ID:

eca-mir-199a

 Coordinate:

chr5:8104732-8104810 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.1 -40.1 -40.1
mature

  1. eca-mir-199a  chr5:8104741-8104761 -
  2. chr7:49327271-49327291 +
  3. eca-mir-199b  chr25:31553696-31553716 -
star

  1. eca-mir-199a  chr5:8104778-8104800 -
  2. chr7:49327230-49327252 +

Sense Strand Reads

AAGACCGGGAGAGGATTTTAAGTACCTAGATGGAAGCTTCTGGAGATCCTGCTCCGTCGCCCCAGTGTTCAGACTACCTGTTCAGGACAATGCCGTTGTACAGTAGTCTGCACATTGGTTAGACTGGGCAAGGGAGAGCAGCGCCATGGACAGCTGGAGACAGAGTTGCTGTTCCCAAG

*********************************************.((((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).)))).******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...................................................................................................ACAGTAGTCTGCACATTGGTT........................................................... 21 0 3 7864.00 23592 23592
............................................................CCCAGTGTTCAGACTACCTGTTC................................................................................................ 23 0 2 2125.50 4251 4251
..................................................................................................TACAGTAGTCTGCACATTGGTT........................................................... 22 0 3 1947.00 5841 5841
...................................................................................................ACAGTAGTCTGCACATTGGT............................................................ 20 0 3 1793.67 5381 5381
...................................................................................................ACAGTAGTCTGCACATTGGTTA.......................................................... 22 0 3 1524.67 4574 4574
............................................................CCCAGTGTTCAGACTACCTGTT................................................................................................. 22 0 2 1370.50 2741 2741
............................................................CCCAGTGTTCAGACTACCTGTTCT............................................................................................... 24 1 2 882.00 1764 1764
............................................................CCCAGTGTTCAGACTACCTGT.................................................................................................. 21 0 2 795.50 1591 1591
..................................................................................................TACAGTAGTCTGCACATTGGT............................................................ 21 0 3 758.00 2274 2274
....................................................................................................CAGTAGTCTGCACATTGGTT........................................................... 20 0 3 747.00 2241 2241
...................................................................................................ACAGTAGTCTGCACATTGGTA........................................................... 21 1 3 555.33 1666 1666
............................................................CCCAGTGTTCAGACTACCTGTTT................................................................................................ 23 1 2 517.00 1034 1034
...................................................................................................CCAGTAGTCTGCACATTGGTT........................................................... 21 1 3 492.00 1476 1476
...................................................................................................ACAGTAGTCTGCACATTGGTTAA......................................................... 23 1 3 455.67 1367 1367
............................................................CCCAGTGTTCAGACTACCTGTTA................................................................................................ 23 1 2 400.00 800 800
............................................................CCCAGTGTTCAGACTACCTG................................................................................................... 20 0 2 342.50 685 685
..................................................................................................TACAGTAGTCTGCACATTGGTA........................................................... 22 1 3 302.00 906 906
...................................................................................................ACAGTAGTCTGCACATTGGTTAT......................................................... 23 1 3 259.33 778 778
....................................................................................................CAGTAGTCTGCACATTGGTTA.......................................................... 21 0 3 224.00 672 672
....................................................................................................CAGTAGTCTGCACATTGGT............................................................ 19 0 3 180.00 540 540
...................................................................................................ACAGTAGTCTGCACATTGGTTT.......................................................... 22 1 3 142.67 428 428
....................................................................................................CAGTAGTCTGCACATTGGTTAA......................................................... 22 1 3 141.00 423 423
...................................................................................................ACAGTAGTCTGCACATTGG............................................................. 19 0 3 137.67 413 413
............................................................CCCAGTGTTCAGACTACCTGTA................................................................................................. 22 1 2 118.50 237 237
...................................................................................................CCAGTAGTCTGCACATTGGTTA.......................................................... 22 1 3 106.67 320 320
...................................................................................................ACAGTAGTCTGCACATTGGTAA.......................................................... 22 1 3 88.67 266 266
....................................................................................................CAGTAGTCTGCACATTGGTTAT......................................................... 22 1 3 88.00 264 264
............................................................CCCAGTGTTCAGACTACCT.................................................................................................... 19 0 2 84.50 169 169
..................................................................................................TACAGTAGTCTGCACATTGGTTA.......................................................... 23 0 3 84.00 252 252
...................................................................................................CCAGTAGTCTGCACATTGGT............................................................ 20 1 4 77.50 310 310
...................................................................................................ACAGTAGTCTGCACATTGGTTAAA........................................................ 24 1 1 73.00 73 73
............................................................CCCAGTGTTCAGACTACCTGTTCA............................................................................................... 24 0 2 68.50 137 137
....................................................................................................CAGTAGTCTGCACATTGGTTAAA........................................................ 23 1 1 62.00 62 62
...................................................................................................ACAGTAGTCTGCACAT................................................................ 16 0 3 61.67 185 185
...................................................................................................ACAGTAGTCTGCACATTGGGT........................................................... 21 1 3 58.67 176 176
