ID:

eca-mir-212

 Coordinate:

chr11:45640251-45640310 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.0

Sense Strand Reads

CCCCCAGCTGCGGGCGACAGTGGCACTCCCGCCCGGGCAGCGCGCCGGCACCTTGGCTCTAGACTGCTTACTGCCCGGGCCGCCCTCAGTAACAGTCTCCAGTCACGGCCACCGACGCCTGGCCCCGCCCCAGGACCGCAGACCCGGCCACCTGCCGCAC

***********************************(((((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).))))).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.........................................................................................TAACAGTCTCCAGTCACGGCC.................................................. 21 0 1 10.00 10 10
.................................................ACCTTGGCTCTAGACTGCTTACT........................................................................................ 23 0 1 7.00 7 7
..................................................CCTTGGCTCTAGACTGCTTACT........................................................................................ 22 0 1 3.00 3 3
.........................................................................................TAACAGTCTCCAGTCACGGCCA................................................. 22 0 1 2.00 2 2
.................................................ACCTTGGCTCTAGACTGCTTACTG....................................................................................... 24 0 1 1.00 1 1
..................................................CCTTGGCTCTAGACTGCTTACTGG...................................................................................... 24 1 1 1.00 1 1
.........................................................................................TAACAGTCTCCAGTCACGGCCAGT............................................... 24 2 1 1.00 1 1

Anti-sense strand reads

GGGGGTCGACGCCCGCTGTCACCGTGAGGGCGGGCCCGTCGCGCGGCCGTGGAACCGAGATCTGACGAATGACGGGCCCGGCGGGAGTCATTGTCAGAGGTCAGTGCCGGTGGCTGCGGACCGGGGCGGGGTCCTGGCGTCTGGGCCGGTGGACGGCGTG

***********************************(((((.(((.(((..((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...))).))))).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
................................................................ACGAATGACGGGCCCGGCGGGAGTCATTGTCAGAGGT........................................................... 37 0 1 1.00 1 1

Generated: 09/01/2015 at 11:36 AM