ID:

eca-mir-30e

Coordinate:

chr2:17435650-17435741 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-51.5

Sense Strand Reads

TGTCGCCTCCGTAGTAGAGCAGGGTGCCTCACCGCGTCTCCGTTCTTTCTGGGCAGTCTTTGCTACTGTAAACATCCTTGACTGGAAGCTGTAAGGTGTTCAGAGGAGCTTTCAGTCGGATGTTTACAGCGGCAGGCTGCCACGGTCGTCCCCGGCTGTGCATCACCCTTGAGACATTGTAGGTTTGTGCCC

***************************************************((((((((..(((.((((((((((((..(((((((((((................))))))))))))))))))))))).)))))))))))....***********************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................TGTAAACATCCTTGACTGGAAGCT...................................................................................................... 24 0 1 18139.00 18139 18139
...................................................................GTAAACATCCTTGACTGGAAGCT...................................................................................................... 23 0 1 1518.00 1518 1518
............................................................................................................CTTTCAGTCGGATGTTTACAGC.............................................................. 22 0 1 1395.00 1395 1395
..................................................................TGTAAACATCCTTGACTGGAAGC....................................................................................................... 23 0 1 1096.00 1096 1096
..................................................................TGTAAACATCCTTGACTGGA.......................................................................................................... 20 0 1 872.00 872 872
..................................................................TGTAAACATCCTTGACTGGAAGCTT..................................................................................................... 25 1 1 856.00 856 856
............................................................................................................CTTTCAGTCGGATGTTTACAGT.............................................................. 22 1 1 348.00 348 348
..................................................................TGTAAACATCCTTGACTGGAA......................................................................................................... 21 0 1 213.00 213 213
..................................................................TGTAAACATCCTTGACTGGAAG........................................................................................................ 22 0 1 201.00 201 201
..................................................................TGTAAACATCCTTGACTGG........................................................................................................... 19 0 1 183.00 183 183
..................................................................TGTAAACATCCTTGACTGGT.......................................................................................................... 20 1 1 162.00 162 162
..................................................................TGTAAACATCCTTGACTGGAAGA....................................................................................................... 23 1 1 140.00 140 140
............................................................................................................CTTTCAGTCGGATGTTTACAG............................................................... 21 0 1 132.00 132 132
..................................................................TGTAAACATCCTTGACTGGAAGT....................................................................................................... 23 1 1 125.00 125 125
..................................................................TGTAAACATCCTTGACTGGAAGCG...................................................................................................... 24 1 1 114.00 114 114
............................................................................................................CTTTCAGTCGGATGTTTAC................................................................. 19 0 1 104.00 104 104
..................................................................TGTAAACATCCTTGACTGGGAGCT...................................................................................................... 24 1 1 98.00 98 98
............................................................................................................CTTTCAGTCGGATGTTTACA................................................................ 20 0 1 84.00 84 84
..................................................................TGTAAACATCCTGGACTGGAAGCT...................................................................................................... 24 1 1 81.00 81 81
..................................................................TGTAAACATCCTTGACTGGAATCT...................................................................................................... 24 1 1 77.00 77 77
...................................................................GTAAACATCCTTGACTGGAAGCTT..................................................................................................... 24 1 1 76.00 76 76
..................................................................TGTAAACATCCGTGACTGGAAGCT...................................................................................................... 24 1 1 75.00 75 75
..................................................................TGTAAACATCCTTGACGGGAAGCT...................................................................................................... 24 1 1 70.00 70 70
..................................................................TGTAAACATCCTTGACTGGAAGCTA..................................................................................................... 25 1 1 55.00 55 55
..................................................................TGTAAACATCCTTGACTGGAACCT...................................................................................................... 24 1 1 55.00 55 55
..................................................................TGTAAACATCCTTGACTGGAAGCTTA.................................................................................................... 26 2 1 53.00 53 53
..................................................................TGTAAACATCCTTGACTGGAAGCC...................................................................................................... 24 1 1 47.00 47 47
............................................................................................................CTTTCAGTCGGATGTTTACAGTT............................................................. 23 2 2 46.50 93 93
..................................................................TGTAAACATCCTTGACTGGAAA........................................................................................................ 22 1 1 46.00 46 46
..................................................................TGTAAACATCCTTGGCTGGAAGCT...................................................................................................... 24 1 1 46.00 46 46
............................................................................................................CTTTCAGTCGGATGTTTACAGCA............................................................. 23 1 1 43.00 43 43
..................................................................TGTAAACATCCTTGACTGGAAGCA...................................................................................................... 24 1 1 41.00 41 41
...................................................................GTAAACATCCTTGACTGGAAGC....................................................................................................... 22 0 1 40.00 40 40
..................................................................TGTAAAAATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 39.00 39 39
..................................................................TGTAAACATCCTTGACTGGAAACT...................................................................................................... 24 1 1 38.00 38 38
..................................................................TGTAAACATGCTTGACTGGAAGCT...................................................................................................... 24 1 1 34.00 34 34
