1 1 1.00 1 1
.............................................................TTTTGCAATATATTCCTGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAATATGTAATA......................................................................................... 29 0 1 1.00 1 1
...............................................................TTGCAATATGTTCCTGAATAT............................................................................................... 21 0 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAG.................................................................................................. 20 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCTGAATTT............................................................................................... 23 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTACTGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTTTGCAATATGTTCCGGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TCTTGCAATATGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
.............................................................TTTTCCAATATGTTCCTGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTTTGCAATTTGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
...................................................................................TGTAATATAAGTGTATTGGGAACATTTTGCATCCT............................................................. 35 1 1 1.00 1 1
.............................................................TTTTGCAATATGATCCTGAATAT............................................................................................... 23 1 1 1.00 1 1
.............................................................TTTTGCAATTTGTTCCTGAATA................................................................................................ 22 1 1 1.00 1 1
.............................................................TTATGCAATATGTTCCTGAAT................................................................................................. 21 1 1 1.00 1 1
...............................................................TTGCAATATGTTCCTGAAT................................................................................................. 19 0 1 1.00 1 1
.............................................................TTTTGCGATGTGTTCCTGAAT................................................................................................. 21 2 8 0.63 5 5
.............................................................CTTTGCAATATGTTCCTGAAT................................................................................................. 21 1 2 0.50 1 1
.............................................................TTTTGCAATATGTTCCTGAAC................................................................................................. 21 1 2 0.50 1 1
.............................................................TTTTGCAATATCTTCCTGAAT................................................................................................. 21 1 2 0.50 1 1
.............................................................TTTTGCAATATTTTCCTGAAT................................................................................................. 21 1 4 0.50 2 2
.............................................................TTTTGCAATATGTTCCTGATT................................................................................................. 21 1 2 0.50 1 1
.............................................................TTTTGCAATATGTTCCTGAT.................................................................................................. 20 1 2 0.50 1 1
.............................................................TTTTGCACTATGTTCCTGAAT................................................................................................. 21 1 2 0.50 1 1
.............................................................TTTTGCAATATGGTCCTGAA.................................................................................................. 20 1 2 0.50 1 1
.............................................................TTTTGCGATGTGTTCCTGAATA................................................................................................ 22 2 2 0.50 1 1
.............................................................TTTTGCTATATGTTCCTGAAT................................................................................................. 21 1 2 0.50 1 1
.............................................................TTTTGCAAAATGTTCCTGAATA................................................................................................ 22 1 2 0.50 1 1
.............................................................TTCTGCAATATGTTCCTGAAT................................................................................................. 21 1 4 0.50 2 2
.............................................................TTTTGCAATATGTTCCTGAATAAAA............................................................................................. 25 3 3 0.33 1 1
.............................................................TTTTGCAATATGTTCCTGAATGA............................................................................................... 23 2 3 0.33 1 1
.............................................................TTTTGAAATATGTTCCTGAAT................................................................................................. 21 1 3 0.33 1 1
.............................................................TTTTGCCATGTGTTCCTGAATA................................................................................................ 22 2 4 0.25 1 1
.............................................................TTTTGCAATGTGTTCCTGAGTAT............................................................................................... 23 2 4 0.25 1 1
.............................................................TTTTGCAATATGGTACTGAAT................................................................................................. 21 2 5 0.20 1 1
.............................................................TTTTGCAATATGTTACGGAAT................................................................................................. 21 2 5 0.20 1 1
.............................................................TTTTGCGATATGTTCCTGAGT................................................................................................. 21 2 6 0.17 1 1
.............................................................TTTTGCAATATGTTCCTGT................................................................................................... 19 1 6 0.17 1 1
.............................................................TTTTGCAATATGGTGCTGAATA................................................................................................ 22 2 6 0.17 1 1
.............................................................TTTTGCAATATGGTGCTGAAT................................................................................................. 21 2 9 0.11 1 1
.............................................................TTTTGCCATATGTTCCTGACT................................................................................................. 21 2 12 0.08 1 1

Anti-sense strand reads

AAtAttACCAAtAgACACCCAACGTtAtACtAtttCACtAttttCCttCCAtgttttAAtAAAAACgttAtACAAggACttAtACAttAtAttCACAtAACCCttgtAAAACgtAggtAtCAAAACAtAgttAtAAAtCtCttttCCgAtCCCtCtttAtAtggttttAAAttAtCACC

***********************************************......................................................................................********************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:13 PM