ID:

eca-mir-199b

 Coordinate:

chr25:31553692-31553760 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.3 -36.3 -36.3
mature

  1. eca-mir-199a  chr5:8104741-8104761 -
  2. chr7:49327271-49327291 +
  3. eca-mir-199b  chr25:31553696-31553716 -
star

Sense Strand Reads

CCGATGGACAGACACTGCTGCCTGGATGGACCAGAGGACACCTCCACTCCGTCTACCCAGTGTTTAGACTATCTGTTCAGGACTCCCAAATTGTACAGTAGTCTGCACATTGGTTAGGCTGGGCTGGGTTAGACCCTCGGCGCCGCCGCTGGAGAGCTGGACCGACCCC

****************************************..(((((((.(((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).))))).))).))))..*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..............................................................................................ACAGTAGTCTGCACATTGGTT...................................................... 21 0 3 7864.00 23592 23592
.............................................................................................TACAGTAGTCTGCACATTGGTT...................................................... 22 0 3 1947.00 5841 5841
..............................................................................................ACAGTAGTCTGCACATTGGT....................................................... 20 0 3 1793.67 5381 5381
.......................................................CCCAGTGTTTAGACTATCTGTTC........................................................................................... 23 0 1 1678.00 1678 1678
..............................................................................................ACAGTAGTCTGCACATTGGTTA..................................................... 22 0 3 1524.67 4574 4574
.............................................................................................TACAGTAGTCTGCACATTGGT....................................................... 21 0 3 758.00 2274 2274
...............................................................................................CAGTAGTCTGCACATTGGTT...................................................... 20 0 3 747.00 2241 2241
..............................................................................................ACAGTAGTCTGCACATTGGTA...................................................... 21 1 3 555.33 1666 1666
..............................................................................................CCAGTAGTCTGCACATTGGTT...................................................... 21 1 3 492.00 1476 1476
..............................................................................................ACAGTAGTCTGCACATTGGTTAA.................................................... 23 1 3 455.67 1367 1367
.......................................................CCCAGTGTTTAGACTATCTGTT............................................................................................ 22 0 1 353.00 353 353
.............................................................................................TACAGTAGTCTGCACATTGGTA...................................................... 22 1 3 302.00 906 906
.......................................................CCCAGTGTTTAGACTATCTGT............................................................................................. 21 0 1 265.00 265 265
..............................................................................................ACAGTAGTCTGCACATTGGTTAT.................................................... 23 1 3 259.33 778 778
...............................................................................................CAGTAGTCTGCACATTGGTTA..................................................... 21 0 3 224.00 672 672
.......................................................CCCAGTGTTTAGACTATCTGTTCT.......................................................................................... 24 1 1 212.00 212 212
...............................................................................................CAGTAGTCTGCACATTGGT....................................................... 19 0 3 180.00 540 540
..............................................................................................ACAGTAGTCTGCACATTGGTTT..................................................... 22 1 3 142.67 428 428
...............................................................................................CAGTAGTCTGCACATTGGTTAA.................................................... 22 1 3 141.00 423 423
..............................................................................................ACAGTAGTCTGCACATTGG........................................................ 19 0 3 137.67 413 413
.......................................................CCCAGTGTTTAGACTATCTG.............................................................................................. 20 0 1 107.00 107 107
..............................................................................................CCAGTAGTCTGCACATTGGTTA..................................................... 22 1 3 106.67 320 320
..............................................................................................ACAGTAGTCTGCACATTGGTAA..................................................... 22 1 3 88.67 266 266
...............................................................................................CAGTAGTCTGCACATTGGTTAT.................................................... 22 1 3 88.00 264 264
.............................................................................................TACAGTAGTCTGCACATTGGTTA..................................................... 23 0 3 84.00 252 252
.......................................................CCCAGTGTTTAGACTATCTGTTA........................................................................................... 23 1 1 80.00 80 80
..............................................................................................CCAGTAGTCTGCACATTGGT....................................................... 20 1 4 77.50 310 310
..............................................................................................ACAGTAGTCTGCACAT........................................................... 16 0 3 61.67 185 185
..............................................................................................ACAGTAGTCTGCACATTGGGT...................................................... 21 1 3 58.67 176 176
.......................................................CCCAGTGTTTAGACTATCTGTTCA.......................................................................................... 24 0 1 58.00 58 58
.......................................................CCCAGTGTTTAGACTATCTGTTT........................................................................................... 23 1 1 56.00 56 56
.............................................................................................TACAGTAGTCTGCACATTGG........................................................ 20 0 3 56.00 168 168
.............................................................................................TACAGTAGTCTGCACATTGGTTT..................................................... 23 1 3 53.00 159 159
..............................................................................................ACAGTAGTCTGCACATTGGTTG..................................................... 22 1 3 47.00 141 141