............................................................................................................CTTTCAGTCGGATGTTTACAGA.............................................................. 22 1 1 33.00 33 33
..................................................................TGTAAACATACTTGACTGGAAGCT...................................................................................................... 24 1 1 33.00 33 33
............................................................................................................CTTTCAGTCGGATGTTTACAGTA............................................................. 23 2 1 32.00 32 32
............................................................................................................CTTTCAGTCGGATGTTTACAGCT............................................................. 23 1 1 31.00 31 31
..................................................................TGTAAACATCCTTGACTGA........................................................................................................... 19 1 3 29.33 88 88
....................................................................TAAACATCCTTGACTGGAAGCT...................................................................................................... 22 0 1 29.00 29 29
..................................................................TGTAAACATCCTTGACTGGAAGCCT..................................................................................................... 25 2 1 29.00 29 29
..................................................................TGTAAACATCCATGACTGGAAGCT...................................................................................................... 24 1 1 26.00 26 26
..................................................................TGTAAACATGCTTGACTGGGAGCT...................................................................................................... 24 2 1 25.00 25 25
..................................................................TGTAAACATCCTTGACTGGCAGCT...................................................................................................... 24 1 1 24.00 24 24
.............................................................................................................TTTCAGTCGGATGTTTACAGC.............................................................. 21 0 1 23.00 23 23
..................................................................TGTAAACATCCTTGACAGGAAGCT...................................................................................................... 24 1 1 23.00 23 23
..................................................................TGTAAACATCTTTGACTGGA.......................................................................................................... 20 1 1 22.00 22 22
..................................................................TGTAAACATTCTTGACTGGA.......................................................................................................... 20 1 1 22.00 22 22
...................................................................GTAAACATCCTTGACTGGAAGCTGT.................................................................................................... 25 0 1 21.00 21 21
..................................................................TGTAAACATCCTTGAC.............................................................................................................. 16 0 4 20.75 83 83
..................................................................TGTAAAGATGCTTGACTGGAAGCT...................................................................................................... 24 2 1 20.00 20 20
..................................................................TGTAAACATCCTTGACCGGAAGCT...................................................................................................... 24 1 1 19.00 19 19
..................................................................TGTAAACATCCTAGACTGGAAGCT...................................................................................................... 24 1 1 18.00 18 18
..................................................................TGTAAACATCTTTGACTGGAAGCT...................................................................................................... 24 1 1 17.00 17 17
..................................................................TGTAAACATCCTTGACTGGAT......................................................................................................... 21 1 1 17.00 17 17
..................................................................TGTAAACATCGTTGACTGGAAGCT...................................................................................................... 24 1 1 17.00 17 17
............................................................................................................CTTTCAGTCGGGTGTCTGCAGC.............................................................. 22 3 6 16.50 99 99
..................................................................TGTAAACATCCTTGACTGGAAGCTTT.................................................................................................... 26 1 1 16.00 16 16
...................................................................GTAAACATCCTTGACTGGAAGGT...................................................................................................... 23 1 1 16.00 16 16
..................................................................TGTAAACATTCTTGACTGGAAGCT...................................................................................................... 24 1 1 15.00 15 15
............................................................................................................CTTTCAGTCGGATGTTTACAC............................................................... 21 1 1 15.00 15 15
..................................................................TGTAAACATCCTTGGCGGGAAGCT...................................................................................................... 24 2 1 15.00 15 15
..................................................................TGTAAAGATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 14.00 14 14
..................................................................TGTAAAAATACTTGACTGGAAGCT...................................................................................................... 24 2 1 13.00 13 13
.................................................................CTGTAAACATCCTTGACTGGAAGCT...................................................................................................... 25 0 1 13.00 13 13
..................................................................TGTAAACATCCCTGACTGGA.......................................................................................................... 20 1 2 13.00 26 26
..................................................................TGTAAAGATACTTGACTGGAAGCT...................................................................................................... 24 2 1 12.00 12 12
..................................................................TGTAAACATCCTCGACTGGAAGCT...................................................................................................... 24 1 2 12.00 24 24
..................................................................AGTAAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 10.00 10 10
..................................................................TGTAAACATCCTTGACTGGAAGCCC..................................................................................................... 25 2 1 10.00 10 10
...................................................................GTAAACATCCTTGACTGGAAGA....................................................................................................... 22 1 1 10.00 10 10
..................................................................TGTAAATATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 9.00 9 9
..................................................................CGTAAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 9.00 9 9
..................................................................TGTAAACATCCTTGACTGGG.......................................................................................................... 20 1 1 9.00 9 9
