ID:

eca-mir-425

 Coordinate:

chr16:38001590-38001732 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.0 -33.9 -33.6

Sense Strand Reads

TAGCTGAAGTCCTCAGCCTCGGCCTCCGGTCCCCAATTCTGTTAACAGCTGTCCCCGGGTCGTGCGCCTGCGGCATGGAAAGCGCTTTGGAATGACACGATCACTCCCGTTGAGTGGGCACACAAGAAGCCATCGGGAATATCGTGTCCGCCCAGTGCTCTTTCGGCGCCTCCCAGCAGGACCTTGAGGCCCTGACCCAGAAAGGGGCCTTGCCAAATTTTTCCTGCCCCTAGGATCCCCTAC

***************************************************************************..(((((.((.((((...((((((((...(((((....((((............)))))))))..))))))))...)))).)).)))))...**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................AATGACACGATCACTCCCGTTG................................................................................................................................... 22 0 1 343.00 343 343
..........................................................................................AATGACACGATCACTCCCGTTGAGT................................................................................................................................ 25 0 1 293.00 293 293
...........................................................................................ATGACACGATCACTCCCGTTGAGT................................................................................................................................ 24 0 1 78.00 78 78
..........................................................................................AATGACACGATCACTCCCGTTGAG................................................................................................................................. 24 0 1 49.00 49 49
..........................................................................................AATGACACGATCACTCCCGTTGT.................................................................................................................................. 23 1 1 41.00 41 41
..........................................................................................AATGACACGATCACTCCCGTTGA.................................................................................................................................. 23 0 1 36.00 36 36
..................................................................................................................................CATCGGGAATATCGTGTCCGCCT.......................................................................................... 23 1 1 28.00 28 28
..........................................................................................AATGACACGATCACTCCCGTTGAT................................................................................................................................. 24 1 1 24.00 24 24
..........................................................................................AATGACACGATCACTCCCGTTGAGAT............................................................................................................................... 26 2 1 24.00 24 24
..........................................................................................CATGACACGATCACTCCCGTTG................................................................................................................................... 22 1 1 18.00 18 18
...........................................................................................ATGACACGATCACTCCCGTTGAG................................................................................................................................. 23 0 1 18.00 18 18
...........................................................................................ATGACACGATCACTCCCGTTG................................................................................................................................... 21 0 1 18.00 18 18
..........................................................................................AATGACACGATCACTCCCGTTGAGTAT.............................................................................................................................. 27 2 1 17.00 17 17
..........................................................................................AATGACACGATCACTCCCGTTGAGA................................................................................................................................ 25 1 1 15.00 15 15
..........................................................................................AATGACACGATCACTCCCGTTGAGTGGGC............................................................................................................................ 29 0 1 11.00 11 11
..................................................................................................................................CATCGGGAATATCGTGTCCGCC........................................................................................... 22 0 1 11.00 11 11
..........................................................................................CATGACACGATCACTCCCGTTGAGT................................................................................................................................ 25 1 1 9.00 9 9
...........................................................................................ATGACACGATCACTCCCGTTGAGAT............................................................................................................................... 25 2 1 7.00 7 7
...........................................................................................ATGACACGATCACTCCCGTTGA.................................................................................................................................. 22 0 1 7.00 7 7
...........................................................................................ATGACACGATCACTCCCGTTGAT................................................................................................................................. 23 1 1 6.00 6 6
...........................................................................................ATGACACGATCACTCCCGTTGAGTAT.............................................................................................................................. 26 2 1 6.00 6 6
..........................................................................................AATGACACGATCACTCCCGTTGAGTT............................................................................................................................... 26 1 1 6.00 6 6
..........................................................................................AATGACACGATCACTCCCGTTGAA................................................................................................................................. 24 1 1 4.00 4 4
..........................................................................................AATGACACGATCACTCCCGTT.................................................................................................................................... 21 0 1 4.00 4 4
...........................................................................................ATGACACGATCACTCCCGTTGAGA................................................................................................................................ 24 1 1 4.00 4 4
...................................................................................................................................ATCGGGAATATCGTGTCCGCC........................................................................................... 21 0 1 4.00 4 4
...................................................................................................................................ATCGGGAATATCGTGTCCGCCT.......................................................................................... 22 1 1 4.00 4 4
..........................................................................................AATGACACGATCACTCCCGTTGAGTGGGCT........................................................................................................................... 30 1 1 4.00 4 4
..........................................................................................CATGACACGATCACTCCCGTTGAG................................................................................................................................. 24 1 1 4.00 4 4
..........................................................................................AATGACACGATCACTCCCGT..................................................................................................................................... 20 0 1 3.00 3 3
