ID:

eca-mir-2114

 Coordinate:

chrX:119236745-119236873 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.6 -44.7 -44.7

Sense Strand Reads

CAGTCGGCAGGTCCTCATGCAGTCCGCAAGGGGCTGAGCATCCCAGCCCCTGGGCTCAGGGACAGGCCATGGCCTCCATGCTCCTAGTCCCTTCCTTGAAGGGTCGGATAAGTCACATGACGAGCCTCAAGCAAGGGACTTTGAGCTGGTGGCTCCCAGCAGCCTCCTGTTCCTGAACCATCATCGTCTCCTCCCGAAGTCCTCCCATCCTCTGCCCCTGCCTGTGCCA

*********************************************************************.((((.(((.((((..((((((((.(((((.((.(((..............))).))))))).))))))))..))))))).)))).....********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................................................AGCCTCAAGCAAGGGACTTTGT..................................................................................... 22 1 1 4.00 4 4
..........................................................................................................................AGCCTCAAGCAAGGGACTTTGTA.................................................................................... 23 2 1 4.00 4 4
....................................................................................TAGTCCCTTCCTTGAAGGGTCGGAGT....................................................................................................................... 26 2 1 3.00 3 3
....................................................................................TAGTCCCTTCCTTGAAGGGTCGGAT........................................................................................................................ 25 0 1 3.00 3 3
....................................................................................TAGTCCCTTCCTTGAAGGGTCGGATAAGT.................................................................................................................... 29 0 1 3.00 3 3
....................................................................................TAGTCCCTTCCTTGAAGGGTCGTAGA....................................................................................................................... 26 2 1 2.00 2 2
....................................................................................TAGTCCCTTCCTTGAAGGGTCGGATT....................................................................................................................... 26 1 1 2.00 2 2
..........................................................................................................................AGCCTCAAGCAAGGGACTTTGTT.................................................................................... 23 2 1 2.00 2 2
..........................................................................................................................AGCCTCAAGCAAGGGACTTTGA..................................................................................... 22 0 1 2.00 2 2
..........................................................................................................GATAAGTCACATGACG........................................................................................................... 16 0 1 1.00 1 1
....................................................................................TAGTCCCTTCCTTGAAGGGTCGGAAGACT.................................................................................................................... 29 3 1 1.00 1 1
....................................................................................TAGTCCCTTCCTTGAAGGGTCGT.......................................................................................................................... 23 1 1 1.00 1 1
....................................................................................TAGTCCCTTCCTTGAAGGGTCG........................................................................................................................... 22 0 1 1.00 1 1
....................................................................................TAGTCCCTTCCTTGAAGGGTCGGA......................................................................................................................... 24 0 1 1.00 1 1
....................................................................................TAGTCCCTTCCTTGAAGGGTCGAAC........................................................................................................................ 25 2 1 1.00 1 1
..........................................................................................................................AGCCTCAAGCAAGGGACTTTGC..................................................................................... 22 1 1 1.00 1 1
..........................................................................................................................AGCCTCAAGCAAGGGACTT........................................................................................ 19 0 1 1.00 1 1
..........................................................................................................................AGCCTCAAGCAAGGGACTTTGTAA................................................................................... 24 3 2 0.50 1 1

Anti-sense strand reads

GTCAGCCGTCCAGGAGTACGTCAGGCGTTCCCCGACTCGTAGGGTCGGGGACCCGAGTCCCTGTCCGGTACCGGAGGTACGAGGATCAGGGAAGGAACTTCCCAGCCTATTCAGTGTACTGCTCGGAGTTCGTTCCCTGAAACTCGACCACCGAGGGTCGTCGGAGGACAAGGACTTGGTAGTAGCAGAGGAGGGCTTCAGGAGGGTAGGAGACGGGGACGGACACGGT

**********************************************************************.((((.(((.((((..((((((((.(((((.((.(((..............))).))))))).))))))))..))))))).)))).....********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:18 PM