ID:

eca-mir-30c-2

 Coordinate:

chr20:62697749-62697808 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature

  1. eca-mir-30c  chr2:17432777-17432800 -
  2. eca-mir-30c-2  chr20:62697785-62697808 -
star

Sense Strand Reads

TGTGCTGCTGACCACCAACCCCACCCTAGAGAGCACTGAGTGACAGATACTGTAAACATCCTACACTCTCAGCTGTGGAAAGTGAGAAAGCTGGGAGAAGGCTGTTTACTCTCTCTGCCTTGGAAATCAACTAAAGAGAAATGGATCCGGAGTATTTTTC

***********************************(((((...((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....)))).)))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................TGTAAACATCCTACACTCTCAGCT...................................................................................... 24 0 2 2602.00 5204 5204
..................................................TGTAAACATCCTACACTCTCAGC....................................................................................... 23 0 2 457.00 914 914
..................................................TGTAAACATCCTACACTCTCA......................................................................................... 21 0 2 118.50 237 237
..................................................TGTAAACATCCTACACTCTCAG........................................................................................ 22 0 2 56.50 113 113
..................................................TGTAAACATCCTACACTCTCAGT....................................................................................... 23 1 2 51.50 103 103
..................................................TGTAAACATCCTACACTCTCAGA....................................................................................... 23 1 2 40.00 80 80
..................................................TGTAAACATCCTACACTCTCAGCTT..................................................................................... 25 1 2 37.00 74 74
..................................................TGTAAACATCCTACACTCTCAGCA...................................................................................... 24 1 2 27.00 54 54
..................................................TGTAAACATCCTACACTCTCAGCTGT.................................................................................... 26 0 2 23.50 47 47
..................................................TGTAAACATCCTACACTCTCAGCTA..................................................................................... 25 1 2 21.50 43 43
..................................................TGTAAACATCCTACACTCTCAGCTGTGGAA................................................................................ 30 0 1 18.00 18 18
..................................................TGTAAACATCCTACACTCTCAGCG...................................................................................... 24 1 2 17.50 35 35
..................................................TGTAAACATCCTACACTCTGAGCT...................................................................................... 24 1 2 16.00 32 32
..................................................TGTAAACATCCGACACTCTCAGCT...................................................................................... 24 1 2 14.00 28 28
..................................................TGTAAACATCCTACACTCTAAGCT...................................................................................... 24 1 2 13.50 27 27
..................................................TGTAAACATCCTACACTCTCAGCTG..................................................................................... 25 0 2 11.50 23 23
..................................................TGTAAACATCCTGCACTCTCAGCT...................................................................................... 24 1 2 10.00 20 20
..................................................TGTAAACATCCTACACGCTCAGCT...................................................................................... 24 1 2 10.00 20 20
..........................................................................................CTGGGAGAAGGCTGTTTACTCT................................................ 22 0 1 10.00 10 10
..................................................TGTAAACATCCTACACTCTCAGCTAT.................................................................................... 26 1 2 8.00 16 16
..................................................TGTAAACATCCTACACTCTCACCT...................................................................................... 24 1 2 7.00 14 14
..................................................TGTAAACATCCTACGCTCTCAGCT...................................................................................... 24 1 2 6.50 13 13
..................................................TGTAAACATCCTACACTCTCAGCTTT.................................................................................... 26 1 2 6.50 13 13
..................................................TGTAAACATCCTACACTCTCATCT...................................................................................... 24 1 2 6.50 13 13
..................................................TGTAAACATCCTACACTCTC.......................................................................................... 20 0 2 6.50 13 13
..................................................TGTAAACATCCTACACTCTCAT........................................................................................ 22 1 2 6.50 13 13
..........................................................................................CTGGGAGAAGGCTGTTTACT.................................................. 20 0 1 6.00 6 6
..................................................TGTAAAAATCCTACACTCTCAGCT...................................................................................... 24 1 2 5.00 10 10
..................................................TGTAAACATCCTACACTCTTAGCT...................................................................................... 24 1 2 4.50 9 9
..................................................TGTAAACATCCTACACTCTCAGCTAA.................................................................................... 26 2 2 4.50 9 9
..................................................TGTAAACATCCTACACTCTCACC....................................................................................... 23 1 2 4.00 8 8
..................................................TGTAAACATGCTACACTCTAAGCT...................................................................................... 24 2 2 4.00 8 8
..................................................TGTAAACATCCTACACACTCAGCT...................................................................................... 24 1 2 3.50 7 7
..................................................TGTAAACATCCGACACTCTCAGC....................................................................................... 23 1 2 3.50 7 7
..................................................TGTAAACATCCTACACTCTCAACT...................................................................................... 24 1 2 3.50 7 7
..................................................TGTAAACATCCTACACTCTCAGCAA..................................................................................... 25 2 2 3.00 6 6
