ID:

eca-mir-30c

 Coordinate:

chr2:17432728-17432816 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.3 -34.3 -34.1
mature

  1. eca-mir-30c  chr2:17432777-17432800 -
  2. eca-mir-30c-2  chr20:62697785-62697808 -
star

Sense Strand Reads

TCTCTGTGTCGGTGGTCAGGGGCTGACCAACCCCGGACCCTGAGGCTGTAACCATGCTGTAGTGTGTGTAAACATCCTACACTCTCAGCTGTGAGCTCAAGGTGGCTGGGAGAGGGTTGTTTACTCCTTCTGCCATGGAAAGCGTCCACTGAAGAAGGAACAGTCTCTTCACTCAGCAGACTGGACAGA

***************************************************(((((..((((.....(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).....)))))))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................TGTAAACATCCTACACTCTCAGCT................................................................................................... 24 0 2 2602.00 5204 5204
..................................................................TGTAAACATCCTACACTCTCAGC.................................................................................................... 23 0 2 457.00 914 914
..................................................................TGTAAACATCCTACACTCTCAGCTGTGAGCT............................................................................................ 31 0 1 192.00 192 192
..................................................................TGTAAACATCCTACACTCTCA...................................................................................................... 21 0 2 118.50 237 237
.........................................................................................................CTGGGAGAGGGTTGTTTACTCC.............................................................. 22 0 1 85.00 85 85
..................................................................TGTAAACATCCTACACTCTCAG..................................................................................................... 22 0 2 56.50 113 113
..................................................................TGTAAACATCCTACACTCTCAGT.................................................................................................... 23 1 2 51.50 103 103
..................................................................TGTAAACATCCTACACTCTCAGA.................................................................................................... 23 1 2 40.00 80 80
..................................................................TGTAAACATCCTACACTCTCAGCTT.................................................................................................. 25 1 2 37.00 74 74
..................................................................TGTAAACATCCTACACTCTCAGCA................................................................................................... 24 1 2 27.00 54 54
..................................................................TGTAAACATCCTACACTCTCAGCTGT................................................................................................. 26 0 2 23.50 47 47
..................................................................TGTAAACATCCTACACTCTCAGCTA.................................................................................................. 25 1 2 21.50 43 43
..................................................................TGTAAACATCCTACACTCTCAGCG................................................................................................... 24 1 2 17.50 35 35
..................................................................TGTAAACATCCTACACTCTGAGCT................................................................................................... 24 1 2 16.00 32 32
..................................................................TGTAAACATCCGACACTCTCAGCT................................................................................................... 24 1 2 14.00 28 28
..................................................................TGTAAACATCCTACACTCTAAGCT................................................................................................... 24 1 2 13.50 27 27
..................................................................TGTAAACATCCTACACTCTCAGCTG.................................................................................................. 25 0 2 11.50 23 23
..................................................................TGTAAACATCCTACACTCTCAGCTGTGAGC............................................................................................. 30 0 1 11.00 11 11
..................................................................TGTAAACATCCTGCACTCTCAGCT................................................................................................... 24 1 2 10.00 20 20
..................................................................TGTAAACATCCTACACGCTCAGCT................................................................................................... 24 1 2 10.00 20 20
.........................................................................................................CTGGGAGAGGGTTGTTTACTCT.............................................................. 22 1 1 9.00 9 9
..................................................................TGTAAACATCCTACACTCTCAGCTAT................................................................................................. 26 1 2 8.00 16 16
..................................................................TGTAAACATCCTACACTCTCACCT................................................................................................... 24 1 2 7.00 14 14
.........................................................................................................CTGGGAGAGGGTTGTTTACTC............................................................... 21 0 1 7.00 7 7
..................................................................TGTAAACATCCTACACTCTCAGCTTT................................................................................................. 26 1 2 6.50 13 13
..................................................................TGTAAACATCCTACACTCTC....................................................................................................... 20 0 2 6.50 13 13
..................................................................TGTAAACATCCTACACTCTCATCT................................................................................................... 24 1 2 6.50 13 13
..................................................................TGTAAACATCCTACGCTCTCAGCT................................................................................................... 24 1 2 6.50 13 13
..................................................................TGTAAACATCCTACACTCTCAT..................................................................................................... 22 1 2 6.50 13 13
..................................................................TGTAAAAATCCTACACTCTCAGCT................................................................................................... 24 1 2 5.00 10 10
..................................................................TGTAAACATCCTACACTCTCAGCTGTGAGCTT........................................................................................... 32 1 1 5.00 5 5
..................................................................TGTAAACATCCTACACTCTTAGCT................................................................................................... 24 1 2 4.50 9 9
..................................................................TGTAAACATCCTACACTCTCAGCTAA................................................................................................. 26 2 2 4.50 9 9
