ID:

eca-mir-25

 Coordinate:

chr13:8034246-8034329 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.3 -36.3 -36.3

Sense Strand Reads

GAGTTCAGAAGAGTCTGGTCTCCCTCACAGGACAGCTGAACACCGGGACTGGCCAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCCTGGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCCCCACACGGCGGATGTTTGGGGGGACGGGAGGGGCCTCCACTCGTTTTGTG

************************************************..((((.((((((..((((.(((((..(((((((..((((........))))..))))).)).))))).))))..)))))).))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.....................................................................................................CATTGCACTTGTCTCGGTCTGA............................................................. 22 0 1 5825.00 5825 5825
.....................................................................................................CATTGCACTTGTCTCGGTCT............................................................... 20 0 1 1023.00 1023 1023
.....................................................................................................CATTGCACTTGTCTCGGTCTGAA............................................................ 23 1 1 445.00 445 445
.....................................................................................................CATTGCACTTGTCTCGGTCTGT............................................................. 22 1 1 283.00 283 283
.....................................................................................................CATTGCACTTGTCTCGGTCTG.............................................................. 21 0 1 279.00 279 279
.....................................................................................................CATTGCACTTGTCTCGGTCTGAT............................................................ 23 1 1 208.00 208 208
.....................................................................................................CATTGCACTTGTCTCGGTC................................................................ 19 0 1 188.00 188 188
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAA........................................................... 24 1 1 106.00 106 106
.....................................................................................................CATTGCACTTGTCTCGGTCTGG............................................................. 22 1 1 74.00 74 74
.....................................................................................................CATTGCACTTGTCTCGGTCTGATT........................................................... 24 2 1 63.00 63 63
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAT........................................................... 24 2 1 63.00 63 63
.....................................................................................................CATTGCACTTGTCTCGGTCTGAG............................................................ 23 1 1 62.00 62 62
.....................................................................................................CATTGCACTTGTCTCGGTCTT.............................................................. 21 1 1 36.00 36 36
.....................................................................................................CATTGCACTTGTCTCGGTCTGATA........................................................... 24 1 1 35.00 35 35
.....................................................................................................CATTGCACTTGTCTCGGTCGGA............................................................. 22 1 1 34.00 34 34
.....................................................................................................CATTGCACTTGTCTCGGTCTGTT............................................................ 23 2 1 31.00 31 31
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGT........................................................... 24 2 1 28.00 28 28
.....................................................................................................CATTGCACTTGTCTCGGTCAGA............................................................. 22 1 1 26.00 26 26
.....................................................................................................CATTGCACTTGGCTCGGTCTGA............................................................. 22 1 1 22.00 22 22
.....................................................................................................CATTGCACTTGTGTCGGTCTGA............................................................. 22 1 1 21.00 21 21
.....................................................................................................CATTGCACTTGTCTCGGTCTGTAA........................................................... 24 2 1 21.00 21 21
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAG........................................................... 24 2 1 19.00 19 19
.....................................................................................................CATTGCACTTGTCTGGGTCTGA............................................................. 22 1 1 17.00 17 17
.....................................................................................................CATTGCACTTGTATCGGTCTGA............................................................. 22 1 1 16.00 16 16
.....................................................................................................CATTGCACTTGTCTCGGTCTGTA............................................................ 23 2 1 16.00 16 16
.....................................................................................................CATTGCACTTGTCTCGGTCTGC............................................................. 22 1 1 16.00 16 16
......................................................................................................ATTGCACTTGTCTCGGTCTGA............................................................. 21 0 1 13.00 13 13
.....................................................................................................CATTGCACTTGTCTCGGTCA............................................................... 20 1 1 11.00 11 11
.....................................................................................................CATTGCACTTGTCTCGGTCG............................................................... 20 1 1 11.00 11 11
.....................................................................................................CATTGCACTTGACTCGGTCTGA............................................................. 22 1 1 11.00 11 11
...............................................................AGGCGGAGACTTGGGCAATTGCT.................................................................................................. 23 0 1 11.00 11 11
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGA........................................................... 24 1 1 10.00 10 10
.....................................................................................................CATTGCACTTGTCTCGATCTGA............................................................. 22 1 1 9.00 9 9
.....................................................................................................CATTGCACTTGTCTAGGTCTGA............................................................. 22 1 1 8.00 8 8
.....................................................................................................CATTGCGCTGGTCTCGGTCTGA............................................................. 22 2 1 7.00 7 7