.....................................................................................CGTGGAATGACACGATCACTCCCGTTGAGT................................................................................................................................ 30 2 1 3.00 3 3
...........................................................................................CTGACACGATCACTCCCGTTGAGT................................................................................................................................ 24 1 1 3.00 3 3
..........................................................................................AATGACACGATCACTCCCGGTG................................................................................................................................... 22 1 1 3.00 3 3
..........................................................................................CATGACACGATCACTCCCGTTGA.................................................................................................................................. 23 1 1 3.00 3 3
...........................................................................................ATGACACGATCACTCCCGTTGT.................................................................................................................................. 22 1 1 3.00 3 3
...........................................................................................ATGACACGATCACTCCGGTTGAGT................................................................................................................................ 24 1 1 2.00 2 2
.................................................................................................................................................................TTCGGCGCCTCCCAGCAGGACCTTGAGGCC.................................................... 30 0 1 2.00 2 2
..........................................................................................CATGACACGATCACTCCCGTTGAGA................................................................................................................................ 25 2 1 2.00 2 2
..................................................................................................................................CATCGGGAATATCGTGTCCGC............................................................................................ 21 0 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTAAGT................................................................................................................................ 25 1 1 2.00 2 2
..........................................................................................AATGACACGATCACTCACGTTG................................................................................................................................... 22 1 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTGAGTGG.............................................................................................................................. 27 0 1 2.00 2 2
...........................................................................................CTGACACGATCACTCCCGTTGAG................................................................................................................................. 23 1 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTGATT................................................................................................................................ 25 1 1 2.00 2 2
....................................TTCTGTTAACAGCTGTCCCCGGG........................................................................................................................................................................................ 23 0 1 2.00 2 2
..........................................................................................AATGACACGATCACTCGCGTTG................................................................................................................................... 22 1 1 2.00 2 2
...........................................................................................ATGACACGATCACTCCCGTTGAGATT.............................................................................................................................. 26 3 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTGAGAC............................................................................................................................... 26 2 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTT................................................................................................................................... 22 1 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTGAGAAT.............................................................................................................................. 27 3 1 2.00 2 2
......................................................................................GTGGAATGACACGATCACTCCCGTTGAGT................................................................................................................................ 29 1 1 2.00 2 2
...................................................................................................................................ATCGGGAATATCGTGTCCGCCC.......................................................................................... 22 0 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTGAGATT.............................................................................................................................. 27 3 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGATG................................................................................................................................... 22 1 1 2.00 2 2
............................................................................................TGACACGATCACTCCCGTTGAGTGGGCT........................................................................................................................... 28 1 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTGAGC................................................................................................................................ 25 1 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTGAAC................................................................................................................................ 25 2 1 2.00 2 2
..................................................................................................................................CATCGGGAATATCGTGTCCGCT........................................................................................... 22 1 1 2.00 2 2
..........................................................................................CATGACACGATCACTCCCGTTGAT................................................................................................................................. 24 2 1 2.00 2 2
....................................TTCTGTTAACAGCTGTCCCCGGGTC...................................................................................................................................................................................... 25 0 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGCTGAGT................................................................................................................................ 25 1 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGTTC................................................................................................................................... 22 1 1 2.00 2 2
..........................................................................................AATGACACGATCGCTCCCGTTGT.................................................................................................................................. 23 2 1 2.00 2 2
....................................TTCTGTTAACAGCTGTCCCCGGGA....................................................................................................................................................................................... 24 1 1 2.00 2 2
..................................................................................................................................CATCGGGAATATCGTGTCCGCCA.......................................................................................... 23 1 1 2.00 2 2
..........................................TAACAGCTGTCCCCGGGTCGTGCGCCT.............................................................................................................................................................................. 27 0 1 2.00 2 2