..................................................................TGTAAACATGCTACACTCTAAGCT................................................................................................... 24 2 2 4.00 8 8
..................................................................TGTAAACATCCTACACTCTCACC.................................................................................................... 23 1 2 4.00 8 8
..................................................................TGTAAACATCCTACACTCTCAGCTGTGAGCTC........................................................................................... 32 0 1 4.00 4 4
..................................................................TGTAAACATCCTACACACTCAGCT................................................................................................... 24 1 2 3.50 7 7
..................................................................TGTAAACATCCGACACTCTCAGC.................................................................................................... 23 1 2 3.50 7 7
..................................................................TGTAAACATCCTACACTCTCAACT................................................................................................... 24 1 2 3.50 7 7
..........................................................................................................TGGGAGAGGGTTGTTTACTCC.............................................................. 21 0 1 3.00 3 3
..................................................................TGTAAACATCCTACACTCTCAGCAA.................................................................................................. 25 2 2 3.00 6 6
..................................................................TGTAAACATCCTACACTCTCAGCTAAA................................................................................................ 27 3 2 3.00 6 6
..................................................................TGTAAACATCCTACACTCTCAGCTGA................................................................................................. 26 1 2 3.00 6 6
..................................................................TGTAAACATCCTACGCGCTCAGCT................................................................................................... 24 2 2 3.00 6 6
..................................................................TGTAAACATCCTACACTCTCAA..................................................................................................... 22 1 2 3.00 6 6
..................................................................TGTAAACATGCTACACTCTGAGCT................................................................................................... 24 2 2 3.00 6 6
..................................................................TGTAAAGATGCTACACTCTCAGCT................................................................................................... 24 2 2 2.50 5 5
..................................................................TGTAAACATCCGACACTCTCA...................................................................................................... 21 1 2 2.50 5 5
..................................................................TGTAAACATCCTACACTCTCAGCC................................................................................................... 24 1 2 2.50 5 5
..................................................................TGTAAACATCCTACACTCTCAGCTGTA................................................................................................ 27 1 2 2.50 5 5
..................................................................TGTAAACATCCTACACTCTCAGCCT.................................................................................................. 25 2 2 2.50 5 5
..................................................................TGTAAACATCCTACACTCTCATC.................................................................................................... 23 1 2 2.50 5 5
..................................................................TGTAAACATCCTACACTCTGAGC.................................................................................................... 23 1 2 2.50 5 5
..................................................................TGTAAACATCCTAAACTCTCAGCT................................................................................................... 24 1 2 2.50 5 5
..................................................................TGTAAACATCCTACACTCTCAGCTAGA................................................................................................ 27 3 3 2.33 7 7
..................................................................TGTAAACATACTACACTCTCAGCT................................................................................................... 24 1 2 2.00 4 4
................................CCGGACCCTGAGGCTGTAACCATGCTGTAGTGTG........................................................................................................................... 34 0 1 2.00 2 2
..................................................................TGTAAACATCCTCCACTCTCAGC.................................................................................................... 23 1 2 2.00 4 4
..................................................................TGTAAACATCCTACACTCTCAGCTAAAA............................................................................................... 28 3 1 2.00 2 2
..................................................................TGTAAACATCGTACACTCTCAGCT................................................................................................... 24 1 2 2.00 4 4
..................................................................TGTAAACATCCTACACGCTCAGC.................................................................................................... 23 1 2 2.00 4 4
..................................................................TGTAAACATCCTACACTCTCAGCAT.................................................................................................. 25 2 2 2.00 4 4
..................................................................TGTAAACATACTACACTCTAAGCT................................................................................................... 24 2 2 2.00 4 4
..................................................................TGTAAACATCCTACACCCTCAGCT................................................................................................... 24 1 2 2.00 4 4
..................................................................TGTAAACATCCTCCACTCTCAGCT................................................................................................... 24 1 2 2.00 4 4
..................................................................TGTAAACATCCTACACTCTCAGCTGTGAGCTTT.......................................................................................... 33 2 1 2.00 2 2
..........................................................................................................TGGGAGAGGGTTGTTTACT................................................................ 19 0 1 2.00 2 2
..................................................................TGTAAACATCCTACACTCTCAGCTTTT................................................................................................ 27 2 2 2.00 4 4
..................................................................TGTAAACATCCTACACTCT........................................................................................................ 19 0 2 2.00 4 4