.....................................................................................................CATTGCACTTGTCTCGGTCGGT............................................................. 22 2 1 7.00 7 7
.....................................................................................................CATTGCACTTGTCTCGGTCTGTAT........................................................... 24 3 1 7.00 7 7
.....................................................................................................CATTGCACTGGTCTCGGTCGGA............................................................. 22 2 1 7.00 7 7
.....................................................................................................CATTGCACTGGTCTCGGTCAGA............................................................. 22 2 1 7.00 7 7
.....................................................................................................CATTGCACTTGTGTCGGTCT............................................................... 20 1 1 7.00 7 7
.....................................................................................................TATTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 6.00 6 6
.....................................................................................................CATTGCACTGGTCTCGGTCTGA............................................................. 22 1 1 6.00 6 6
.....................................................................................................CATTGCACTTGTTTCGGTCTGA............................................................. 22 1 1 6.00 6 6
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAGA.......................................................... 25 3 1 5.00 5 5
.....................................................................................................AATTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 5.00 5 5
.....................................................................................................CATTGCCCTTGTCTCGGTCTGA............................................................. 22 1 1 5.00 5 5
.....................................................................................................CATTGCACTTGTCTCGGTCTA.............................................................. 21 1 1 5.00 5 5
.....................................................................................................CATTGCACTAGTCTCGGTCGGA............................................................. 22 2 1 5.00 5 5
.....................................................................................................GATTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 4.00 4 4
.....................................................................................................CATTGCACTTGTCTCGGTCTTT............................................................. 22 2 2 4.00 8 8
.....................................................................................................CATTGCACCTGTCTCGGTCTGA............................................................. 22 1 1 4.00 4 4
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAG.......................................................... 25 1 1 4.00 4 4
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAT.......................................................... 25 2 1 4.00 4 4
......................................................................................................ATTGCACTTGTCTCGGTCT............................................................... 19 0 1 4.00 4 4
...............................................................AGGCGGAGACTTGGGCAATTGC................................................................................................... 22 0 1 4.00 4 4
......................................................................................GGACGCTGCCCCGGGCATTGCACTTGTCTCGGTCTGA............................................................. 37 1 1 4.00 4 4
.....................................................................................................CGTTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 4.00 4 4
.....................................................................................................CATTGCACTTGGCTCGGTCT............................................................... 20 1 1 4.00 4 4
.....................................................................................................CATTGCACTTGTCTCGGTCTGACT........................................................... 24 1 1 4.00 4 4
.....................................................................................................CATTGCACTTGTCTCGGTCTGGA............................................................ 23 2 1 4.00 4 4
.....................................................................................................CATTGCACTTGTCTCGCTCTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTGTCGGTCTGT............................................................. 22 2 1 3.00 3 3
.....................................................................................................CATTGCACTTGTATCGGTCT............................................................... 20 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTTTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCGCTTGTCTCGGTCTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGGCTCGGTCTGC............................................................. 22 2 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGC........................................................... 24 2 1 3.00 3 3
.....................................................................................................CATTGCACTGGTCTCGGTCG............................................................... 20 2 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTGGGTCTG.............................................................. 21 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGT................................................................. 18 0 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTCTAT............................................................. 22 2 1 3.00 3 3
.....................................................................................................CATTGCACTTATCTCGGTCTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAGT.......................................................... 25 3 1 3.00 3 3
.....................................................................................................CATTGCGCTTGTCTCGGTCT............................................................... 20 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTCCGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTCTGGAA........................................................... 24 2 1 3.00 3 3
.....................................................................................................CATTGCGCTAGTCTCGGTCTGA............................................................. 22 2 1 3.00 3 3
.....................................................................................................CATTGCACTTTTCTCGGTCTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGGCTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGTTCTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTCGGAA............................................................ 23 2 1 3.00 3 3
.....................................................................................................CATTGCACTTGCCTCGGTCTGA............................................................. 22 1 1 3.00 3 3