.................................................CTGTAAACATCCTACACTCTCAGCT...................................................................................... 25 0 1 3.00 3 3
..................................................TGTAAACATGCTACACTCTGAGCT...................................................................................... 24 2 2 3.00 6 6
..................................................TGTAAACATCCTACACTCTCAA........................................................................................ 22 1 2 3.00 6 6
..................................................TGTAAACATCCTACACTCTCAGCTAAA................................................................................... 27 3 2 3.00 6 6
..................................................TGTAAACATCCTACACTCTCAGCTGA.................................................................................... 26 1 2 3.00 6 6
..................................................TGTAAACATCCTACGCGCTCAGCT...................................................................................... 24 2 2 3.00 6 6
..........................................................................................CTGGGAGAAGGCTGTTTACTC................................................. 21 0 1 3.00 3 3
..................................................TGTAAACATCCTACACTCTCAGCC...................................................................................... 24 1 2 2.50 5 5
..................................................TGTAAACATCCTACACTCTCAGCCT..................................................................................... 25 2 2 2.50 5 5
..................................................TGTAAACATCCTACACTCTCAGCTGTA................................................................................... 27 1 2 2.50 5 5
..................................................TGTAAACATCCGACACTCTCA......................................................................................... 21 1 2 2.50 5 5
..................................................TGTAAACATCCTACACTCTGAGC....................................................................................... 23 1 2 2.50 5 5
..................................................TGTAAACATCCTAAACTCTCAGCT...................................................................................... 24 1 2 2.50 5 5
..................................................TGTAAACATCCTACACTCTCATC....................................................................................... 23 1 2 2.50 5 5
..................................................TGTAAAGATGCTACACTCTCAGCT...................................................................................... 24 2 2 2.50 5 5
..................................................TGTAAACATCCTACACTCTCAGCTAGA................................................................................... 27 3 3 2.33 7 7
..................................................TGTAAACATCCTCCACTCTCAGCT...................................................................................... 24 1 2 2.00 4 4
..................................................TGTAAACATCCTACACCCTCAGCT...................................................................................... 24 1 2 2.00 4 4
..................................................TGTAAACATCCTCCACTCTCAGC....................................................................................... 23 1 2 2.00 4 4
..................................................TGTAAACATCCTACACGCTCAGC....................................................................................... 23 1 2 2.00 4 4
..................................................TGTAAACATCCTACACTCTCAGCTGTGGA................................................................................. 29 0 1 2.00 2 2
..................................................TGTAAACATACTACACTCTAAGCT...................................................................................... 24 2 2 2.00 4 4
..................................................TGTAAACATACTACACTCTCAGCT...................................................................................... 24 1 2 2.00 4 4
..................................................TGTAAACATCCTACACTCTCAGCAT..................................................................................... 25 2 2 2.00 4 4
..................................................TGTAAACATCCTACACTCTCAGCTTTAGT................................................................................. 29 3 1 2.00 2 2
..................................................TGTAAACATCGTACACTCTCAGCT...................................................................................... 24 1 2 2.00 4 4
..................................................TGTAAACATCCTACACTCTCAGCTTTT................................................................................... 27 2 2 2.00 4 4
..................................................TGTAAACATCCTACACTCT........................................................................................... 19 0 2 2.00 4 4
..................................................TGTAAACATCCTACACTCTCAGCTATT................................................................................... 27 2 2 1.50 3 3
..................................................TGTAAACATCTTACACTCTCAGCT...................................................................................... 24 1 2 1.50 3 3
..................................................GGTAAACATCCTACACTCTCAGCT...................................................................................... 24 1 2 1.50 3 3
..................................................TGTAAACATCCTACGCTCTCAGC....................................................................................... 23 1 2 1.50 3 3
..................................................TGTAAACATCCTACACTCTCAGG....................................................................................... 23 1 2 1.50 3 3
..................................................TGTAAACATCCTACACTCTAAGC....................................................................................... 23 1 2 1.50 3 3
..................................................TGTAAAGATACTACACTCTAAGCT...................................................................................... 24 3 2 1.50 3 3
..................................................TGTAAAGATACTACACTCTCAGCT...................................................................................... 24 2 2 1.50 3 3
..................................................TGTAAACATTCTACACTCTCAGCT...................................................................................... 24 1 2 1.50 3 3
..................................................TGTAAACATCCAACACTCTCAGC....................................................................................... 23 1 2 1.50 3 3
..................................................TGTAAAGATCCTACACTCTCAGCT...................................................................................... 24 1 2 1.50 3 3
..................................................TGTAAACATCCTACACTCTCAAA....................................................................................... 23 2 2 1.50 3 3