..................................................................TGTAAACATCCTACACTCTCAGCGGTGAGCT............................................................................................ 31 1 1 2.00 2 2
..................................................................TGTAAAGATACTACACTCTAAGCT................................................................................................... 24 3 2 1.50 3 3
..................................................................TGTAAACATCCTACGCTCTCAGC.................................................................................................... 23 1 2 1.50 3 3
..................................................................TGTAAACATCTTACACTCTCAGCT................................................................................................... 24 1 2 1.50 3 3
..................................................................TGTAAACATCCTACACTCTCAAA.................................................................................................... 23 2 2 1.50 3 3
..................................................................TGTAAACATCCTACACTCTCAGG.................................................................................................... 23 1 2 1.50 3 3
..................................................................TGTAAACATCCTACACTCTCAGCTATT................................................................................................ 27 2 2 1.50 3 3
..................................................................TGTAAAGATCCTACACTCTCAGCT................................................................................................... 24 1 2 1.50 3 3
..................................................................TGTAAACATCCAACACTCTCAGC.................................................................................................... 23 1 2 1.50 3 3
..................................................................GGTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 1.50 3 3
..................................................................TGTAAACATGCTACACTCTCAGCT................................................................................................... 24 1 2 1.50 3 3
..................................................................TGTAAACATTCTACACTCTCAGCT................................................................................................... 24 1 2 1.50 3 3
..................................................................TGTAAACATCCTACACACTCAGC.................................................................................................... 23 1 2 1.50 3 3
..................................................................TGTAAAGATACTACACTCTCAGCT................................................................................................... 24 2 2 1.50 3 3
..................................................................TGTAAACATCCTACACTCTAAGC.................................................................................................... 23 1 2 1.50 3 3
..................................................................TGTAAAAATCCTACACTCTCAGC.................................................................................................... 23 1 2 1.50 3 3
..................................................................TGTAAACATCCTACACTCTCAGTT................................................................................................... 24 1 2 1.50 3 3
..................................................................TGTAAACATCCTACACTCTCAGCTATA................................................................................................ 27 2 2 1.50 3 3
..................................................................TGTAAACATCCTACACACTCAGCTGTGAGCT............................................................................................ 31 1 1 1.00 1 1
..................................................................TGTAAACATGCTACACTCTCA...................................................................................................... 21 1 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTCAGCTGTGAGCTCT.......................................................................................... 33 1 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTGTTAT.............................................................................................. 29 2 1 1.00 1 1
................................................................GGTGTAAACATCCTACACTCTCAGCT................................................................................................... 26 1 1 1.00 1 1
..................................................................TGTAAACATACTACACTCTAAGCTGTGAGCT............................................................................................ 31 2 1 1.00 1 1
..................................................................TGTAAAGATCCTACACTCTGAGCT................................................................................................... 24 2 2 1.00 2 2
..................................................................TATAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTAA...................................................................................................... 21 1 2 1.00 2 2
.........................................................................................................CTGGGAGAGGGTTGTTTACTCCT............................................................. 23 0 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCAGCAAA................................................................................................. 26 3 2 1.00 2 2
.........................................................................................................CTGGGAGAGGGTTGGTTACTCC.............................................................. 22 1 1 1.00 1 1
..................................................................TGTAAACATCCGACACTCTCATCT................................................................................................... 24 2 2 1.00 2 2
.....................................CCCTGAGGCTGTAACCATGCTGTAGTGTG........................................................................................................................... 29 0 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCATCGGTGAGCT............................................................................................ 31 2 1 1.00 1 1
..................................................................TGTAAACATACTACACTCTGAGCT................................................................................................... 24 2 2 1.00 2 2
.........................................................................................................CTGGGAGAGGGTTGTTTACT................................................................ 20 0 1 1.00 1 1
..................................................................TGTGAACATCCTACACTCTCAGCT................................................................................................... 24 1 3 1.00 3 3
..................................................................TGTAAACATGCTACACTCTGAGC.................................................................................................... 23 2 2 1.00 2 2
..................................................................TGTAAACATGCTACACTCTCAGCTGTGAGC............................................................................................. 30 1 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTAAT................................................................................................ 27 3 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTTAGC.................................................................................................... 23 1 2 1.00 2 2