.....................................................................................................CATTGCACTTGTCTCGGTCTGATG........................................................... 24 2 1 3.00 3 3
.....................................................................................................CATTGCACTAGTCTCGGTCCGA............................................................. 22 2 1 2.00 2 2
.....................................................................................................CATTGCACTAGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTGTCGGTC................................................................ 19 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGTTT........................................................... 24 3 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGCA............................................................ 23 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTTA............................................................. 22 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTTGGTCTGA............................................................. 22 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGTT.......................................................... 25 3 1 2.00 2 2
.....................................................................................................CATTGCACTTGTATCGGTCTGATT........................................................... 24 3 1 2.00 2 2
.....................................................................................................CATTGCACTGGTCTCGGTCGG.............................................................. 21 2 1 2.00 2 2
.....................................................................................................CATTGCCCTGGTCTCGGTCTGA............................................................. 22 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTGTCGGTCTGAAAG.......................................................... 25 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCCGT............................................................. 22 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTATCGGTCTGAA............................................................ 23 2 1 2.00 2 2
.....................................................................................................CATTTCACTTGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGCCTCGGTCTGAA............................................................ 23 2 1 2.00 2 2
...............................................................AGGCGGAGACTTGGGCAATTG.................................................................................................... 21 0 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGCT............................................................ 23 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTGTCGGTCTGAAT........................................................... 24 3 1 2.00 2 2
...............................................................AGGCGGAGACTTGGGCAATTGCTT................................................................................................. 24 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGAT.......................................................... 25 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCAA.............................................................. 21 2 2 2.00 4 4
......................................................................................................ATTGCACTTGTCTCGGTCTGT............................................................. 21 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCAGAA............................................................ 23 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGGCTCGGTCTGT............................................................. 22 2 2 2.00 4 4
.....................................................................................................CATTGCACTTGTCTCGGTTTG.............................................................. 21 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTGGGTCTGAT............................................................ 23 2 1 2.00 2 2
.....................................................................................................CATTGCACTCGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 2
.....................................................................................................CATTGCGCTAGTCTCGGTCCGA............................................................. 22 3 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCGG.............................................................. 21 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAC........................................................... 24 2 1 2.00 2 2
.....................................................................................................CATTGCAGTTGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 2
.....................................................................................................CATTGCGCTCGTCTCGGTCTGA............................................................. 22 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGACA........................................................... 24 0 1 2.00 2 2
.....................................................................................................CATTGCACTTGACTCGGTCTGAA............................................................ 23 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCC............................................................... 20 1 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGGT............................................................ 23 2 1 2.00 2 2
.....................................................................................................CATTGCACTTGTCTGGGTCT............................................................... 20 1 2 1.50 3 3
.....................................................................................................CATTGCGCTGGTCTCGGTCAGA............................................................. 22 3 3 1.33 4 4
.....................................................................................................CATTGCACTGGTCTCGGTC................................................................ 19 1 1 1.00 1 1
......................................................................................................ATTGCACTTGTCTCGGTC................................................................ 18 0 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAAA......................................................... 26 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGATC................................................................ 19 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCCCGGTCTGAAA........................................................... 24 2 1 1.00 1 1
.....................................................................................................CATTGCGCTGGTCTCGGTCGGA............................................................. 22 3 2 1.00 2 2
.....................................................................................................CATTGCACTTGTGTCGGTCTGAT............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTAGTCTCGGTCAGA............................................................. 22 2 2 1.00 2 2
