ID:

eca-mir-19a

 Coordinate:

chr17:61792692-61792773 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.4 -37.3 -37.2

Sense Strand Reads

CAATAATCCAAGCCAAGCAAGTATATAGGTGTTTTGATAACTTTTTGTTTGCAGTCTTCTGTTAGTTTTGCATAGTTGCACTACAAGAAGAATGTAGTTGTGCAAATCTATGCAAAACTGATGGTGGCCTGCTATTTCCTTCAAGTGATTTTTACTAATTTTGTGTACTTTTATTGTGTCGA

***********************************...............((((.((.(((((((((((((((((((((((((((.......))))...))))))..))))))))))))))))).)).))))...............*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..................................................................................................TGTGCAAATCTATGCAAAACTG.............................................................. 22 0 1 51.00 51 51
..................................................................................................TGTGCAAATCTATGCAAAACTGA............................................................. 23 0 1 42.00 42 42
..................................................................................................TGTGCAAATCTATGCAAAACTGT............................................................. 23 1 1 21.00 21 21
.................................................................................................TTGTGCAAATCTATGCAAAACTG.............................................................. 23 0 1 7.00 7 7
.................................................................................................TTGTGCAAATCTATGCAAAACTGA............................................................. 24 0 1 6.00 6 6
..................................................................................................TGTGCAAATCTATGCAAAACT............................................................... 21 0 1 4.00 4 4
.................................................................................................TTGTGCAAATCTATGCAAAACTGT............................................................. 24 1 1 2.00 2 2
..................................................................................................TGTGCAAATCTATGCAAAAC................................................................ 20 0 1 2.00 2 2
..................................................................................................TGTGCAAATCTATGCAGAACTG.............................................................. 22 1 1 1.00 1 1
..................................................................................................TGTGCACATCTATGCAAAACTG.............................................................. 22 1 1 1.00 1 1
..................................................................................................TGTGCAAATCTATGCAAAACTGC............................................................. 23 1 1 1.00 1 1
..................................................................................................TGTGCAAATCTATGCAAAACTGAT............................................................ 24 0 1 1.00 1 1
..................................................................................................TGTGCAAATCTATGCGAAACTG.............................................................. 22 1 1 1.00 1 1
..................................................................................................TGTGCAAATCTATGCAGAACTGT............................................................. 23 2 1 1.00 1 1
..................................................................................................TGTGTAAATCTATGCAAAACTGA............................................................. 23 1 1 1.00 1 1
..................................................................................................TGTGCAAATCTATGCAAAACTTA............................................................. 23 1 1 1.00 1 1
.................................................................................................TTGTGCAAAACTATGCAAAACT............................................................... 22 1 2 0.50 1 1
..................................................................................................TGTGCAAATCTATGCAAAAGTGT............................................................. 23 2 2 0.50 1 1
..................................................................................................TGTGCAAATCTATGCAAAACTGTA............................................................ 24 2 2 0.50 1 1
..................................................................................................TGTGCAAATCAATGCAAAACTGA............................................................. 23 1 3 0.33 1 1
..................................................................................................TGTGCAAATCGATGCAAAACTGT............................................................. 23 2 4 0.25 1 1
.................................................................................................TTGTGCAAATCTGTGCAGAACT............................................................... 22 2 4 0.25 1 1
..................................................................................................TGTGCAAATCTATGGACAACTGT............................................................. 23 3 6 0.17 1 1

Anti-sense strand reads

GTTATTAGGTTCGGTTCGTTCATATATCCACAAAACTATTGAAAAACAAACGTCAGAAGACAATCAAAACGTATCAACGTGATGTTCTTCTTACATCAACACGTTTAGATACGTTTTGACTACCACCGGACGATAAAGGAAGTTCACTAAAAATGATTAAAACACATGAAAATAACACAGCT

***********************************...............((((.((.(((((((((((((((((((((((((((.......))))...))))))..))))))))))))))))).)).))))...............*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:45 AM