..................................................TGTAAACATCCTACACTCTCAGTT...................................................................................... 24 1 2 1.50 3 3
..................................................TGTAAACATCCTACACACTCAGC....................................................................................... 23 1 2 1.50 3 3
..................................................TGTAAAAATCCTACACTCTCAGC....................................................................................... 23 1 2 1.50 3 3
..................................................TGTAAACATGCTACACTCTCAGCT...................................................................................... 24 1 2 1.50 3 3
..................................................TGTAAACATCCTACACTCTCAGCTATA................................................................................... 27 2 2 1.50 3 3
..........................................................................................CTGGGAGAAGGCTGTTTACTCTT............................................... 23 1 1 1.00 1 1
..................................................TGTAAACATACTACACTCTGAGCT...................................................................................... 24 2 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTCAGCAAA.................................................................................... 26 3 2 1.00 2 2
.................................................CTGTAAACATCCTACACTCTCA......................................................................................... 22 0 1 1.00 1 1
..................................................TGTAAACATCCTACACTCTCAGCTGTGGAATT.............................................................................. 32 2 1 1.00 1 1
..................................................TGTAAACATCCTACACTCTCAGCTAAT................................................................................... 27 3 2 1.00 2 2
..................................................TGTAAACATGCTACACTCTGAGC....................................................................................... 23 2 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTAAGCTT..................................................................................... 25 2 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTTAGC....................................................................................... 23 1 2 1.00 2 2
..................................................TGTAAACATCCGACACTCTCATCT...................................................................................... 24 2 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTCAGCTGTGGAATTT............................................................................. 33 2 1 1.00 1 1
..................................................TGTGAACATCCTACACTCTCAGCT...................................................................................... 24 1 3 1.00 3 3
..................................................TGTAAAGATCCTACACTCTCAGC....................................................................................... 23 1 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTCAGCTGTGGAAT............................................................................... 31 1 1 1.00 1 1
..................................................TGTAAACATCCTACACTCTCATCTT..................................................................................... 25 2 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTGAGCTT..................................................................................... 25 2 2 1.00 2 2
..................................................TGTAAACATGCTACACTCTCA......................................................................................... 21 1 2 1.00 2 2
..................................................TGTAAAGATCCTACACTCTGAGCT...................................................................................... 24 2 2 1.00 2 2
..................................................TATAAACATCCTACACTCTCAGCT...................................................................................... 24 1 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTCAGCTGTAAA................................................................................. 29 2 2 1.00 2 2
...........................................................................................TGGGAGAAGGCTGTTTACTCTA............................................... 22 1 1 1.00 1 1
..................................................TGTAAACATCCTGCACTCTCACC....................................................................................... 23 2 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTCAGCTGTGGAAA............................................................................... 31 0 1 1.00 1 1
..................................................TGTAAACATCCTACACTCTCAGCGT..................................................................................... 25 2 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTCAGCTTAAGA................................................................................. 29 3 1 1.00 1 1
..................................................TGTAAACATTCTACACTCTTAGCT...................................................................................... 24 2 2 1.00 2 2
..................................................TGTAAACATCATACACTCTCAGCT...................................................................................... 24 1 2 1.00 2 2
..................................................TGTAAACATCCTACACTCTAA......................................................................................... 21 1 2 1.00 2 2
..........................................................................................CTGGGAGAAGGCTGTTTACTCA................................................ 22 1 1 1.00 1 1
..................................................GGTAAACATCCTACACTCTCAGC....................................................................................... 23 1 2 1.00 2 2
..........................................................................................ATGGGAGAAGGCTGTTTACTC................................................. 21 1 1 1.00 1 1
..................................................TGTAAAAATGCTACACTCTAAGCT...................................................................................... 24 3 3 0.67 2 2
..................................................TGTAAAGATGCTACACTCTGAGCT...................................................................................... 24 3 5 0.60 3 3
..................................................TGTAAACATCCTACACTCTCAGAA...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCACT.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAAACATCCTGCGCTCTCAGCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACGCTCA......................................................................................... 21 1 2 0.50 1 1