..................................................................TGTAAACATCCGACACTCTCAGCTGTGAGCT............................................................................................ 31 1 1 1.00 1 1
..................................................................TGTAAACATCCTACACGCTCAGCTGTGAGC............................................................................................. 30 1 1 1.00 1 1
....................................ACCCTGAGGCTGTAACCATGCTGTAGTGTG........................................................................................................................... 30 0 1 1.00 1 1
..................................................................TGTAAACATCCTACACGCTCAGCTGTGAGAT............................................................................................ 31 2 1 1.00 1 1
.......................................................................ACATCCTACACTCTCAGCTGTGAGCT............................................................................................ 26 0 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCAGCGT.................................................................................................. 25 2 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTGAGCTGTGAGCT............................................................................................ 31 1 1 1.00 1 1
.........................................................................................................CTGGGAGAGGGTGGTTTACTCC.............................................................. 22 1 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTGAGCTGTAAT.............................................................................................. 29 3 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCATCTT.................................................................................................. 25 2 2 1.00 2 2
..................................................................TGTAAACATCCTGCACTCTCACC.................................................................................................... 23 2 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTAAGCTT.................................................................................................. 25 2 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTGAGCTGTGAGCTTA.......................................................................................... 33 2 1 1.00 1 1
..................................................................TGTAAACATCCTGCACTCTCAGCTGTGAGCT............................................................................................ 31 1 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTTTAAT.............................................................................................. 29 3 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTGAGCTT.................................................................................................. 25 2 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTCAGCTTAGA............................................................................................... 28 2 1 1.00 1 1
..................................................................TGTAAAAATCCTACACTCTCAGCTGTGAGCT............................................................................................ 31 1 1 1.00 1 1
..................................................................TGTAAACATTCTACACTCTTAGCT................................................................................................... 24 2 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTCAGCTGTAAT.............................................................................................. 29 2 1 1.00 1 1
..........................................................................................................TGGGAGAGGGTTGTTTACTCCA............................................................. 22 1 1 1.00 1 1
..................................................................TGTAAAGATCCTACACTCTCAGC.................................................................................................... 23 1 2 1.00 2 2
.........................................................................................................CTGGGAGAGGGTTGTTTACACC.............................................................. 22 1 1 1.00 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTGTAAA.............................................................................................. 29 2 2 1.00 2 2
..................................................................TGTAAACATCCTACACTCTCAGCTGTGAGCTCA.......................................................................................... 33 0 1 1.00 1 1
..................................................................TGTAAACATCCTACACCCTCAGCTGTGAGCT............................................................................................ 31 1 1 1.00 1 1
.........................................................................................................CTGGGAGAGGGTTGCTTACTCC.............................................................. 22 1 1 1.00 1 1
..................................................................TGTAAACATCATACACTCTCAGCT................................................................................................... 24 1 2 1.00 2 2
..................................................................GGTAAACATCCTACACTCTCAGC.................................................................................................... 23 1 2 1.00 2 2
.........................................................................................................CTGGGAGAGGGTTGTTTACTCA.............................................................. 22 1 1 1.00 1 1
.........................................................................................................CTGGGAGAGGGTTGTTTACTCCA............................................................. 23 1 1 1.00 1 1
..................................................................TGTAAAAATGCTACACTCTAAGCT................................................................................................... 24 3 3 0.67 2 2
..................................................................TGTAAAGATGCTACACTCTGAGCT................................................................................................... 24 3 5 0.60 3 3
..................................................................TTTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAGACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
.........................................................................................................CTGGGAGAGGGATGTTTACTCG.............................................................. 22 2 2 0.50 1 1
..................................................................TGTAAATATCCTACACTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACGCTCAGA.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGACT.................................................................................................. 25 3 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCACT................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGAAT.................................................................................................. 25 3 2 0.50 1 1
..................................................................TGTAAACATCCTATACTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCT...................................................................................................... 21 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACGCTCAGT.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGTA................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTTTTT............................................................................................... 28 3 2 0.50 1 1
..................................................................TGTAAACATCATACACTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAACATCCTATACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTGAA................................................................................................ 27 2 2 0.50 1 1
..................................................................TGTAAAAATCCTACACTCTGAGCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACGCCCTCAGC.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAAC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTGA...................................................................................................... 21 1 2 0.50 1 1
..................................................................TGTAAACATACTACACTCTCAGCTTT................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCATT................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAATATCCTACACTCTAAGCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCGACACTCTCACCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAAGATCCTACACTCTGAGCG................................................................................................... 24 3 2 0.50 1 1
..................................................................TGTAAACATCCTTCACTCTCA...................................................................................................... 21 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTGAGCTA.................................................................................................. 25 2 2 0.50 1 1
..................................................................TGTAAACATGCTACACTCTAAGC.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCATA................................................................................................. 26 3 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCGGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAAAATCCTACACTCTAAGCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACTCTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAACATTCTACACTCTGAGCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATTCTACACTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAACATCGTACACTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
...................................................................GTAAACATCCTACACTCTCAGCT................................................................................................... 23 0 2 0.50 1 1
..................................................................TGTAAACATCCTTCACTCTCAGCTTT................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAAGATTCTACACTCTGAGCT................................................................................................... 24 3 2 0.50 1 1
..................................................................TGTAAACATCCTACCCTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAGCATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAAAATACTACACTCTCAGCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAATATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACATCCTGCGCTCTCAGCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTAAGT............................................................................................... 28 3 2 0.50 1 1
..................................................................CGTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACATCCTACAGTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACATCCTACCCTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCATT.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTTAGCTGT................................................................................................. 26 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTAAGAT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATGCTACACTCTCAGCA................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCGA.................................................................................................. 25 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCATA.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAACG................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATACTACACTCTCAG..................................................................................................... 22 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGGT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACGTCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAGAGATCCTCCACTCTCAGCT................................................................................................... 24 3 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCAGT................................................................................................. 26 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCGAA................................................................................................. 26 3 2 0.50 1 1
...................................................................GTAAACATCCTACACTCTCAGCTGT................................................................................................. 25 0 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTAAGT.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTCCACTCTCACCGGT................................................................................................. 26 3 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCCCAGA.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAAAATCCTACACTCTCAGCTGA................................................................................................. 26 2 2 0.50 1 1
......................................................................AACATCCTACACTCTCAGCT................................................................................................... 20 0 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTAAGCTTTT................................................................................................ 27 3 2 0.50 1 1
..................................................................AGTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGAAAACATCCTACACTCTCAGC.................................................................................................... 23 1 2 0.50 1 1
..................................................................TGTAAACATACTACACTCTAAGC.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAAAATGCTACACTCTCAGCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCGACACTCTCAGCTAT................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAAT.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAAGATCCTACACTCTCA...................................................................................................... 21 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCATCG................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACTCTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCACCG................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCAACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCACCGGT................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTGAGA.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTAAGCTGT................................................................................................. 26 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGTAA.................................................................................................. 25 3 2 0.50 1 1