..........................................................................................AATGACACGATCACTCCCGCTGA.................................................................................................................................. 23 1 1 2.00 2 2
...........................................................................................ATGACACGATCACTCCCGTTGAA................................................................................................................................. 23 1 1 1.00 1 1
...........................................................................................ATGACACGATAACTCCCGTTGAGT................................................................................................................................ 24 1 1 1.00 1 1
......................CCTCCGGTCCCCAATTCTGTTAACAGCT................................................................................................................................................................................................. 28 0 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGCTGAGA................................................................................................................................ 25 2 1 1.00 1 1
..........................................................................................AATGACCCGTTCACTCCCGTTGAGT................................................................................................................................ 25 2 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGACCGCC........................................................................................... 22 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTTTT............................................................................................................................. 28 3 1 1.00 1 1
....................................TTCTGTTAACAGCTGTCCCCGGAAA...................................................................................................................................................................................... 25 3 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCGCCC.......................................................................................... 23 0 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGATGAGTGGGC............................................................................................................................ 29 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGGTGA.................................................................................................................................. 23 1 1 1.00 1 1
..........................................................................................AATGACACGGTCACTCCCGTTGAGTAT.............................................................................................................................. 27 3 1 1.00 1 1
..........................................................................................AATGACACGAGCACTCCCGTTGT.................................................................................................................................. 23 2 1 1.00 1 1
.............................TCCCCAATTCTGTTAACAGGTGTCCCC........................................................................................................................................................................................... 27 1 1 1.00 1 1
..........................................................................................AATGACACGATGACTCCCGTTGAGT................................................................................................................................ 25 1 1 1.00 1 1
..........................................................................................AATGACGCGATCACTCCCGGTGAG................................................................................................................................. 24 2 1 1.00 1 1
...........................................................................................ATGACACGATCGCTCCCGTTG................................................................................................................................... 21 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCGCGTTGAT................................................................................................................................. 24 2 1 1.00 1 1
..........................................................................................AATGACACGGTCACTCCCGGTG................................................................................................................................... 22 2 1 1.00 1 1
..................................................................................................................................CATCGGGAATAGCGTGTCCGCCT.......................................................................................... 23 2 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGATGAGT................................................................................................................................ 25 1 1 1.00 1 1
...........................................................................................ATGACACGATCATTCCCGTTGAGT................................................................................................................................ 24 1 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCGA............................................................................................ 21 1 1 1.00 1 1
..................................................................................CGCTTTGGAATGACACGATCACTCCCA...................................................................................................................................... 27 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAAGT............................................................................................................................... 26 3 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTA............................................................................................................................... 26 1 1 1.00 1 1
.................................CAATTCTGTTAACAGCTGTCCCCGGGT....................................................................................................................................................................................... 27 0 1 1.00 1 1
.............................................................................................................TTGAGTGGGCACACAAGAAGCCATCGGGAA........................................................................................................ 30 0 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTGGT............................................................................................................................. 28 1 1 1.00 1 1
...........................................................................................................................................TATCGTGTCCGCCCAGTGCTCTTTCGGCGT.......................................................................... 30 1 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCTCC........................................................................................... 22 1 1 1.00 1 1
..........................................................................................AATGAGACGATCACTCCCGTTG................................................................................................................................... 22 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTTC.............................................................................................................................. 27 2 1 1.00 1 1
...........................................................................................ATGACACGATCACTCCCGTTGAGAAT.............................................................................................................................. 26 3 1 1.00 1 1
.............................................................................................................................................TCGTGTCCGCCCAGTGCTCTTTCGGCGCC......................................................................... 29 0 1 1.00 1 1