..................................................TGTAAACATGCTACACTCTAAGC....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGTAA..................................................................................... 25 3 2 0.50 1 1
..................................................TGTAAAGATTCTACACTCTGAGCT...................................................................................... 24 3 2 0.50 1 1
..................................................TGTAAACATTCTACACTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAAGATCCTACACTCTCA......................................................................................... 21 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCTGAA................................................................................... 27 2 2 0.50 1 1
..................................................TGTAAACATCCGACACTCTCAGCTAT.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAGACATCCTACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGACT..................................................................................... 25 3 2 0.50 1 1
..................................................TGTAAACATCATACACTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAACATCCTACACCCTCA......................................................................................... 21 1 2 0.50 1 1
..................................................TGTAAAAATCCTACACTCTGAGCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACTCTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCAGT.................................................................................... 26 1 2 0.50 1 1
..................................................TGTAAAAATCCTACACTCTAAGCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCGGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGAAAACATCCTACACTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAACATACTACACTCTCAG........................................................................................ 22 1 2 0.50 1 1
..................................................TGTAAACATCGTACACTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGAAT..................................................................................... 25 3 2 0.50 1 1
..................................................TGTAAACATCCTACTCTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAACGTCCTACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCCCAGA....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTTCACTCTCAGCTTT.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGGT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTATACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGTA...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCATA.................................................................................... 26 3 2 0.50 1 1
..................................................CGTAAACATCCTACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTTAGCTGT.................................................................................... 26 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCATT.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAGAGATCCTCCACTCTCAGCT...................................................................................... 24 3 2 0.50 1 1
..................................................TGTAAACATACTACACTCTCAGCTTT.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCTAAGT.................................................................................. 28 3 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTGA......................................................................................... 21 1 2 0.50 1 1
..................................................TGTAAATATCCTACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAATATCCTACACTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAACATCCTACGCCCTCAGC....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTGAGCTA..................................................................................... 25 2 2 0.50 1 1
..................................................TGTAAACATCCTACCCTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAGCATCCTACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAATATCCTACACTCTAAGCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAAAATACTACACTCTCAGCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCT......................................................................................... 21 1 2 0.50 1 1
..................................................AGTAAACATCCTACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAAGATCCTACACTCTGAGCG...................................................................................... 24 3 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCACCG...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCGACACTCTCACCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCATA....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACGCTCTCAG........................................................................................ 22 1 2 0.50 1 1
..................................................TGTAAACATTCTACACTCTGAGCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCATT....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCGA..................................................................................... 25 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCGAA.................................................................................... 26 3 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTGAGA....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAAC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAACATCCTACCCTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTAAGAT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAACG...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCTTTTT.................................................................................. 28 3 2 0.50 1 1
..................................................TGTAAACATGCTACACTCTCAGCA...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTCCACTCTCACCGGT.................................................................................... 26 3 2 0.50 1 1
..................................................TGTAAACATACTACACTCTAAGC....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTAAGT....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAAAATCCTACACTCTCAGCTGA.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAAACATCCTACCCTCTCAGA....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTGAGCA...................................................................................... 24 2 2 0.50 1 1
...................................................GTAAACATCCTACACTCTCAGCTGT.................................................................................... 25 0 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTAAGCTTTT................................................................................... 27 3 2 0.50 1 1