..................................................................TGTAAACATCCTTGACTGGAAT........................................................................................................ 22 1 1 9.00 9 9
..................................................................TGTAAACATCCTTGACTGTAAGCT...................................................................................................... 24 1 1 8.00 8 8
..................................................................TGTAAACATCCTCGACTGGA.......................................................................................................... 20 1 3 8.00 24 24
...................................................................GTAAACATCCTTGACTGGAAGTT...................................................................................................... 23 1 1 8.00 8 8
..................................................................TGTAAACATCCTTGACTGGAACC....................................................................................................... 23 1 1 8.00 8 8
............................................................................................................CTTTCAGTCGGATGTTTACACC.............................................................. 22 1 1 8.00 8 8
..................................................................TGTAAACATCCTTGACTGGAAGCTTTATT................................................................................................. 29 3 1 7.00 7 7
..................................................................GGTAAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 7.00 7 7
..................................................................TGTAAACATACTTGACTGGGAGCT...................................................................................................... 24 2 1 7.00 7 7
..................................................................TATAAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 7.00 7 7
..................................................................TGTAAACATCCGTGACTGGAACCT...................................................................................................... 24 2 1 7.00 7 7
..................................................................TGTAAAGATGCTTGACTGGGAGCT...................................................................................................... 24 3 1 7.00 7 7
............................................................................................................CTTTCAGTCGGAGGTTTACAGC.............................................................. 22 1 1 7.00 7 7
.............................................................................................................TTTCAGTCGGATGTTTACAGCT............................................................. 22 1 1 7.00 7 7
...................................................................GTAAACATCCTTGACTGGAGGCT...................................................................................................... 23 1 1 7.00 7 7
............................................................................................................CTTTCAGTCGGGTGTTTACAGC.............................................................. 22 1 1 7.00 7 7
............................................................................................................CTTTCAGTCGGATGTTTACAGAT............................................................. 23 2 1 7.00 7 7
..................................................................TGTAAACATCTTTGACTGGAAGC....................................................................................................... 23 1 1 7.00 7 7
..................................................................TGTAAACATCCTTGACTGGAAGCTTTA................................................................................................... 27 1 1 6.00 6 6
...................................................................GTAAACATCGTTGACTGGAAGCT...................................................................................................... 23 1 1 6.00 6 6
...................................................................GTAAACATCCTTGACTGGAAG........................................................................................................ 21 0 1 6.00 6 6
..................................................................TGTAAACATCATTGACTGGAAGCT...................................................................................................... 24 1 1 6.00 6 6
............................................................................................................CTTTCAGTCGGATGTTTACAGG.............................................................. 22 1 1 6.00 6 6
...................................................................GTAAACATCCTTGACTGGAAGCC...................................................................................................... 23 1 1 6.00 6 6
..................................................................TGTAAACATCCCTGACTGGAAGCT...................................................................................................... 24 1 2 6.00 12 12
..................................................................TGTAAACATCCTTGACGGGAAGC....................................................................................................... 23 1 1 6.00 6 6
..................................................................TCTAAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 6.00 6 6
..................................................................TGTAGACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 6.00 6 6
............................................................................................................CTTTCAGTCGGATGTTTACAA............................................................... 21 1 1 6.00 6 6
..................................................................TGTAAACATCCTGGACTGGAAGCG...................................................................................................... 24 2 1 6.00 6 6
..................................................................TGTAAACATCCTTGACTGGAAGCTAAC................................................................................................... 27 3 1 5.00 5 5
...................................................................GTAAACATCCTGGACTGGAAGCT...................................................................................................... 23 1 1 5.00 5 5
..................................................................TGTGAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 5.00 5 5
..................................................................TGTAAACATCCGTGACTGGAATCT...................................................................................................... 24 2 1 5.00 5 5
............................................................................................................CTTTCAGTCGGATGTTGACAGC.............................................................. 22 1 1 5.00 5 5
..................................................................TGTAAACATCCTGGACTGGAAGCTT..................................................................................................... 25 2 1 5.00 5 5
..................................................................TGTAAACATTCTTGACTGGAAGC....................................................................................................... 23 1 1 5.00 5 5
..................................................................TGTAAACATCCTTGTCTGGAAGCT...................................................................................................... 24 1 1 5.00 5 5
..................................................................TGTAAACATCCGTGACTGGAAGC....................................................................................................... 23 1 1 5.00 5 5
..................................................................TGTAAACATCCTTGACTGGAAGCTGT.................................................................................................... 26 0 1 5.00 5 5
..................................................................TGTAAACATACTTGACTGGCAGCT...................................................................................................... 24 2 1 5.00 5 5