..............................................................................................ACAGTAGTCTGCACATTGGTTATT................................................... 24 2 3 44.67 134 134
..............................................................................................ACAGTAGTCTGGACATTGGTT...................................................... 21 1 3 43.33 130 130
...............................................................................................CAGTAGTCTGCACATTGGTA...................................................... 20 1 4 37.25 149 149
..............................................................................................ACAGTAGTCTGCACATTGGAT...................................................... 21 1 3 34.67 104 104
..............................................................................................ACAGTAGTCTGCGCATTGGTT...................................................... 21 1 3 33.67 101 101
...............................................................................................CAGTAGTCTGCACATTGGTTATT................................................... 23 2 3 30.67 92 92
..............................................................................................ACAGTAGTCTGCACATGGGTT...................................................... 21 1 3 27.00 81 81
..............................................................................................CCAGTAGTCTGCACATTGGTTAA.................................................... 23 2 5 21.40 107 107
.......................................................CCCAGTGTTTAGACTATC................................................................................................ 18 0 1 20.00 20 20
..............................................................................................ACAGTAGTCTGCACATTGGA....................................................... 20 1 3 18.33 55 55
..............................................................................................ACAGTAGTCTGCACATTGGCT...................................................... 21 1 3 18.00 54 54
...............................................................................................CAGTAGTCTGCACATTGGTTT..................................................... 21 1 3 17.67 53 53
..............................................................................................ACAGTAGTCGGCACATTGGTT...................................................... 21 1 3 16.67 50 50
.............................................................................................TACAGTAGTCTGCACATTGGTG...................................................... 22 1 3 16.33 49 49
..............................................................................................ACAGTAGTCTGCACGTTGGTT...................................................... 21 1 3 15.33 46 46
..............................................................................................ACAGTAGTCGGCACATTGGGT...................................................... 21 2 3 14.67 44 44
.............................................................................................TACAGTAGTCTGCACAT........................................................... 17 0 3 14.33 43 43
..............................................................................................ACAGTAGTCTGCACATTGGG....................................................... 20 1 3 14.33 43 43
..............................................................................................ACAGTAGTCTGAACATTGGTT...................................................... 21 1 3 14.00 42 42
..............................................................................................CCAGTAGTCTGCACATTGGTTAT.................................................... 23 2 3 13.33 40 40
.............................................................................................TACAGTAGTCTGCACATTGGTTAT.................................................... 24 1 3 11.00 33 33
.......................................................CCCAGTGTTTAGACTATCTGTA............................................................................................ 22 1 1 11.00 11 11
..............................................................................................ACAGTAGTCTGCACATTGGTTAG.................................................... 23 0 3 10.67 32 32
..............................................................................................ACAGTAGTCTGCACATTGGGTA..................................................... 22 1 3 10.33 31 31
..............................................................................................ACAGTAGTCTGCACATTGGTTGA.................................................... 23 2 3 10.00 30 30
.............................................................................................TACAGTAGTCTGCACATTGGTAA..................................................... 23 1 3 10.00 30 30
...............................................................................................CAGTAGTCTGCACATTGG........................................................ 18 0 3 10.00 30 30
.......................................................CCCAGTGTTTAGACTATCTGTGC........................................................................................... 23 1 1 10.00 10 10
..............................................................................................ACAGTAGTCTGCACATTGGTTC..................................................... 22 1 3 9.67 29 29
..............................................................................................ACAGTAGTCTGCACATTGGTAT..................................................... 22 2 4 9.50 38 38
..............................................................................................ACAGTAGTCTGCACATTGGATA..................................................... 22 1 3 9.00 27 27
.............................................................................................TACAGTAGTCTGCACATTGGTC...................................................... 22 1 3 9.00 27 27
..............................................................................................ACAGTAGTCTGGACATTGGT....................................................... 20 1 3 8.33 25 25
..............................................................................................ACAGTAGTCTGCACATTGGTAC..................................................... 22 2 3 8.33 25 25
.............................................................................................CACAGTAGTCTGCACATTGGTT...................................................... 22 1 3 8.33 25 25
.............................................................................................TACAGTAGTCTGCACATTGATT...................................................... 22 1 3 8.33 25 25
.......................................................CCCAGTGTTTAGACTATCTATTC........................................................................................... 23 1 1 8.00 8 8
.......................................................CCCAGTGTTTAGACTATCTGTTCC.......................................................................................... 24 1 1 8.00 8 8