.....................................................................................................CATTGCACTTGTCTCGATCTGAT............................................................ 23 2 1 1.00 1 1
......................................................................................................CTTGCACTTGTCTCGGTCT............................................................... 19 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGCAT........................................................... 24 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGAATT.......................................................... 25 3 1 1.00 1 1
.....................................................................................................TATTGCACTTGTCTCGGTCTGAT............................................................ 23 2 1 1.00 1 1
.....................................................................................................CTTTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 1
...............................................................AGGCGGAGACTTGGGCAATAGCT.................................................................................................. 23 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGCCTCGGTCCGA............................................................. 22 2 1 1.00 1 1
...............................................................AGGCGGAGACTTGGGCAATTGCTA................................................................................................. 24 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGAAT......................................................... 26 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGATAAG......................................................... 26 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGGCTCGGTCTGAA............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTGGGTCTGAA............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCAGAT............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGTAAA.......................................................... 25 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGTGTCGGTCTGG............................................................. 22 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGATCTGAAA........................................................... 24 2 1 1.00 1 1
.....................................................................................................CATTGCACTTCTCTCGGTCTGA............................................................. 22 1 2 1.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTAA............................................................. 22 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGATATT......................................................... 26 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGAA.......................................................... 25 2 1 1.00 1 1
.....................................................................................................CGTTGCACTTGTCTCGGTCT............................................................... 20 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTAGGA............................................................. 22 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTTTCGGTCT............................................................... 20 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTAAG............................................................ 23 2 1 1.00 1 1
......................................................................................................ATTGCACTTGTCTCGGTCTGAAA........................................................... 23 1 1 1.00 1 1
...............................................................................................CCGTGGCATTGCACTTGTCTCGGTCTGA............................................................. 28 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAAAG........................................................ 27 3 1 1.00 1 1
..............................................................................................CCCGTGGCATTGCACTTGTCTCGGTCTGA............................................................. 29 2 1 1.00 1 1
....................................................................................................GCATTGCACTTGTCTCGGTCTGT............................................................. 23 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGTTAA.......................................................... 25 3 1 1.00 1 1
.....................................................................................................CATTGCACTGGTCTCGGTCTGAT............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTGGGTCTGAAA........................................................... 24 2 1 1.00 1 1
.....................................................................................................CATTGCATTTGTCTCGGTCT............................................................... 20 1 1 1.00 1 1
.....................................................................................................CATAGCACTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGGCTCGGTCTG.............................................................. 21 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGACTGA............................................................. 22 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCAGAAA........................................................... 24 2 1 1.00 1 1
.....................................................................................................CATTGCACTAGTCTCGGTCGG.............................................................. 21 2 1 1.00 1 1
.....................................................................................................CATTGCGCTAGTCTCGGTCGGA............................................................. 22 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGGCTCGGTCTGACA........................................................... 24 1 1 1.00 1 1
.....................................................................................................CATTGCGCTCGTCTCGGTCAGA............................................................. 22 3 1 1.00 1 1
...............................................................AGGCGGAGACTTGGGCAATTGCTGGACGCTGCCCCGGG................................................................................... 38 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGGCTCGGTCTGAT............................................................ 23 2 1 1.00 1 1
.....................................................................................................CGTTGCACTTGTCTCGGTCTGAT............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAA.......................................................... 25 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGACATT......................................................... 26 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCCGAA............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGATCTGAA............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCACTGGTCTCGGTCCG.............................................................. 21 2 2 1.00 2 2