....................................TTCTGTTAACAGCTGTCCCCGGGTA...................................................................................................................................................................................... 25 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGAA............................................................................................................................... 26 2 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGGTGAGA................................................................................................................................ 25 2 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCGCTT.......................................................................................... 23 2 1 1.00 1 1
..........................................................................................CATGACACGATCACTACCGTTGAGT................................................................................................................................ 25 2 1 1.00 1 1
..........................................................................................AATGACGCGATCACTCCCGTTG................................................................................................................................... 22 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCG...................................................................................................................................... 19 0 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTTAGTAT.............................................................................................................................. 27 3 1 1.00 1 1
..........................................................................................AATGACACGATCGCTCCCGTTGAGTG............................................................................................................................... 26 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGG................................................................................................................................ 25 1 1 1.00 1 1
........................TCCGGTCCCCAATTCTGTTAACAGCTGA............................................................................................................................................................................................... 28 1 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCGCG........................................................................................... 22 1 1 1.00 1 1
........................TCCGGTCCCCAATTCTGTTAACAGCT................................................................................................................................................................................................. 26 0 1 1.00 1 1
..........................................................................................AATGACACGATCGCTCCCGTTGAGTT............................................................................................................................... 26 2 1 1.00 1 1
...........................................................................................CTGACACGATCACTCCCGTTGAGTT............................................................................................................................... 25 2 1 1.00 1 1
..................................................................................................................................................................................................................TGCCAAATTTTTCCTGCCCCTAGGATC...... 27 0 1 1.00 1 1
....................................TTCTGTTAACAGCTGTCCCCGGGTCGTGC.................................................................................................................................................................................. 29 0 1 1.00 1 1
.................................................................................................................................CCATCGGGAATATCGTGTCCGC............................................................................................ 22 0 1 1.00 1 1
........................TCCGGTCCCCAATTCTGTTAACAGCTGTA.............................................................................................................................................................................................. 29 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTGCCGTTGAGT................................................................................................................................ 25 1 1 1.00 1 1
..........................................................................................AATGACACGATAACTCCCGTTGT.................................................................................................................................. 23 2 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGATGT.................................................................................................................................. 23 2 1 1.00 1 1
..................................................................................................................................CATCGGGAAGATCGTGTCCGCCT.......................................................................................... 23 2 1 1.00 1 1
..........................CGGTCCCCAATTCTGTTAACAGCTGTCC............................................................................................................................................................................................. 28 0 1 1.00 1 1
..................................................................................................................................CATCGGGAATAACGTGTCCGCC........................................................................................... 22 1 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCATTGAGTAT.............................................................................................................................. 27 3 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTTAT............................................................................................................................. 28 3 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCGTTA.......................................................................................... 23 3 1 1.00 1 1
..........................................................................................CATGACACGATCACTCCCGTTGAGTT............................................................................................................................... 26 2 1 1.00 1 1
..........................................................................................AATGACACGATGACTCCCGTTT................................................................................................................................... 22 2 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTG............................................................................................................................... 26 0 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTGGGCA........................................................................................................................... 30 0 1 1.00 1 1
.................................................................................................................................CCATCGGGAATATCGTGTCCGT............................................................................................ 22 1 1 1.00 1 1
.............................................................................................................................................TCGTGTCCGCCCAGTGCTCTTTCGGCGC.......................................................................... 28 0 1 1.00 1 1
..........................................................................................AATGACACGATCCCTCCCGTTG................................................................................................................................... 22 1 1 1.00 1 1
...........................................................................................ATGACACGATCATTCCCGTTGT.................................................................................................................................. 22 2 1 1.00 1 1
.....................................TCTGTTAACAGCTGTCCCCGGGTCT..................................................................................................................................................................................... 25 1 1 1.00 1 1
...........................................................................................ATGACACGATCACTCCCGTTGAGTGGGC............................................................................................................................ 28 0 1 1.00 1 1