.......................................................CCCAGTGTTTAGACTATCTGA............................................................................................. 21 1 1 8.00 8 8
.......................................................CCCAGTGTTTAGACTATCT............................................................................................... 19 0 1 8.00 8 8
..............................................................................................ACAGTAGTCTGCACATAGGTT...................................................... 21 1 3 8.00 24 24
.............................................................................................TACAGTAGTCTGCACATTGGTTG..................................................... 23 1 3 8.00 24 24
..............................................................................................ACAGTAGTCTGCACATCGGTT...................................................... 21 1 3 7.67 23 23
.............................................................................................TACAGTAGTCTGGACATTGGTT...................................................... 22 1 3 7.67 23 23
..............................................................................................ACAGTAGTCTGCACATTGGTAAA.................................................... 23 2 4 7.50 30 30
.............................................................................................TACAGTAGTCTGCACATTGGTAT..................................................... 23 2 3 7.33 22 22
..............................................................................................ACAGTAGTCTGGACATTGGTTA..................................................... 22 1 3 7.00 21 21
.......................................................CCCAGTGTTGAGACTATCTGTTC........................................................................................... 23 1 1 7.00 7 7
.......................................................CCCAGTGTTTAGGCTATCTGTTC........................................................................................... 23 1 1 7.00 7 7
..............................................................................................ACAGTAGTCTGCACATTGGTTTT.................................................... 23 2 3 7.00 21 21
..............................................................................................ACAGTAGTCTGCGCATTGGT....................................................... 20 1 3 6.67 20 20
...............................................................................................CAGTAGTCTGCACATTGGTAA..................................................... 21 1 4 6.50 26 26
.............................................................................................TACAGTAGTCTGCACATTGGA....................................................... 21 1 3 6.33 19 19
..............................................................................................ACAGTAGTCTGCACATTGGTG...................................................... 21 1 3 6.33 19 19
..............................................................................................ACAGTAGTCTGCACGTGGGTT...................................................... 21 2 4 6.25 25 25
.......................................................CCCAGTGTTTGGACTATCTGTTC........................................................................................... 23 1 1 6.00 6 6
..............................................................................................ACAGTAGTCTGCACATGGGTTA..................................................... 22 1 3 6.00 18 18
..............................................................................................CCAGTAGTCTGCACATTGGTTT..................................................... 22 2 4 6.00 24 24
...............................................................................................CAGTAGTCTGCACATTGGTG...................................................... 20 1 3 5.67 17 17
..............................................................................................ACAGTAGTCTGCACATTGGCTA..................................................... 22 1 3 5.33 16 16
..............................................................................................ACAGTAGTCAGCACATTGGTT...................................................... 21 1 3 5.33 16 16
.......................................................CCCAGTGTTTAGACTATCTGTTCG.......................................................................................... 24 1 1 5.00 5 5
..............................................................................................ACAGTAGTCGGCACATTGGAT...................................................... 21 2 6 5.00 30 30
.............................................................................................TACAGTAGTCTGCACAGTGGTT...................................................... 22 1 3 5.00 15 15
.............................................................................................TACAGTAGTCTGCACATTGGTTGT.................................................... 24 2 3 5.00 15 15
..............................................................................................ACAGTAGTCTGCACATTGGTTGT.................................................... 23 2 3 5.00 15 15
..............................................................................................CCAGTAGTCTGCACATTGG........................................................ 19 1 4 5.00 20 20
..............................................................................................ACAGTAGTCTGCACATTGT........................................................ 19 1 4 4.75 19 19
...............................................................................................CAGTAGTCTGCACAT........................................................... 15 0 4 4.75 19 19
.............................................................................................TACAGTAGTGTGCACATTGGTT...................................................... 22 1 3 4.67 14 14
..............................................................................................ACAGTAGTCTGCACATTGGC....................................................... 20 1 3 4.67 14 14
..............................................................................................ACAGTAGTCTGTACATTGGTT...................................................... 21 1 3 4.67 14 14
..............................................................................................TCAGTAGTCTGCACATTGGTT...................................................... 21 1 3 4.67 14 14
.............................................................................................TACAGTAGTCTGAACATTGGTT...................................................... 22 1 3 4.67 14 14
.............................................................................................TACAGTAGTCTGCACATTGGTTAA.................................................... 24 1 3 4.67 14 14
..............................................................................................ACAGTAGTCTGCACATTGGTTAC.................................................... 23 1 3 4.33 13 13