..................................................................TGTAAACATCCTACGCTCTCAG..................................................................................................... 22 1 2 0.50 1 1
..................................................................TGTAAACATCCTACACGCTCA...................................................................................................... 21 1 2 0.50 1 1
..................................................................TGTAAACATCCTACCCTCTCAGA.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGAA................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAAAATCCTACACTCTGAGC.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTGCACTCTCATCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACGCGCTCAGC.................................................................................................... 23 2 2 0.50 1 1
..................................................................TGTAAACATCCTGCACTCTCACCT................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTTA................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACGCTCAGCTAT................................................................................................. 26 2 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTCAGCTTAA................................................................................................ 27 3 2 0.50 1 1
..................................................................TGTAAACATCCTACACCCTCA...................................................................................................... 21 1 2 0.50 1 1
..................................................................TGTAAACATGCTACACTCTAAGCTAT................................................................................................. 26 3 2 0.50 1 1
..................................................................TGTAAACATCCTACACTCTGAGCA................................................................................................... 24 2 2 0.50 1 1
..................................................................TGTAAACATGCTACACTCTGAG..................................................................................................... 22 2 3 0.33 1 1
..................................................................TGTAAACATTCTACACTCTAAGCT................................................................................................... 24 2 3 0.33 1 1
..................................................................TGTAAACATCCTGCACTCTCAGA.................................................................................................... 23 2 3 0.33 1 1
..................................................................TTTAAACATCCTACACTCTCAGT.................................................................................................... 23 2 3 0.33 1 1
..................................................................TGTAAACATCCTACACT.......................................................................................................... 17 0 3 0.33 1 1
..................................................................TGTAAACATCCCACACTCTCAGCT................................................................................................... 24 1 3 0.33 1 1
..................................................................TGTAAACATCCTACACTCTCAAAA................................................................................................... 24 3 3 0.33 1 1
..................................................................TGTAAAGATGCTACACTCTCAGCTA.................................................................................................. 25 3 3 0.33 1 1
..................................................................TGTAAACATCCTACACACTCAGCA................................................................................................... 24 2 3 0.33 1 1
..................................................................TGTAAAAATCCTACACTCTCAGCTT.................................................................................................. 25 2 3 0.33 1 1
..................................................................TGTAAACATACTACACTCTCAGT.................................................................................................... 23 2 3 0.33 1 1
..................................................................TGTAAACATTCTACACTCTAAGCC................................................................................................... 24 3 4 0.25 1 1
..................................................................TGTAAACATCCTGCGCTCTCATCT................................................................................................... 24 3 4 0.25 1 1
..................................................................TGTAAAGATGCTACACTCTCAGC.................................................................................................... 23 2 4 0.25 1 1
..................................................................TGTAAAGATGCTACACTCTGAGC.................................................................................................... 23 3 9 0.22 2 2
..................................................................TGTAAACATGCTACAATCTGAGCT................................................................................................... 24 3 5 0.20 1 1
..................................................................TGTAAACATCCTACAC........................................................................................................... 16 0 5 0.20 1 1
.........................................................................................................CTGGGAGAGGGTTGTTTAA................................................................. 19 1 6 0.17 1 1
..................................................................TGTAAACATGCTACACTCTAA...................................................................................................... 21 2 8 0.13 1 1
..................................................................TGTAAACATCCTACGCGCTCATC.................................................................................................... 23 3 8 0.13 1 1
..................................................................TGTAAAGATGCTACACTCTAAGC.................................................................................................... 23 3 8 0.13 1 1
..................................................................TGTAAACATTCTACACTCTCT...................................................................................................... 21 2 9 0.11 1 1

Anti-sense strand reads

AGAGACACAGCCACCAGTCCCCGACTGGTTGGGGCCTGGGACTCCGACATTGGTACGACATCACACACATTTGTAGGATGTGAGAGTCGACACTCGAGTTCCACCGACCCTCTCCCAACAAATGAGGAAGACGGTACCTTTCGCAGGTGACTTCTTCCTTGTCAGAGAAGTGAGTCGTCTGACCTGTCT

***********************************************(((((..((((.....(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).....)))))))))....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:48 AM