..................................................................TGTAAACATCCTTGACTGGAAGCCA..................................................................................................... 25 2 1 5.00 5 5
............................................................................................................CTTTCAGTCGGATGTTTACGGC.............................................................. 22 1 1 5.00 5 5
............................................................................................................CTTTCAGTCGGATGTTTACACT.............................................................. 22 2 2 5.00 10 10
..................................................................TGTAAACATCCTTGACTGGAACCG...................................................................................................... 24 2 1 5.00 5 5
..................................................................TGTAAACATCCTTGACTGGTAGCT...................................................................................................... 24 1 1 5.00 5 5
............................................................................................................CTTTCAGTCGGATGTTAACAGC.............................................................. 22 1 1 5.00 5 5
...................................................................GTAAACATCGTTGACTGGAGGCT...................................................................................................... 23 2 1 5.00 5 5
............................................................................................................CTTTCAGTCGGATGGTTACAGC.............................................................. 22 1 1 5.00 5 5
..................................................................TGTAAACATCCTGGACTGGAAGC....................................................................................................... 23 1 1 5.00 5 5
..................................................................TGTAAACATCCTTGACTGGAAGCTAAT................................................................................................... 27 3 1 4.00 4 4
..................................................................TGTAAACATGCTTGACTGGTAGCT...................................................................................................... 24 2 1 4.00 4 4
...................................................................GTAAACATCCTTGACTGGAAGCTA..................................................................................................... 24 1 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTGGTA......................................................................................................... 21 1 1 4.00 4 4
..................................................................TGTAAACATGCTTGACTGGCAGCT...................................................................................................... 24 2 1 4.00 4 4
...................................................................GTAAACATCCTTGACTGGAAGCA...................................................................................................... 23 1 1 4.00 4 4
............................................................................................................CTTTCAGTCGGATGTTTACCGC.............................................................. 22 1 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTGGAAGCTAAA................................................................................................... 27 2 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTGGAATC....................................................................................................... 23 1 1 4.00 4 4
..................................................................TGTAAACATCCTTGACT............................................................................................................. 17 0 1 4.00 4 4
....................................................................TAAACATCCTTGACTGGAAGCTGT.................................................................................................... 24 0 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTG............................................................................................................ 18 0 1 4.00 4 4
..................................................................TGTAAACATCCTTGCCTGGAAGCT...................................................................................................... 24 1 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTGGGAGA....................................................................................................... 23 2 1 4.00 4 4
...................................................................GTAAACATCCTTGACTGGAAGCTG..................................................................................................... 24 0 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTGGAATCG...................................................................................................... 24 2 1 4.00 4 4
.............................................................................................................TTTCAGTCGGATGTTTACAGT.............................................................. 21 1 1 4.00 4 4
..................................................................TGTAAACATCCTTGACGGGAAGCTT..................................................................................................... 25 2 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTGGAAGCTAT.................................................................................................... 26 1 1 4.00 4 4
..................................................................TGTAAACATCCGTGACTGGAAACT...................................................................................................... 24 2 1 4.00 4 4
..................................................................TGTAAACATCCTTGACTGT........................................................................................................... 19 1 5 3.40 17 17
..................................................................TGTAAACATTCTTGACTGGAA......................................................................................................... 21 1 1 3.00 3 3
..................................................................TGTAAACATCCTGGACTGGAACCT...................................................................................................... 24 2 1 3.00 3 3
...................................................................GTAAACATCTTTGACTGGAAGC....................................................................................................... 22 1 1 3.00 3 3
..................................................................TGTAAAAATCCTTGACTGGAAGC....................................................................................................... 23 1 1 3.00 3 3
..................................................................TGTAAATATGCTTGACTGGAAGCT...................................................................................................... 24 2 1 3.00 3 3
..................................................................TGTAAACATCCTTGACTGGC.......................................................................................................... 20 1 1 3.00 3 3
..................................................................TGTAAACATTCTTGACTGGGAGCT...................................................................................................... 24 2 1 3.00 3 3
..................................................................TGTAAACATCCTTGACGGGAA......................................................................................................... 21 1 1 3.00 3 3
..................................................................TGTAAACATCCTTGACTGGAAGCTAAGA.................................................................................................. 28 3 1 3.00 3 3
..................................................................TGTAAACATCCATGACTGGAATCT...................................................................................................... 24 2 1 3.00 3 3