..............................................................................................ACAGTAGTCTGCACATTGGAAA..................................................... 22 2 3 4.33 13 13
..............................................................................................ACAGTAGTCTGCACGTTGGTTA..................................................... 22 1 3 4.33 13 13
..............................................................................................ACAGTAGTCAGCACATTGGAT...................................................... 21 2 5 4.20 21 21
..........................................................AGTGTTTAGACTATCTGTTC........................................................................................... 20 0 1 4.00 4 4
..............................................................................................ACAGTAGTCTGCACATGGGT....................................................... 20 1 4 4.00 16 16
..............................................................................................GCAGTAGTCTGCACATTGGTT...................................................... 21 1 3 4.00 12 12
..............................................................................................ACAGTAGTCTGAACATTGGTTA..................................................... 22 1 3 4.00 12 12
.......................................................CCCAGTGTTTAGACTAGCTGTTC........................................................................................... 23 1 1 4.00 4 4
.............................................................................................TACAGTAGTCTGAACATTGGT....................................................... 21 1 3 4.00 12 12
.......................................................CCCAGTGTTTAGACTATCTGAA............................................................................................ 22 2 1 4.00 4 4
...............................................................................................CAGTAGTCTGCACATTGGTTAC.................................................... 22 1 3 4.00 12 12
.......................................................CCCAGTGTTTAGACTAACTGTTC........................................................................................... 23 1 1 4.00 4 4
.............................................................................................TACAGTAGTCTGCACATTGAT....................................................... 21 1 3 4.00 12 12
..............................................................................................ACAGTAGTCTGCGCATTGGTTA..................................................... 22 1 3 4.00 12 12
..............................................................................................ACAGTAGTCAGCACATTGGGT...................................................... 21 2 4 3.75 15 15
.............................................................................................TACAGTAGTCTGCAGATTGGTT...................................................... 22 1 3 3.67 11 11
..............................................................................................ACAGTAGTCTGCCCATTGGTT...................................................... 21 1 3 3.67 11 11
..............................................................................................CCAGTAGTCTGCACATTGGTTG..................................................... 22 2 3 3.67 11 11
.............................................................................................TACAGTAGTCTGCACAGTGGT....................................................... 21 1 3 3.67 11 11
..............................................................................................ACAGTAGTCTGCACGTTGGT....................................................... 20 1 3 3.33 10 10
.............................................................................................TACAGTAGTCTGCACATTGCTT...................................................... 22 1 3 3.33 10 10
..............................................................................................ACAGTAGTCTGGACATTGGTTAA.................................................... 23 2 3 3.33 10 10
..............................................................................................AGAGTAGTCTGCACATTGGTT...................................................... 21 1 3 3.33 10 10
.............................................................................................TACAGTGGTGTGCACATTGGTT...................................................... 22 2 3 3.33 10 10
..............................................................................................ACAGTAGTCTACACATTGGTT...................................................... 21 1 3 3.33 10 10
..............................................................................................ACAGTAGTCTGCACATTGGTTAAT................................................... 24 2 3 3.33 10 10
...............................................................................................CAGTAGTCTGCAGATTGGTT...................................................... 20 1 3 3.33 10 10
..............................................................................................ACAGTAGTCTGCACATTGGGTAA.................................................... 23 2 3 3.33 10 10
..............................................................................................ACAGTAGTCGGCACATTGGCT...................................................... 21 2 3 3.33 10 10
.......................................................CCCAGTGTTTAGACT................................................................................................... 15 0 4 3.25 13 13
..............................................................................................CCAGTAGTCTGCGCATTGGTT...................................................... 21 2 4 3.25 13 13
.......................................................CCCAGTGTTTAGACTATCTGTCC........................................................................................... 23 1 1 3.00 3 3
.......................................................CCCAGTGTTTAGACTATCTGTTCAGGA....................................................................................... 27 0 1 3.00 3 3
.......................................................CCCAGTGTTTAGACTATCTTTTC........................................................................................... 23 1 1 3.00 3 3
..............................................................................................ACAGTAATCTGCACATTGGTT...................................................... 21 1 3 3.00 9 9
...............................................................................................CAGTAGTCTGCAAATTGGTT...................................................... 20 1 3 3.00 9 9
.......................................................CCCAGTGTTTAGGCTATCTGTT............................................................................................ 22 1 1 3.00 3 3
.............................................................................................TACAGTAGTCTGCACATTGGTAC..................................................... 23 2 3 3.00 9 9
.......................................................TCCAGTGTTTAGACTATCTGTTC........................................................................................... 23 1 1 3.00 3 3
