ID:

eca-mir-376b

 Coordinate:

chr24:42911856-42911937 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-32.0 -31.9 -31.9

Sense Strand Reads

CTTTGATGAACCACGCACAGATTTGTCCTTTCCAGAACTCAGTCCTTCTTTGGTATTTAAAAGGTGGATATTCCTTCTATGTTTACGTGATTCATAGATAATCATAGAGGAAAATCCATGTTTTCAGTATCAAATGCTGCTTTGGAGATATTTCTGGAAGAGACTGCAGGGCTGGCCCGCTC

***********************************....((((.....(((((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).))))))))).))))........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
....................................................................................................ATCATAGAGGAAAATCCATGTT............................................................ 22 0 1 13.00 13 13
....................................................................................................ATCATAGAGGAAAATCCATGT............................................................. 21 0 1 9.00 9 9
....................................................................................................ATCATAGAGGAAAATCCATG.............................................................. 20 0 1 3.00 3 3
....................................................................................................ATCATAGAGAAAAATCCATGT............................................................. 21 1 1 1.00 1 1
....................................................................................................ATCATAGAGGAAAATCCATGTTT........................................................... 23 0 1 1.00 1 1
....................................................................................................CTCATAGAGGAAAATCCATGTT............................................................ 22 1 1 1.00 1 1
.......................................................................................................ATAGAGGAAAATCCATGT............................................................. 18 0 1 1.00 1 1
.....................................................................................................TCATAGAGGAAAATCCATGTT............................................................ 21 0 1 1.00 1 1
....................................................................................................ATCATGGAGGAAAATCCATG.............................................................. 20 1 3 0.33 1 1

Anti-sense strand reads

GAAACTACTTGGTGCGTGTCTAAACAGGAAAGGTCTTGAGTCAGGAAGAAACCATAAATTTTCCACCTATAAGGAAGATACAAATGCACTAAGTATCTATTAGTATCTCCTTTTAGGTACAAAAGTCATAGTTTACGACGAAACCTCTATAAAGACCTTCTCTGACGTCCCGACCGGGCGAG

***********************************....((((.....(((((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).))))))))).))))........*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:54 AM