..................................................................................................TACAGTAGTCTGCACATTGG............................................................. 20 0 3 56.00 168 168
..................................................................................................TACAGTAGTCTGCACATTGGTTT.......................................................... 23 1 3 53.00 159 159
...................................................................................................ACAGTAGTCTGCACATTGGTTG.......................................................... 22 1 3 47.00 141 141
...................................................................................................ACAGTAGTCTGCACATTGGTTATT........................................................ 24 2 3 44.67 134 134
............................................................CCCAGTGTTCAGACTACC..................................................................................................... 18 0 2 44.00 88 88
...................................................................................................ACAGTAGTCTGGACATTGGTT........................................................... 21 1 3 43.33 130 130
....................................................................................................CAGTAGTCTGCACATTGGTA........................................................... 20 1 4 37.25 149 149
...................................................................................................ACAGTAGTCTGCACATTGGAT........................................................... 21 1 3 34.67 104 104
............................................................CCCAGTGTTCAGACTACCTGA.................................................................................................. 21 1 2 34.00 68 68
...................................................................................................ACAGTAGTCTGCGCATTGGTT........................................................... 21 1 3 33.67 101 101
....................................................................................................CAGTAGTCTGCACATTGGTTATT........................................................ 23 2 3 30.67 92 92
............................................................CCCAGTGTTCAGACTACCTGTTG................................................................................................ 23 1 2 27.50 55 55
...................................................................................................ACAGTAGTCTGCACATGGGTT........................................................... 21 1 3 27.00 81 81
....................................................................................................CAGTAGTCTGCACATTGGTTATA........................................................ 23 1 1 26.00 26 26
...................................................................................................ACAGTAGTCTGCACATTGGTTATA........................................................ 24 1 1 24.00 24 24
.............................................................................................CCGTGGACAGTAGTCTGCACATTGGTT........................................................... 27 3 2 23.00 46 46
...................................................................................................CCAGTAGTCTGCACATTGGTTAA......................................................... 23 2 5 21.40 107 107
...................................................................................................ACAGTAGTCTGCACATTGGA............................................................ 20 1 3 18.33 55 55
...................................................................................................ACAGTAGTCTGCACATTGGCT........................................................... 21 1 3 18.00 54 54
....................................................................................................CAGTAGTCTGCACATTGGTTT.......................................................... 21 1 3 17.67 53 53
...................................................................................................ACAGTAGTCGGCACATTGGTT........................................................... 21 1 3 16.67 50 50
..................................................................................................TACAGTAGTCTGCACATTGGTG........................................................... 22 1 3 16.33 49 49
...............................................................AGTGTTCAGACTACCTGTTC................................................................................................ 20 0 2 16.00 32 32
............................................................................................CCCGTGGACAGTAGTCTGCACATTGGTT........................................................... 28 3 1 16.00 16 16
...................................................................................................ACAGTAGTCTGCACGTTGGTT........................................................... 21 1 3 15.33 46 46
...................................................................................................ACAGTAGTCTGCACATTGGTTAGA........................................................ 24 0 1 15.00 15 15
...................................................................................................ACAGTAGTCGGCACATTGGGT........................................................... 21 2 3 14.67 44 44
..................................................................................................TACAGTAGTCTGCACAT................................................................ 17 0 3 14.33 43 43
...................................................................................................ACAGTAGTCTGCACATTGGG............................................................ 20 1 3 14.33 43 43
...................................................................................................ACAGTAGTCTGAACATTGGTT........................................................... 21 1 3 14.00 42 42
...................................................................................................CCAGTAGTCTGCACATTGGTTAT......................................................... 23 2 3 13.33 40 40
............................................................CCCAGTGTTCAGACTACCTGTGC................................................................................................ 23 1 2 12.50 25 25
............................................................CCCAGTGTTCAGACT........................................................................................................ 15 0 14 11.93 167 167
..............................................................CAGTGTTCAGACTACCTGTTC................................................................................................ 21 0 2 11.50 23 23
..................................................................................................TACAGTAGTCTGCACATTGGTTAT......................................................... 24 1 3 11.00 33 33
...................................................................................................ACAGTAGTCTGCACATTGGTTAG......................................................... 23 0 3 10.67 32 32
...................................................................................................ACAGTAGTCTGCACATTGGGTA.......................................................... 22 1 3 10.33 31 31
...................................................................................................ACAGTAGTCTGCACATTGGTTGA......................................................... 23 2 3 10.00 30 30
............................................................CCCAGTGTTCAGACTACCTGTG................................................................................................. 22 1 2 10.00 20 20