................................................................................................AGTAGTCTGCACATTGGTT...................................................... 19 0 3 3.00 9 9
.......................................................CCCAGTGTTTAGACTATCTGTAA........................................................................................... 23 2 1 3.00 3 3
.......................................................CCCAGTGTTTAGACTATCTGTTG........................................................................................... 23 1 1 3.00 3 3
.............................................................................................TACAGTAGTCTGCACATTGT........................................................ 20 1 4 3.00 12 12
.............................................................................................TACAGTAGTCTGCACATTGGTGA..................................................... 23 1 3 3.00 9 9
.......................................................CCCAGTGTTTAGACTATCTGTAC........................................................................................... 23 1 1 3.00 3 3
........................................................CCAGTGTTTAGACTATCTGTTC........................................................................................... 22 0 1 3.00 3 3
..............................................................................................ACAGTAGTCTGCACATTGGTGA..................................................... 22 1 3 3.00 9 9
...............................................................................................CAGTAGTCTGCACATTGGTTAG.................................................... 22 0 3 3.00 9 9
..............................................................................................ACAGTACTCTGCACATTGGTT...................................................... 21 1 3 2.67 8 8
..............................................................................................ACAGTAGTCGGCACATTGGTTA..................................................... 22 1 3 2.67 8 8
..............................................................................................ACAGTAGTCGGCACATTGGT....................................................... 20 1 3 2.67 8 8
.............................................................................................TACAGTAGTCTGGACATTGGT....................................................... 21 1 3 2.67 8 8
...............................................................................................CAGTAGTCTGCACATTGGTGA..................................................... 21 1 3 2.67 8 8
..............................................................................................ACAGTAGTCTGCACATTGGTTTA.................................................... 23 2 3 2.67 8 8
...............................................................................................CAGTAGTCTGCACATTGGTTAGT................................................... 23 1 3 2.67 8 8
..............................................................................................ACAGTAGTCTGAACATTGGT....................................................... 20 1 3 2.67 8 8
.............................................................................................TACAGTAGTCTGCACATTGGAA...................................................... 22 2 3 2.67 8 8
..............................................................................................ACAGTAGTCTGCACATTGGAA...................................................... 21 2 7 2.43 17 17
..............................................................................................ACAGTAGTCTGGACATTGGTA...................................................... 21 2 5 2.40 12 12
..............................................................................................CCAGTAGTCTGCACGTTGGTT...................................................... 21 2 5 2.40 12 12
..............................................................................................ACAGTAGTCTGCACATTGGTC...................................................... 21 1 3 2.33 7 7
..............................................................................................ATAGTAGTCTGCACATTGGTT...................................................... 21 1 3 2.33 7 7
.............................................................................................TACAGTAGTCTGCACAATGGTT...................................................... 22 1 3 2.33 7 7
..............................................................................................ACAGTAGTCTGCACATTGGGTAT.................................................... 23 2 3 2.33 7 7
...............................................................................................CAGTAGTCTGCGCATTGGTT...................................................... 20 1 3 2.33 7 7
..............................................................................................ACAGTAGTCTGCGCATTGGTA...................................................... 21 2 3 2.33 7 7
.............................................................................................TACAGTAGTCTGCACATTGGTTATT................................................... 25 2 3 2.33 7 7
.............................................................................................TACAGTAGTCGGCACATTGGTT...................................................... 22 1 3 2.33 7 7
..............................................................................................ACAGTAGTCTGCACATTGGCTAA.................................................... 23 2 3 2.00 6 6
.......................................................CCCAGTGTTTAGACTATCTGTGCT.......................................................................................... 24 2 1 2.00 2 2
.......................................................CCCAGTGTTTAGACGATCTGT............................................................................................. 21 1 1 2.00 2 2
................................................................................................AGTAGTCTGCACATTGGTTAA.................................................... 21 1 3 2.00 6 6
.......................................................CCCAGTCTTTAGACTATCTGTTC........................................................................................... 23 1 1 2.00 2 2
..............................................................................................ACAGTAGTCTGCACATGGGTA...................................................... 21 2 7 2.00 14 14
..............................................................................................CCAGTAGTCTGGACATTGGTT...................................................... 21 2 3 2.00 6 6
..............................................................................................ACAGTAGTCTGCACATTG......................................................... 18 0 3 2.00 6 6
..............................................................................................ACAGTAGTCAGCACATTGGGTA..................................................... 22 2 3 2.00 6 6