.....................................................................................................CATTGCACTAGTCTCGGTCTGT............................................................. 22 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGCCTGA............................................................. 22 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTGTCGGTCTGATT........................................................... 24 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGAATTT......................................................... 26 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGGCTCGGTCTGAAA........................................................... 24 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTAT............................................................... 20 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGGCTCGGTC................................................................ 19 1 1 1.00 1 1
...............................................................AGGCGGAGACTTGGGCAATTGGT.................................................................................................. 23 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGTG............................................................ 23 2 1 1.00 1 1
.....................................................................................................CATTGCGCTAGTCTCGGTCTGAT............................................................ 23 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCGGTT............................................................ 23 3 1 1.00 1 1
.....................................................................................................CATTGCGCTCGTCTCGGTCCGA............................................................. 22 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGATC........................................................... 24 2 1 1.00 1 1
.....................................................................................................CATTGCACTCGTCTCGGTCGGA............................................................. 22 2 1 1.00 1 1
.....................................................................................................TATTGCACTTGTCTCGGTCT............................................................... 20 1 1 1.00 1 1
.....................................................................................................CATTGCACTCGTCTCGATCTGA............................................................. 22 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGCTCT............................................................... 20 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGCCTCGGTCTG.............................................................. 21 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTA................................................................ 19 1 1 1.00 1 1
.....................................................................................................CATTGCACTAGTCTCGGTCT............................................................... 20 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGCCTCGGTCTGT............................................................. 22 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTCAAA........................................................... 24 2 1 1.00 1 1
.....................................................................................................TATTGCACTTGTCTCGGTCTGATT........................................................... 24 3 1 1.00 1 1
.....................................................................................................CATTGCACTGGTCTCGGTCTG.............................................................. 21 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTATCGGTCTGAGT........................................................... 24 3 1 1.00 1 1
.....................................................................................................CATTGCACTTGTGTCGGTCTG.............................................................. 21 1 1 1.00 1 1
.....................................................................................................CATTGCACTCGTCTCGGTCTGT............................................................. 22 2 1 1.00 1 1
.....................................................................................................CATTGCACTGGTCTCGGTCTGAAT........................................................... 24 3 1 1.00 1 1
.....................................................................................................CATTGCACTCGTCTCGGTCCGA............................................................. 22 2 1 1.00 1 1
............................................................................................TTCCCGTGGCATTGCACTTGTCTCGGTCTGA............................................................. 31 3 1 1.00 1 1
.....................................................................................................CACTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCGGAAA........................................................... 24 2 1 1.00 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCAGT............................................................. 22 2 2 1.00 2 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGATTT.......................................................... 25 3 2 1.00 2 2
.....................................................................................................CATTCCACTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 1
.....................................................................................................CATTGCACATGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 1
.....................................................................................................CATTTCACTTGTCTCGGTCTG.............................................................. 21 1 1 1.00 1 1
......................................................................................................ATTGCACTTGTCCCGGCCTGAAA........................................................... 23 3 4 0.75 3 3
.....................................................................................................CATTGCACTTGTCTCGATCTGT............................................................. 22 2 3 0.67 2 2
.....................................................................................................CATTGCCCTGGTCTCGGTCGGA............................................................. 22 3 5 0.60 3 3
.....................................................................................................CATTGCACTTGTCTCGTTC................................................................ 19 1 2 0.50 1 1
.....................................................................................................CATTGCACTTCTCTCGGTCTGT............................................................. 22 2 2 0.50 1 1
.....................................................................................................CATTGCACTTGTCTCGGTAA............................................................... 20 2 4 0.50 2 2
......................................................................................................ATTGCACTTGTCGCGGCCTGAAA........................................................... 23 3 2 0.50 1 1
.....................................................................................................CATTGCGCTAGTCTCGGTCAGA............................................................. 22 3 4 0.50 2 2
