ID:

eca-mir-215

 Coordinate:

chr30:10337621-10337730 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.0 -38.4 -38.3 -38.2

Sense Strand Reads

CCAAATATTATGTCACATAAAGGACCCAACAATGGAAGAGGATTAGAGTCATCATTAAGAAATGGTATACAGGAAAATGACCTATGAATTGACAGACAATATGACTAAGTTTGTCTGTCATTTCTGTAGGCCAATATTCTGTATATCTCTGCTACTTCAACACCAGAAATCAACAAATACATGCAAGCAACACAATGGCAGATGCACAGA

***********************************............((........(((...(((((((((((...((.((((((((.((((((((((...........)))))))))).))).))))).))...))))))))))))))......................)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
............................................................................ATGACCTATGAATTGACAGACA................................................................................................................ 22 0 1 16.00 16 16
............................................................................ATGACCTATGAATTGACAGAC................................................................................................................. 21 0 1 11.00 11 11
............................................................................ATGACCTATGAATTGACAGACT................................................................................................................ 22 1 1 4.00 4 4
............................................................................ATGACCTATGAATTGACAGA.................................................................................................................. 20 0 1 2.00 2 2
............................................................................CTGACCTATGAATTGACAGAC................................................................................................................. 21 1 2 2.00 4 4
............................................................................ATGACCTATGAGTTGACAGAC................................................................................................................. 21 1 1 1.00 1 1
............................................................................ATGACCTATGACTTGACAGACA................................................................................................................ 22 1 1 1.00 1 1
............................................................................ATGACCTATGAATTGACAGACAA............................................................................................................... 23 0 1 1.00 1 1
............................................................................ATGACCTATGAATTGACAGACATT.............................................................................................................. 24 1 1 1.00 1 1
............................................................................CTGACCTATGAATTGACAGCCAAAA............................................................................................................. 25 3 3 1.00 3 3
.............................................................................TGACCTATGAATTGACAGCCAA............................................................................................................... 22 1 2 0.50 1 1
............................................................................CTGACCTATGAATTGACAGCCAAGA............................................................................................................. 25 3 2 0.50 1 1
............................................................................CTGACCTATGAATTGACAGACA................................................................................................................ 22 1 2 0.50 1 1
............................................................................CTGACCTATGAATTGACAGA.................................................................................................................. 20 1 3 0.33 1 1
............................................................................CTGACCTATAAATTGACAGAC................................................................................................................. 21 2 4 0.25 1 1

Anti-sense strand reads

GGTTTATAATACAGTGTATTTCCTGGGTTGTTACCTTCTCCTAATCTCAGTAGTAATTCTTTACCATATGTCCTTTTACTGGATACTTAACTGTCTGTTATACTGATTCAAACAGACAGTAAAGACATCCGGTTATAAGACATATAGAGACGATGAAGTTGTGGTCTTTAGTTGTTTATGTACGTTCGTTGTGTTACCGTCTACGTGTCT

***********************************............((........(((...(((((((((((...((.((((((((.((((((((((...........)))))))))).))).))))).))...))))))))))))))......................)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:00 PM