................................................................................................AGTAGTCTGCACATTGGTTATT................................................... 22 2 3 2.00 6 6
.............................................................................................TACAGTAGTCTGCACATTGCT....................................................... 21 1 3 2.00 6 6
.............................................................................................TACAGTAGTCTGCACATTGGG....................................................... 21 1 3 2.00 6 6
.......................................................CCCAGTGTTTAGACTATCTGTGCA.......................................................................................... 24 1 1 2.00 2 2
.......................................................CCCAGTGTTTAAACTATCTGTTC........................................................................................... 23 1 1 2.00 2 2
..............................................................................................ACAGTAGTCTGCTCATTGGTT...................................................... 21 1 3 2.00 6 6
..............................................................................................ACAGTAGTCGGCACATTGGG....................................................... 20 2 5 2.00 10 10
.............................................................................................TACAGTAGTATGCACATTGATT...................................................... 22 2 4 2.00 8 8
.......................................................CCCAGTATTTAGACTATCTGT............................................................................................. 21 1 1 2.00 2 2
..............................................................................................ACAGTAGTCCGCACATTGGTT...................................................... 21 1 3 2.00 6 6
.......................................................CCCAGTGTTTAGACGATCTGTTT........................................................................................... 23 2 1 2.00 2 2
..............................................................................................ACAGTAGTCTGCACTTTGGTT...................................................... 21 1 3 2.00 6 6
.......................................................CCCAGTGTTGAGACTATCTATTC........................................................................................... 23 2 1 2.00 2 2
.......................................................CCCAGTGTTTAGACTATCTATT............................................................................................ 22 1 1 2.00 2 2
.......................................................CCCAGTGTTTAAACTATCTGTT............................................................................................ 22 1 1 2.00 2 2
.............................................................................................TACAGTAGTCTGCACATTGGTTGA.................................................... 24 2 3 2.00 6 6
.......................................................CCCAGTGTTTAGACGAGCTGTTC........................................................................................... 23 2 1 2.00 2 2
.......................................................CCCAGTGTTTAGACTATCTGG............................................................................................. 21 1 1 2.00 2 2
.......................................................CCTAGTGTTTAGACTATCTGTTC........................................................................................... 23 1 1 2.00 2 2
.......................................................CCCAGTGTTTAGACTATCTATTCT.......................................................................................... 24 2 1 2.00 2 2
..............................................................................................ACAGTAGTCAGCACATTGGCT...................................................... 21 2 4 2.00 8 8
.......................................................CCCAGTCTTGAGACTATCTGTTC........................................................................................... 23 2 1 2.00 2 2
.......................................................CCCAGTGTTTAGACTATCTGTTCAGGAC...................................................................................... 28 0 1 2.00 2 2
.......................................................CCCAGTGTTTAGACTATCTATTA........................................................................................... 23 2 1 2.00 2 2
...............................................................................................CAGTAGTCTGCAAATTGGTTA..................................................... 21 1 3 2.00 6 6
..............................................................................................ACAGTAGTCTGCACATTGGGTT..................................................... 22 2 3 2.00 6 6
.......................................................CCCAGTGTTGAGACTATCTGTT............................................................................................ 22 1 1 2.00 2 2
..............................................................................................ACAGTAGTCTGGACATTGG........................................................ 19 1 4 1.75 7 7
..............................................................................................ACAGTAATCGGCACATTGGTT...................................................... 21 2 4 1.75 7 7
..............................................................................................ACAGTAGTCTGCACATTGGTTAGT................................................... 24 1 3 1.67 5 5
..............................................................................................ACAGTAGTCTGCACATAGGT....................................................... 20 1 3 1.67 5 5
.............................................................................................TACAGTAGTATGCACATTGGTT...................................................... 22 1 3 1.67 5 5
.............................................................................................CACAGTAGTCTGCACATTGGTTA..................................................... 23 1 3 1.67 5 5
.............................................................................................TACAGTAGTGTGCACATTGGT....................................................... 21 1 3 1.67 5 5
.............................................................................................TACAGTAGTGTGCACATTGATT...................................................... 22 2 3 1.67 5 5
..............................................................................................ACAGTAGTCTGCGCATTGGTTAA.................................................... 23 2 3 1.67 5 5
..............................................................................................ACAGAAGTCTGCACATTGGTT...................................................... 21 1 3 1.67 5 5
..............................................................................................ACAGTAGTCTGCACATCGGTTA..................................................... 22 1 3 1.67 5 5
.............................................................................................TACAGTAGTCTGCACATTGGAT...................................................... 22 1 3 1.67 5 5