.....................................................................................................CATTGCGCTCGTCTCGGTCGGA............................................................. 22 3 2 0.50 1 1
.....................................................................................................CATTGCACTTGTCTGGGTCTGG............................................................. 22 2 2 0.50 1 1
.....................................................................................................CATTGCACTTGTCTCGCTCTGAA............................................................ 23 2 2 0.50 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTGATGT.......................................................... 25 3 2 0.50 1 1
.....................................................................................................CATTGCACTTGTCTCGGTTTGT............................................................. 22 2 2 0.50 1 1
.....................................................................................................CATTGCACTTGTCTCGTTCTGT............................................................. 22 2 2 0.50 1 1
.....................................................................................................CATTGCACTTCTCTCGGTCTGAA............................................................ 23 2 2 0.50 1 1
.....................................................................................................CATTGCACTTGGCTCGGTCTGG............................................................. 22 2 2 0.50 1 1
.....................................................................................................CATTGCCCTCGTCTCGGTCTGA............................................................. 22 2 2 0.50 1 1
.....................................................................................................CATTGCACTTGTGTCGGTCTGAAG........................................................... 24 3 2 0.50 1 1
.....................................................................................................CATTGCACTGGTCTCGGTCAGAT............................................................ 23 3 2 0.50 1 1
.....................................................................................................CATTGCATTTGTCTCGGTCTGAA............................................................ 23 2 2 0.50 1 1
.....................................................................................................CATTGCACTAGTCTCGGTCG............................................................... 20 2 2 0.50 1 1
.....................................................................................................CATTGCACTTATCTCGGTCTGT............................................................. 22 2 3 0.33 1 1
.....................................................................................................CATTGCACTGGTCTCGGTCGGT............................................................. 22 3 3 0.33 1 1
.....................................................................................................CATTGCACTTGTCTGGGTC................................................................ 19 1 3 0.33 1 1
.....................................................................................................CATTGCCCTGGTCTCGGTCTGAT............................................................ 23 3 3 0.33 1 1
......................................................................................................ATTGCACTTGTCCCGGTCTGTAA........................................................... 23 3 3 0.33 1 1
.....................................................................................................CATTGCACTTGTCTCGGTCTATA............................................................ 23 3 3 0.33 1 1
.....................................................................................................CATTGCCCTCGTCTCGGTCGGA............................................................. 22 3 3 0.33 1 1
.....................................................................................................TATTGCACTTGTCTCGGCCTGA............................................................. 22 2 3 0.33 1 1
.....................................................................................................CATTGCCCTAGTCTCGGTCTGA............................................................. 22 2 3 0.33 1 1
.....................................................................................................CATTGCCCTAGTCTCGGTCGGA............................................................. 22 3 4 0.25 1 1
.....................................................................................................CATTGCACTAGTCTCGGTCAGAA............................................................ 23 3 4 0.25 1 1
.....................................................................................................CATTGCACTTGTCTCGGGCTGTA............................................................ 23 3 4 0.25 1 1
.....................................................................................................CATTGCACTTGTCTCGGATT............................................................... 20 2 4 0.25 1 1
.....................................................................................................TATTGCACTTGTCCCGGCCTGACA........................................................... 24 3 4 0.25 1 1
.....................................................................................................CATTGCACTTGTCTCTGTCTGAA............................................................ 23 2 5 0.20 1 1
.....................................................................................................CATTGCACTTGGCTCGGTCTGTT............................................................ 23 3 5 0.20 1 1
.....................................................................................................CATTGCACTTGTCTCGGAAT............................................................... 20 2 5 0.20 1 1
.....................................................................................................CATTGCACTGGTCTCGGTCA............................................................... 20 2 6 0.17 1 1
.....................................................................................................CATTGCACTTGTCTCGGTGA............................................................... 20 2 9 0.11 1 1
.....................................................................................................TATTGCACTTGGCTCGGCCTGA............................................................. 22 3 10 0.10 1 1
.....................................................................................................CATTGCACTTGTCTCGGTAAA.............................................................. 21 3 20 0.10 2 2
.....................................................................................................CATTGCACTAGTCTCGGTCAA.............................................................. 21 3 17 0.06 1 1

Anti-sense strand reads

CTCAAGTCTTCTCAGACCAGAGGGAGTGTCCTGTCGACTTGTGGCCCTGACCGGTCACAACTCTCCGCCTCTGAACCCGTTAACGACCTGCGACGGGACCCGTAACGTGAACAGAGCCAGACTGTCACGGCCGGGGTGTGCCGCCTACAAACCCCCCTGCCCTCCCCGGAGGTGAGCAAAACAC

**********************************************..((((.((((((..((((.(((((..(((((((..((((........))))..))))).)).))))).))))..)))))).))))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:38 AM