ID:eca-mir-219-1 |
Coordinate:chr20:33649525-33649611 + |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -50.4 |
 |
|
GTGGTGTCTCCATTCCCCCGTTCCTCCCGTGCGCCTCCCTCCCCCGCCCCGGGCCGCGGCTCTTGATTGTCCAAACGCAATTCTCGAGTCTCTGGCTCCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGGGGAGTGCGGGTCGGAGGGTCTAGGGAGAGCTAAAGCG
************************************************..((((.(((((((..(((.(((((.((.(((((((((.(((.........)))))))))))).)).))))))))..))))))).)))).....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR871532 testes |
|---|---|---|---|---|---|---|
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAAA.......................................................... | 25 | 2 | 1 | 11.00 | 11 | 11 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGA............................................................ | 23 | 0 | 1 | 8.00 | 8 | 8 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCG............................................................. | 22 | 0 | 1 | 6.00 | 6 | 6 |
| ...............................................................TGATTGTCCAAACGCAATTCTC...................................................................................................... | 22 | 0 | 1 | 3.00 | 3 | 3 |
| ...............................................................TGATTGTCCAAACGTAATTCTC...................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAT........................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 |
| ...............................................................TGATTGTCCAAACGCAATTCTCG..................................................................................................... | 23 | 0 | 1 | 3.00 | 3 | 3 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAG........................................................... | 24 | 0 | 1 | 3.00 | 3 | 3 |
| ...............................................................TGATTGTCCAAACGCAATTCTCGT.................................................................................................... | 24 | 1 | 2 | 2.50 | 5 | 5 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAA........................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGT............................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAGT.......................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGATT.......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAAAA......................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................CGAGATGAGTCTGGACGTCCCGA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGGA........................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGTTA.......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGTAA.......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAGA.......................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGGCGTCCCG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 |
| ..................................................................TTGTCCAAACGCAATTCTCG..................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 |
| ...........................................CCGCCCCGGGCCGCGGCTC............................................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 |
| ........................................................................................................AGAGTTGAGTCTGGACGTCCCGAAG.......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 |
| .....................................................................................................CCGAGAGTTGAGTCTGGACGCTT............................................................... | 23 | 3 | 2 | 0.50 | 1 | 1 |
| ...............................................................TGATTGTCCAAACGCAATTC........................................................................................................ | 20 | 0 | 2 | 0.50 | 1 | 1 |
|
CACCACAGAGGTAAGGGGGCAAGGAGGGCACGCGGAGGGAGGGGGCGGGGCCCGGCGCCGAGAACTAACAGGTTTGCGTTAAGAGCTCAGAGACCGAGGCCGGCTCTCAACTCAGACCTGCAGGGCTCGGCGGCGGGGGTTTGGAGCTCCCCTCACGCCCAGCCTCCCAGATCCCTCTCGATTTCGC
*********************************************..((((.(((((((..(((.(((((.((.(((((((((.(((.........)))))))))))).)).))))))))..))))))).)))).....************************************************ |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR871532 testes |
|---|---|---|---|---|---|---|
| .................................................................TAACAGGTTTGCGTTAAGAGCT.................................................................................................... | 22 | 0 | 1 | 3.00 | 3 | 3 |
| ........................................................GCCGAGAACTAACAGGTTTGCGTTAAGA....................................................................................................... | 28 | 0 | 1 | 2.00 | 2 | 2 |
| ..................................................CCCGGCGCCGAGAACTAACGGGGTTGCGT............................................................................................................ | 29 | 2 | 1 | 1.00 | 1 | 1 |
| ................................................................................AAGAGCTCAGAGACCGAGGCCGGCTCT................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 1 |
| .....................................................................................................GGCTCTCAACTCAGACCTGCA................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 |
| ...................................................................TCAGGTTTGCGTTAAGAGCT.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 |
| ......................................................GCGCCGAGAACTAACAGGTTTGCGTTAAG........................................................................................................ | 29 | 0 | 1 | 1.00 | 1 | 1 |
| ................................................................TTAACAGGTTTGCGTTAAGAGC..................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 |
Generated: 09/01/2015 at 11:49 AM