..............................................................................................ACAGTAGTCCGCACATTGGGT...................................................... 21 2 3 1.67 5 5
.............................................................................................TACAGTGGTATGCACATTGGTT...................................................... 22 2 3 1.67 5 5
.............................................................................................TACAGTAGTCTGCACATTGTTT...................................................... 22 1 3 1.67 5 5
...............................................................................................GAGTAGTCTGCACATTGGTT...................................................... 20 1 3 1.67 5 5
..............................................................................................ACAGTAGTCTGCACATTGGATAA.................................................... 23 2 3 1.67 5 5
..............................................................................................ACGGTAGTCTGCACATTGGTT...................................................... 21 1 3 1.67 5 5
..............................................................................................ACAGTAGTCGGCACATTGGATA..................................................... 22 2 4 1.50 6 6
..............................................................................................CCAGTAGTCTGCACATTGGTTATT................................................... 24 3 6 1.50 9 9
...............................................................................................CAGTAGTCTGCACATTGGTTAAT................................................... 23 2 4 1.50 6 6
.......................................................CCCAGTGTTGAGACTATCTGTTT........................................................................................... 23 2 2 1.50 3 3
...............................................................................................CAGTAGTCTGCACAGTGGTT...................................................... 20 1 4 1.50 6 6
.......................................................CCCAGTGTTAAGACTATCTATTC........................................................................................... 23 2 2 1.50 3 3
..............................................................................................ACAGTAGTCTGCACATTGGTCT..................................................... 22 2 4 1.50 6 6
..............................................................................................ACAGTAGTCTGCACATTGGGA...................................................... 21 2 7 1.43 10 10
..............................................................................................CCAGTAGTCTGCACATGGGTT...................................................... 21 2 5 1.40 7 7
..............................................................................................CCAGTAGTCTGCGCATTGGT....................................................... 20 2 5 1.40 7 7
...............................................................................................TAGTAGTCTGCACATTGGTT...................................................... 20 1 3 1.33 4 4
..............................................................................................CCAGTAGTCTGCACATTGGTTAG.................................................... 23 1 3 1.33 4 4
..............................................................................................ACAGTAGTCTTCACATTGGTT...................................................... 21 1 3 1.33 4 4
.............................................................................................AACAGTAGTCTGCACATTGGTT...................................................... 22 1 3 1.33 4 4
...............................................................................................CAGTAGGCTGCACATTGGTT...................................................... 20 1 3 1.33 4 4
..............................................................................................ACAGTAGTCTGCATATTGGTT...................................................... 21 1 3 1.33 4 4
...............................................................................................CAGTAGACTGCACATTGGT....................................................... 19 1 3 1.33 4 4
............................................................................................CTACAGTAGTCTGCACATTGGTT...................................................... 23 1 3 1.33 4 4
..............................................................................................ACAGTAGTCGGCACATTGGCTA..................................................... 22 2 3 1.33 4 4
..............................................................................................ACAGTAGTCTGCACATTGGTTTG.................................................... 23 1 3 1.33 4 4
..............................................................................................ACAGCAGTCTGCACATTGGTT...................................................... 21 1 3 1.33 4 4
..............................................................................................ACAGTAGTCTGCACATAGGTTA..................................................... 22 1 3 1.33 4 4
...............................................................................................CAGTAGTCTGCACATTGGTC...................................................... 20 1 3 1.33 4 4
..............................................................................................ACAGTAGTCTGCACGTAGGTT...................................................... 21 2 3 1.33 4 4
..............................................................................................ACAGTAGTCTGCACATCGGT....................................................... 20 1 3 1.33 4 4
..............................................................................................ACAGTAGTCGGCACATTGGGTA..................................................... 22 2 3 1.33 4 4
.......................................................CCCAGTGTTCAGACTATCTGT............................................................................................. 21 1 3 1.33 4 4
..............................................................................................TCAGTAGTCTGCACATTGGTTA..................................................... 22 1 3 1.33 4 4
.............................................................................................TACAGTAGTCTGCACATTGGAAA..................................................... 23 2 3 1.33 4 4
.............................................................................................TACAGTAGTCTGCAGAGTGGTT...................................................... 22 2 3 1.33 4 4
..............................................................................................ACAGTAGTCTGTACATTGGT....................................................... 20 1 3 1.33 4 4
..............................................................................................ACAGTAGTCTGCACATTGGTTCT.................................................... 23 2 3 1.33 4 4
..............................................................................................ACAGTAGTCTGCACGTTGGTTAA.................................................... 23 2 3 1.33 4 4