..................................................................TGTAAACATTCTTGACTGGAAGT....................................................................................................... 23 2 1 3.00 3 3
............................................................................................................CTTTCAGTCGGGTGTTTACAGT.............................................................. 22 2 1 3.00 3 3
...................................................................GTAAACATCCTTGACTGGAAGT....................................................................................................... 22 1 1 3.00 3 3
..........................................................................................GTAAGGTGTTCAGAGGAG.................................................................................... 18 0 1 3.00 3 3
............................................................................................................CTTTCAGTCGGATGGTGACAGC.............................................................. 22 2 1 3.00 3 3
...................................................................GTAAACATCCGTGACTGGAAGCT...................................................................................................... 23 1 1 3.00 3 3
..................................................................TGTAAACATCCTTGACTGGAAGCTAAAA.................................................................................................. 28 2 1 3.00 3 3
..................................................................TGTAAACATGCTTGACTGGA.......................................................................................................... 20 1 1 3.00 3 3
..................................................................TGTAAACATCCGTGACTGGA.......................................................................................................... 20 1 1 3.00 3 3
..................................................................TGTAAAAATGCTTGACTGGAAGCT...................................................................................................... 24 2 1 3.00 3 3
...........................................................................................................GCTTTCAGTCGGATGTTTACAG............................................................... 22 0 1 3.00 3 3
..................................................................TGTAAACATCCCTGACTGGAA......................................................................................................... 21 1 2 3.00 6 6
..................................................................TGTAAACATCCTGGGCTGGAAGCT...................................................................................................... 24 2 1 3.00 3 3
..................................................................TGTAAACATCCTTGACTGAAAGCT...................................................................................................... 24 1 1 3.00 3 3
...................................................................GTAAACATCCTTGACTGGAAGCCC..................................................................................................... 24 2 1 3.00 3 3
..................................................................TGTAAACATGCTTGACTGGGAGCTT..................................................................................................... 25 3 1 3.00 3 3
..................................................................TGTAAACATCCTTGACTGGAGT........................................................................................................ 22 2 2 2.50 5 5
............................................................................................................CTTTCAGTCGGATGTTTAA................................................................. 19 1 2 2.50 5 5
.............................................................................................................TTTCAGTCGGATGTTTACAGTT............................................................. 22 2 2 2.50 5 5
..................................................................TGTAAACATCCTTGACTGGAACCTT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAACATCCATGACTGGAAGC....................................................................................................... 23 1 1 2.00 2 2
...........................................................................................................GCTTTCAGTCGGATGTTTACAGT.............................................................. 23 1 1 2.00 2 2
...................................................................GTAAACATCCTTGACTGGA.......................................................................................................... 19 0 1 2.00 2 2
..................................................................TGAAAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTAAAT.................................................................................................. 28 3 1 2.00 2 2
..................................................................TGTAAACATCCTTGACAGGAAGC....................................................................................................... 23 1 1 2.00 2 2
....................................................................TAAACATCCTTGACTGGAAGCTT..................................................................................................... 23 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGGCGGGAAGC....................................................................................................... 23 2 1 2.00 2 2
...................................................................GTAAACATCCTTGACTAGAAGCT...................................................................................................... 23 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGAT...................................................................................................... 24 1 1 2.00 2 2
..................................................................TGTAAACATCCGTGACTGGAAGCTT..................................................................................................... 25 2 1 2.00 2 2
............................................................................................................CTTTCAGTCGGATGTTTACAGAA............................................................. 23 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTATA................................................................................................... 27 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTGAT................................................................................................... 27 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGTT...................................................................................................... 24 1 1 2.00 2 2
...................................................................TTAAACATCCTTGACTGGAAGCT...................................................................................................... 23 1 1 2.00 2 2
..................................................................TGTAAACATCCGTGACTGGAATC....................................................................................................... 23 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGGAG........................................................................................................ 22 1 1 2.00 2 2
............................................................................................................CTTTCAGTCGGATGTTTACTGC.............................................................. 22 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTAGA................................................................................................... 27 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGGAGC....................................................................................................... 23 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTCGAAGCT...................................................................................................... 24 1 1 2.00 2 2