..................................................TGTAAACATGCTACACTCTAAGCTAT.................................................................................... 26 3 2 0.50 1 1
..................................................TGTAAAAATCCTACACTCTGAGC....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTAAGCTGT.................................................................................... 26 1 2 0.50 1 1
..................................................TGTAAACATCCTACGCGCTCAGC....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTTCACTCTCA......................................................................................... 21 1 2 0.50 1 1
..................................................TGTAAACATCCTGCACTCTCATCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTATACTCTCAGC....................................................................................... 23 1 2 0.50 1 1
..................................................TGTAAACATCCTACACGCTCAGT....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCACCGGT.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAAACATCCTACACGCTCAGA....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCTACAGTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAAAATGCTACACTCTCAGCT...................................................................................... 24 2 2 0.50 1 1
...................................................GTAAACATCCTACACTCTCAGCT...................................................................................... 23 0 2 0.50 1 1
......................................................AACATCCTACACTCTCAGCT...................................................................................... 20 0 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAAT....................................................................................... 23 2 2 0.50 1 1
..................................................TGTAAACATCCAACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCTTA.................................................................................... 26 2 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCAGCTTAA................................................................................... 27 3 2 0.50 1 1
..................................................TGTAAACATCCTACACTCTCATCG...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTGCACTCTCACCT...................................................................................... 24 2 2 0.50 1 1
..................................................TGTAAACATCCTACACGCTCAGCTAT.................................................................................... 26 2 2 0.50 1 1
..................................................TTTAAACATCCTACACTCTCAGCT...................................................................................... 24 1 2 0.50 1 1
..................................................TGTAAACATGCTACACTCTGAG........................................................................................ 22 2 3 0.33 1 1
..................................................TGTAAAAATCCTACACTCTCAGCTT..................................................................................... 25 2 3 0.33 1 1
..................................................TGTAAACATCCCACACTCTCAGCT...................................................................................... 24 1 3 0.33 1 1
..................................................TGTAAACATTCTACACTCTAAGCT...................................................................................... 24 2 3 0.33 1 1
..................................................TGTAAACATCCTACACT............................................................................................. 17 0 3 0.33 1 1
..................................................TTTAAACATCCTACACTCTCAGT....................................................................................... 23 2 3 0.33 1 1
..................................................TGTAAACATCCTGCACTCTCAGA....................................................................................... 23 2 3 0.33 1 1
..................................................TGTAAACATCCTACACTCTCAAAA...................................................................................... 24 3 3 0.33 1 1
..................................................TGTAAAGATGCTACACTCTCAGCTA..................................................................................... 25 3 3 0.33 1 1
..................................................TGTAAACATCCTACACACTCAGCA...................................................................................... 24 2 3 0.33 1 1
..................................................TGTAAACATACTACACTCTCAGT....................................................................................... 23 2 3 0.33 1 1
..................................................TGTAAACATCCTGCGCTCTCATCT...................................................................................... 24 3 4 0.25 1 1
..........................................................................................CTGGGAGAAGGCTGTTTAA................................................... 19 1 4 0.25 1 1
..................................................TGTAAAGATGCTACACTCTCAGC....................................................................................... 23 2 4 0.25 1 1
..................................................TGTAAACATTCTACACTCTAAGCC...................................................................................... 24 3 4 0.25 1 1
..................................................TGTAAAGATGCTACACTCTGAGC....................................................................................... 23 3 9 0.22 2 2
..................................................TGTAAACATCCTACAC.............................................................................................. 16 0 5 0.20 1 1
..................................................TGTAAACATGCTACAATCTGAGCT...................................................................................... 24 3 5 0.20 1 1
..................................................TGTAAACATCCTACGCGCTCATC....................................................................................... 23 3 8 0.13 1 1
..................................................TGTAAACATGCTACACTCTAA......................................................................................... 21 2 8 0.13 1 1
..................................................TGTAAAGATGCTACACTCTAAGC....................................................................................... 23 3 8 0.13 1 1
..................................................TGTAAACATTCTACACTCTCT......................................................................................... 21 2 9 0.11 1 1

Anti-sense strand reads

ACACGACGACTGGTGGTTGGGGTGGGATCTCTCGTGACTCACTGTCTATGACATTTGTAGGATGTGAGAGTCGACACCTTTCACTCTTTCGACCCTCTTCCGACAAATGAGAGAGACGGAACCTTTAGTTGATTTCTCTTTACCTAGGCCTCATAAAAAG

***********************************(((((...((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....)))).)))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:50 AM