.............................................................................................TACAGTAGTGTGCACATTGGTA...................................................... 22 2 3 1.33 4 4
.............................................................................................TGCAGTAGTCTGCACATTGGTT...................................................... 22 1 3 1.33 4 4
.............................................................................................TACAGTAGTCTGCACATTGGTGT..................................................... 23 2 3 1.33 4 4
..............................................................................................AAAGTAGTCTGCACATTGGTT...................................................... 21 1 3 1.33 4 4
.............................................................................................GACAGTAGTCTGCACATTGGTT...................................................... 22 1 3 1.33 4 4
..............................................................................................ACAGTAGTCCGCACATTGGAT...................................................... 21 2 4 1.25 5 5
...............................................................................................CAGTAGTCTGCACATTGGTAT..................................................... 21 2 8 1.25 10 10
..............................................................................................ACAGTAGTCAGCACATTGGATA..................................................... 22 2 4 1.25 5 5
.............................................................................................TACAGTAGTCTGCACAATGGT....................................................... 21 1 4 1.00 4 4
..............................................................................................ACAGTAGTCCGCACATTGGT....................................................... 20 1 3 1.00 3 3
.............................................................................................TACAGTAGTCTGTACATTGGTA...................................................... 22 2 3 1.00 3 3
.............................................................................................TACAGTAGTCTGCACTTTGGTT...................................................... 22 1 3 1.00 3 3
.......................................................TCCAGTGTTTAGACTATCTGTT............................................................................................ 22 1 1 1.00 1 1
.............................................................................................TACAGTCGTATGCACATTGGTT...................................................... 22 2 3 1.00 3 3
...........................................................GTGTTTAGACTATCTGTTCC.......................................................................................... 20 1 1 1.00 1 1
.......................................................CCCAGTGTTTAGACTATCTGTTCTT......................................................................................... 25 2 1 1.00 1 1
..............................................................................................AGAGTAGTCTGCACATTGGTTAA.................................................... 23 2 3 1.00 3 3
.......................................................CGCAGTGTTTAGACTATCTGT............................................................................................. 21 1 1 1.00 1 1
..............................................................................................ACAGTAATCTGCACATTGGCT...................................................... 21 2 3 1.00 3 3
.......................................................CCCAGTGTTTAGACGATCTGTCCT.......................................................................................... 24 3 1 1.00 1 1
..............................................................................................ACAGTAGTCCGCACATTGGCT...................................................... 21 2 4 1.00 4 4
.......................................................ACCAGTGTTTAGACTATCTGTTC........................................................................................... 23 1 1 1.00 1 1
.......................................................CCCAGTGTTTAGACTATCTGTTCAGGACG..................................................................................... 29 1 1 1.00 1 1
.......................................................CCCAGTGTTTAGACAATCTGTTC........................................................................................... 23 1 1 1.00 1 1
.......................................................CCCAGTGTTTACACTATCTGTT............................................................................................ 22 1 1 1.00 1 1
..............................................................................................ACAGTAGTCTCCACATTGGTT...................................................... 21 1 3 1.00 3 3
.......................................................CCCAGTGTTTAGGCTATCTGTGC........................................................................................... 23 2 1 1.00 1 1
.......................................................CCCAGTATTTAGACTATCTGTT............................................................................................ 22 1 1 1.00 1 1
.......................................................CCCAGTGTTTAGACTAGCTGTTCA.......................................................................................... 24 1 1 1.00 1 1
.......................................................CCCAGTGTTTAGACTATCTGTCA........................................................................................... 23 2 1 1.00 1 1
.......................................................GCCAGTGTTTAGACTATCTGTTA........................................................................................... 23 2 1 1.00 1 1
.......................................................CCCAGTGTTTAGACTATCTGTTCAGGACTCC................................................................................... 31 0 1 1.00 1 1
................................................................................................AGTAGTCTGCACATTGGT....................................................... 18 0 3 1.00 3 3
..............................................................................................ACAGGAGTCTGCACATTGGTT...................................................... 21 1 3 1.00 3 3
...............................................................................................CAGTAGTCTGCAGATTGGTTAA.................................................... 22 2 3 1.00 3 3
.......................................................CCCAGTGTTTAGACTTTCTGT............................................................................................. 21 1 1 1.00 1 1

Anti-sense strand reads

GGCTACCTGTCTGTGACGACGGACCTACCTGGTCTCCTGTGGAGGTGAGGCAGATGGGTCACAAATCTGATAGACAAGTCCTGAGGGTTTAACATGTCATCAGACGTGTAACCAATCCGACCCGACCCAATCTGGGAGCCGCGGCGGCGACCTCTCGACCTGGCTGGGG

***************************************..(((((((.(((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).))))).))).))))..**************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:57 AM