..........................................................................................AATGACACGGTCACTCCCGTTGAGAT............................................................................................................................... 26 3 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGCT............................................................................................................................... 26 2 1 1.00 1 1
..........................................................................................CATGACACGATCGCTCCCGTTGT.................................................................................................................................. 23 3 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGGTGAGT................................................................................................................................ 25 1 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCGCCG.......................................................................................... 23 1 1 1.00 1 1
.............................TCCCCAATTCTGTTAACAGCTGTCCCCGG......................................................................................................................................................................................... 29 0 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCTGTTGAGA................................................................................................................................ 25 2 1 1.00 1 1
...........................................................................................ATGACACGATCACTCCCGTTGAGAAA.............................................................................................................................. 26 3 2 1.00 2 2
..........................................................................................CATGACACGATCACTCCCGTTGT.................................................................................................................................. 23 2 1 1.00 1 1
..........................................................................................AATGACACGATCACGCCCGTTGAGT................................................................................................................................ 25 1 1 1.00 1 1
...........................................................................................ATGACACGATCACTCCCGTTGAGTT............................................................................................................................... 25 1 1 1.00 1 1
........................TCCGGTCCCCAATTCTGTTAACAGCTGT............................................................................................................................................................................................... 28 0 1 1.00 1 1
..................................................................................................................................CATCGGGAATATGGTGTCCGCCT.......................................................................................... 23 2 1 1.00 1 1
...................................................................................................................................ATCGGGAATATCGTGTCCGCCCTTT....................................................................................... 25 2 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAGTTCT............................................................................................................................. 28 3 1 1.00 1 1
..................................................................................................................................CATCGGGAATATCGTGTCCGCCTTGA....................................................................................... 26 3 1 1.00 1 1
...........................................................................................ATGACACGATCACTTCCGTTGAGT................................................................................................................................ 24 1 1 1.00 1 1
..........................................................................................CATGACACGATCACTCCCGTTGAGC................................................................................................................................ 25 2 1 1.00 1 1
...........................................................................................ATGACACGATCAGTCCCGTTGGG................................................................................................................................. 23 2 1 1.00 1 1
.................................................................................................................................................................................AGGACCTTGAGGCCCTGACCCAGAAAGGGGCCTAT............................... 35 2 1 1.00 1 1
...........................................................................................ATGACACGATCAGTCCCGTTGAGT................................................................................................................................ 24 1 1 1.00 1 1
..........................................................................................AATGACACGATCGCTCCCGTTG................................................................................................................................... 22 1 1 1.00 1 1
..........................................................................................AATGACCCGATCACTCCCGGTGAGT................................................................................................................................ 25 2 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGATGA.................................................................................................................................. 23 1 1 1.00 1 1
..........................................................................................AATGACACGATCATTCCCGTTGAT................................................................................................................................. 24 2 1 1.00 1 1
..........................................................................................AATGACACGATGACTCCCGTTGT.................................................................................................................................. 23 2 1 1.00 1 1
...........................................................................................ATGACAGGAGCACTCCCGTTGAGT................................................................................................................................ 24 2 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGTTGAAT................................................................................................................................ 25 1 1 1.00 1 1
.............................................................................................................................................TCGTGTCCGCCCAGTGCTCTTTCGGCGCCT........................................................................ 30 0 1 1.00 1 1
..........................................................................................AATGACACGATCACTCCCGAAGT.................................................................................................................................. 23 3 2 0.50 1 1
..................................................................................................................................CATCGGGAAAATCGTGTCCACC........................................................................................... 22 2 2 0.50 1 1

Anti-sense strand reads

ATCGACTTCAGGAGTCGGAGCCGGAGGCCAGGGGTTAAGACAATTGTCGACAGGGGCCCAGCACGCGGACGCCGTACCTTTCGCGAAACCTTACTGTGCTAGTGAGGGCAACTCACCCGTGTGTTCTTCGGTAGCCCTTATAGCACAGGCGGGTCACGAGAAAGCCGCGGAGGGTCGTCCTGGAACTCCGGGACTGGGTCTTTCCCCGGAACGGTTTAAAAAGGACGGGGATCCTAGGGGATG

****************************************************************************..(((((.((.((((...((((((((...(((((....((((............)))))))))..))))))))...)))).)).)))))...*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
....................CCGGAGGCCAGGGGTTAAGACAATTGT.................................................................................................................................................................................................... 27 0 1 1.00 1 1

Generated: 09/01/2015 at 11:44 AM