..................................................................TGTAAAGATCCTTGACTGGAAGCTT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAACATCCTGGACTGGAAACT...................................................................................................... 24 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGAA...................................................................................................... 24 2 1 2.00 2 2
...................................................................GTAAACATCCTTGACTGGT.......................................................................................................... 19 1 1 2.00 2 2
..................................................................TGTAAACATCCTGGACTGGAAGCC...................................................................................................... 24 2 1 2.00 2 2
..................................................................TGTACACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 2.00 2 2
...................................................................GTAAACATCTTTGACTGGAAGCT...................................................................................................... 23 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCGT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAAAATGCTTGACTGGGAGCT...................................................................................................... 24 3 2 2.00 4 4
..................................................................TGTAAACATCCTTGACTGGAAGCTTAAT.................................................................................................. 28 3 1 2.00 2 2
..................................................................TGTAAACATCCTTGGCTGGAAGCTT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAAGATCCTTGACTGGGAGCT...................................................................................................... 24 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAGGCT...................................................................................................... 24 1 1 2.00 2 2
............................................................................................................CTTTCAGTCGGATGTTGAC................................................................. 19 1 1 2.00 2 2
..................................................................TGTAAAGATCCTTGACTGGA.......................................................................................................... 20 1 1 2.00 2 2
............................................................................................................CTTTCAGTCGGAGGTTTACAGT.............................................................. 22 2 1 2.00 2 2
...................................................................GTAAACATCATTGACTGGAAGCT...................................................................................................... 23 1 1 2.00 2 2
...................................................................GTAAACATCCTTAACTGGAAGCT...................................................................................................... 23 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAACTT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACAGGAAGCTT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAACATCCTAGACTGGA.......................................................................................................... 20 1 1 2.00 2 2
............................................................................................................CTTTCACTCGGATGTTTACGGC.............................................................. 22 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGTAGCTT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTTTAGT................................................................................................. 29 3 1 2.00 2 2
..................................................................TGTAAACATCCTTGGCGGGAAGCTT..................................................................................................... 25 3 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGGA......................................................................................................... 21 1 1 2.00 2 2
..................................................................TGTAAACATCCTTTACTGGAAGCT...................................................................................................... 24 1 1 2.00 2 2
............................................................................................................CTTTCAGTCGGATGTTAACAGT.............................................................. 22 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTAAAAGT................................................................................................ 30 3 1 2.00 2 2
..................................................................TGTAAACATCCTGGACTGGA.......................................................................................................... 20 1 2 2.00 4 4
..................................................................TGTAAACATCCTTGATTGGAAGCT...................................................................................................... 24 1 1 2.00 2 2
..................................................................TGTAAACATTCTTGACTGGAAGA....................................................................................................... 23 2 1 2.00 2 2
..................................................................TGTAAACATACTTGACTGGA.......................................................................................................... 20 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGGCTGGAAGCG...................................................................................................... 24 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTATT................................................................................................... 27 2 1 2.00 2 2
............................................................................................................CTTTCAGTCGGATGTTTGCAGC.............................................................. 22 1 1 2.00 2 2
..................................................................TGTAAAGATACTTGACTGGAAGC....................................................................................................... 23 2 1 2.00 2 2
...................................................................GTAAACATCCTTGACTGGAAA........................................................................................................ 21 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGGCAGGAAGCT...................................................................................................... 24 2 1 2.00 2 2
...................................................................GTGAACATCCTTGACTGGAAGCT...................................................................................................... 23 1 1 2.00 2 2
..................................................................TTTAAACATCCTTGACTGGAAGCT...................................................................................................... 24 1 1 2.00 2 2
...................................................................GGAAACATCCTTGACTGGAAGCT...................................................................................................... 23 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCTGAG................................................................................................... 27 2 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAATCTT..................................................................................................... 25 2 1 2.00 2 2
..................................................................TGTAAACAACCTTGACTGGAAGCT...................................................................................................... 24 1 1 2.00 2 2
..................................................................TGTAAACATCCTTGACTGGAAGCAA..................................................................................................... 25 2 2 1.50 3 3
..................................................................TGTAAACATGCTTGACTGG........................................................................................................... 19 1 2 1.50 3 3
