ID:

eca-mir-219-2

 Coordinate:

chr25:31667362-31667458 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-62.6 -61.6 -61.6

Sense Strand Reads

GGCGCTTTTAAGGAGCAAAGCGGAACCCCGCCGGACACCCGGGACCCTGAACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGGCCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGGGCGCAACAGGGGCGGGAGCCGCAGGGACAGAGCTCAGCGCGGGTGAGACCC

***********************************..((((...(((((..(((.(((((((.(((((.(((.(((((..(((((((((((.....(((...)))....)))))))))))..)))))))).))))).)))))))))).....))))).))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
....................................................................TGATTGTCCAAACGCAATTCTCGT......................................................................................................... 24 1 2 2.50 5 5
.....................................................................................TTCTTGTACGAGTCTGCGGCCAACCGAGAAT................................................................................. 31 0 1 2.00 2 2
....................................................................TGATTGTCCAAACGCAATTC............................................................................................................. 20 0 2 0.50 1 1

Anti-sense strand reads

CCGCGAAAATTCCTCGTTTCGCCTTGGGGCGGCCTGTGGGCCCTGGGACTTGAGTCCCCGAAGCGGTGACTAACAGGTTTGCGTTAAGAACATGCTCAGACGCCGGTTGGCTCTTAACACCGACCTGTAGACACCGACTCGAGGCCCGCGTTGTCCCCGCCCTCGGCGTCCCTGTCTCGAGTCGCGCCCACTCTGGG

***********************************..((((...(((((..(((.(((((((.(((((.(((.(((((..(((((((((((.....(((...)))....)))))))))))..)))))))).))))).)))))))))).....))))).))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
............................................................................................................TGCTCTTAACACCGACCTGTAGA.................................................................. 23 1 1 1.00 1 1

Generated: 09/01/2015 at 11:56 AM