............................................................................................................CTTTCAGTCGGATGTTTACGGT.............................................................. 22 2 2 1.50 3 3
..................................................................TGTAAACATCCCTGACTGGAAGC....................................................................................................... 23 1 2 1.50 3 3
..................................................................TGTAAACATCCTTGACGGGA.......................................................................................................... 20 1 2 1.50 3 3
..................................................................TGTAAACATCCTTGACTGGAAAA....................................................................................................... 23 2 2 1.50 3 3
..................................................................TGTAAAAATACTTGACTGGGAGCT...................................................................................................... 24 3 3 1.33 4 4
..................................................................TGTAAACATCCTTGACAGGA.......................................................................................................... 20 1 3 1.33 4 4
............................................................................................................CTTTCAGTCGGGTGTCTGCAG............................................................... 21 3 20 1.20 24 24
............................................................................................................CTTTCAGTCGGATGTTTACAGCTGGA.......................................................... 26 2 1 1.00 1 1
............................................................................................................CTTTCAGTCGGGTGTCTGCAGCG............................................................. 23 3 1 1.00 1 1
............................................................................................................CTTTCAGTCGGATGGTTAC................................................................. 19 1 1 1.00 1 1
..................................................................TGTAAAGATACTTGACTGGAAGCTT..................................................................................................... 25 3 1 1.00 1 1
...................................................................GTAAACATCCTTGAGTGGAAGCT...................................................................................................... 23 1 1 1.00 1 1
...................................................................GTAAACATTCTTGACTGGAAGCT...................................................................................................... 23 1 1 1.00 1 1
..................................................................TGTAAACATCCTCGACTGGAACCT...................................................................................................... 24 2 2 1.00 2 2
..................................................................TATAAACATCCTTGACTGGAAGA....................................................................................................... 23 2 1 1.00 1 1
............................................................................................................CTTTCAGTTGGATGTTTACAGC.............................................................. 22 1 1 1.00 1 1
..................................................................TGTAAACATCCTTGGCTGGAAG........................................................................................................ 22 1 1 1.00 1 1
..................................................................TGTAAACATCCTTGACTGCAAGCT...................................................................................................... 24 1 1 1.00 1 1
..................................................................TGTAAACATCCTTGACCGGA.......................................................................................................... 20 1 1 1.00 1 1
...........................................................................................................GCTTTCAGTCGGATGTTTACAGC.............................................................. 23 0 1 1.00 1 1
..................................................................TGTAAAAATACTTGACTGGAAGC....................................................................................................... 23 2 1 1.00 1 1
............................................................................................................CTTTCAGTCGGAAGTTTACAGC.............................................................. 22 1 1 1.00 1 1
..................................................................TGTAAACATACTTGACTGGGAGC....................................................................................................... 23 2 1 1.00 1 1
..................................................................TGTAAACATCCTTGACAGGAA......................................................................................................... 21 1 1 1.00 1 1
..................................................................TGTAAACATCCTCGACTGGAAG........................................................................................................ 22 1 2 1.00 2 2
............................................................................................................CTTTCAGTCGGACGTTTACA................................................................ 20 1 1 1.00 1 1
..................................................................TGTAAACGTCCTTGACTGGAAGCT...................................................................................................... 24 1 1 1.00 1 1
..................................................................TGTAAACATCCTTGTCAGGAAGCT...................................................................................................... 24 2 1 1.00 1 1
..................................................................TGTAAACATCCTTGACTGGAAAT....................................................................................................... 23 2 1 1.00 1 1
............................................................................................................CTTTCAGTCGGATGGTTACAGTA............................................................. 23 3 1 1.00 1 1
..................................................................TGTAAACATTCTTGACTGG........................................................................................................... 19 1 1 1.00 1 1
..................................................................TGTAAACATGCTTGACTGGCAGC....................................................................................................... 23 2 1 1.00 1 1
..................................................................TGTAAACATCCTTGACTGAAA......................................................................................................... 21 1 1 1.00 1 1
.....................................................................AAACATCCTTGACTGGAAGCT...................................................................................................... 21 0 1 1.00 1 1
..................................................................TGTAAACATCCTTGACTGGAAGCTTAT................................................................................................... 27 3 1 1.00 1 1
..................................................................TGTAAACATCCTTGACCGGAAGCTT..................................................................................................... 25 2 1 1.00 1 1
..................................................................TGTAAACATCCTTGACTGGAAGCTAATA.................................................................................................. 28 3 1 1.00 1 1
............................................................................................................CTTTCAGTCGGATGTTTACAGCTA............................................................ 24 2 1 1.00 1 1
..................................................................TGTAAAGATACTTGACTGGCAGCT...................................................................................................... 24 3 2 1.00 2 2
...............................................................GTGTGTAAACATCCTTGACTGGAAGCT...................................................................................................... 27 3 1 1.00 1 1
..................................................................TGTAACCCTCCTTGACTGGAAGCT...................................................................................................... 24 2 1 1.00 1 1
.................................................................CTGTAAACATCCTTGACTGGA.......................................................................................................... 21 0 1 1.00 1 1
...................................................................GTAAACCTCGTTGACTGGAAGCT...................................................................................................... 23 2 1 1.00 1 1
...................................................................GTAAACATCCTTGACTGGAAGCTGG.................................................................................................... 25 1 1 1.00 1 1
............................................................................................................TTTTCAGTCGGATGTTTACAGC.............................................................. 22 1 1 1.00 1 1
............................................................................................................CTTTCAGTCGGATGTTTACAGAGA............................................................ 24 2 1 1.00 1 1
............................................................................................................CTTTCAGTCGGATGGTTACAGT.............................................................. 22 2 1 1.00 1 1
..................................................................TGTAAACATCCTTGAATGGAAGCT...................................................................................................... 24 1 1 1.00 1 1
..................................................................TGTAAACATCCTTGACTGGAAGCCAAAA.................................................................................................. 28 3 1 1.00 1 1
.............................................................................................................TTTCAGTCGGATGTTTACAA............................................................... 20 1 1 1.00 1 1
.................................................................CTGTAAACATCCTTGACTGGAAGAT...................................................................................................... 25 1 1 1.00 1 1
............................................................................................................CTTTCAGTCGGATGTTTACAGCGT............................................................ 24 1 1 1.00 1 1
..................................................................TGTAAACATCCTTGACTGGAAAC....................................................................................................... 23 1 1 1.00 1 1
.............................................................................................................TTTCAGTCGGATGTTTACACT.............................................................. 21 2 2 1.00 2 2
..................................................................TGAAAACATCCTTGACTGGAAGCC...................................................................................................... 24 2 1 1.00 1 1

Anti-sense strand reads

ACAGCGGAGGCATCATCTCGTCCCACGGAGTGGCGCAGAGGCAAGAAAGACCCGTCAGAAACGATGACATTTGTAGGAACTGACCTTCGACATTCCACAAGTCTCCTCGAAAGTCAGCCTACAAATGTCGCCGTCCGACGGTGCCAGCAGGGGCCGACACGTAGTGGGAACTCTGTAACATCCAAACACGGG

***********************************************((((((((..(((.((((((((((((..(((((((((((................))))))))))))))))))))))).)))))))))))....***************************************************
Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................................CCGAAGGTCAGCCCACAAATGT................................................................ 22 3 10 238.40 2384 2384
...........................................................................................................CGAAGGTCAGCCCACAAATGT................................................................ 21 2 3 171.67 515 515
.........................................................................................................CCCGAAGGTCAGCCCACAAATGT................................................................ 23 3 5 48.00 240 240
............................................................................................................GAAGGTCAGCCCACAAATGT................................................................ 20 2 6 30.50 183 183
..........................................................................................................TCGAAGGTCAGCCCACAAATGT................................................................ 22 2 3 8.33 25 25
..........................................................................................................ACGAAGGTCAGCCCACAAATGT................................................................ 22 3 9 6.78 61 61
..........................................................................................................GCGAAGGTCAGCCCACAAATGT................................................................ 22 3 4 3.50 14 14
..........................................................................................................CCGAAAGTCAGCCCACAAATGT................................................................ 22 2 1 3.00 3 3
.........................................................................................................TTCGAAGGTCAGCCCACAAATGT................................................................ 23 3 4 2.00 8 8
.........................................................................................................TCCGAAAGTCAGCCCACAAATGT................................................................ 23 3 4 1.50 6 6
...........................................................................................................CGAAAGTCAGCCCACAAATGT................................................................ 21 1 1 1.00 1 1
..........................................................................................................ACGAAGGTCAGCCTACAAATGT................................................................ 22 2 1 1.00 1 1
.........................................................................................................CGCGAAGGTCAGCCCACAAATGT................................................................ 23 3 3 1.00 3 3
..............................................................................................................AGGTCAGCCTACAAATGT................................................................ 18 1 1 1.00 1 1
..........................................................................................................CCGAAGGTCAGCCCACAAATGTC............................................................... 23 3 5 0.60 3 3
.........................................................................................................CACGAAGGTCAGCCCACAAATGT................................................................ 23 3 3 0.33 1 1
...........................................................................................................CGAAGGTCAGCCCACAAATG................................................................. 20 2 7 0.29 2 2
............................................................................................................GAACGTCAGCCCACAAATGT................................................................ 20 2 4 0.25 1 1
.........................................................................................................ATCGAAGGTCAGCCCACAAATGT................................................................ 23 3 6 0.17 1 1
................................................................................................................GTCAGCCCACAAATGT................................................................ 16 1 17 0.06 1 1
...........................................................................................................CGAAGGTCAGCCCAGAAATGT................................................................ 21 3 17 0.06 1 1

Generated: 09/01/2015 at 11:47 AM