..................................................................................................TACAGTAGTCTGCACATTGGTAA.......................................................... 23 1 3 10.00 30 30
....................................................................................................CAGTAGTCTGCACATTGG............................................................. 18 0 3 10.00 30 30
...................................................................................................ACAGTAGTCTGCACATTGGTTC.......................................................... 22 1 3 9.67 29 29
...................................................................................................ACAGTAGTCTGCACATTGGTAT.......................................................... 22 2 4 9.50 38 38
..................................................................................................TACAGTAGTCTGCACATTGGTC........................................................... 22 1 3 9.00 27 27
...................................................................................................ACAGTAGTCTGCACATTGGATA.......................................................... 22 1 3 9.00 27 27
............................................................CCCAGTGTTCAGGCTACCTGTTC................................................................................................ 23 1 2 8.50 17 17
...................................................................................................ACAGTAGTCTGCACATTGGTAC.......................................................... 22 2 3 8.33 25 25
..................................................................................................CACAGTAGTCTGCACATTGGTT........................................................... 22 1 3 8.33 25 25
...................................................................................................ACAGTAGTCTGGACATTGGT............................................................ 20 1 3 8.33 25 25
..................................................................................................TACAGTAGTCTGCACATTGATT........................................................... 22 1 3 8.33 25 25
............................................................CCCAGTGTTCAGACTA....................................................................................................... 16 0 3 8.33 25 25
...................................................................................................ACAGTAGTCTGCACATTGGTTAAAA....................................................... 25 2 1 8.00 8 8
............................................................CCCAGTGTTCAGACTAGCTGTTC................................................................................................ 23 1 2 8.00 16 16
...................................................................................................ACAGTAGTCTGCACATAGGTT........................................................... 21 1 3 8.00 24 24
..................................................................................................TACAGTAGTCTGCACATTGGTTG.......................................................... 23 1 3 8.00 24 24
............................................................CCCAGTGTTCAGACTACCTATTC................................................................................................ 23 1 2 8.00 16 16
...................................................................................................ACAGTAGTCTGCACATCGGTT........................................................... 21 1 3 7.67 23 23
..................................................................................................TACAGTAGTCTGGACATTGGTT........................................................... 22 1 3 7.67 23 23
...................................................................................................ACAGTAGTCTGCACATTGGTAAA......................................................... 23 2 4 7.50 30 30
..................................................................................................TACAGTAGTCTGCACATTGGTAT.......................................................... 23 2 3 7.33 22 22
............................................................CCCAGTGTTCAGACTACCTGTTCG............................................................................................... 24 1 2 7.00 14 14
...................................................................................................CCAGTAGTCTGCACATTGGTTAAA........................................................ 24 2 1 7.00 7 7
...................................................................................................ACAGTAGTCTGGACATTGGTTA.......................................................... 22 1 3 7.00 21 21
...................................................................................................ACAGTAGTCTGCACATTGGTTTT......................................................... 23 2 3 7.00 21 21
...................................................................................................ACAGTAGTCTGCGCATTGGT............................................................ 20 1 3 6.67 20 20
....................................................................................................CAGTAGTCTGCACATTGGTAA.......................................................... 21 1 4 6.50 26 26
..................................................................................................TACAGTAGTCTGCACATTGGA............................................................ 21 1 3 6.33 19 19
...................................................................................................ACAGTAGTCTGCACATTGGTG........................................................... 21 1 3 6.33 19 19
...................................................................................................ACAGTAGTCTGCACGTGGGTT........................................................... 21 2 4 6.25 25 25
..................................................................................................TACAGTAGTCTGCACATTGGTTAAA........................................................ 25 1 1 6.00 6 6
...................................................................................................ACAGTAGTCTGCACATGGGTTA.......................................................... 22 1 3 6.00 18 18
...................................................................................................CCAGTAGTCTGCACATTGGTTT.......................................................... 22 2 4 6.00 24 24
...............................................................AGTGTTCAGACTACCTGTT................................................................................................. 19 0 2 6.00 12 12
............................................................CCCAGTGTTCAGACGACCTGTT................................................................................................. 22 1 2 6.00 12 12
....................................................................................................CAGTAGTCTGCACATTGGTG........................................................... 20 1 3 5.67 17 17
............................................................CCCAGTGTTCAGACTAGCTGTTCT............................................................................................... 24 2 2 5.50 11 11
............................................................CCCAGTGTTCAGGCTACCTGTTCT............................................................................................... 24 2 2 5.50 11 11
...................................................................................................ACAGTAGTCTGCACATTGGCTA.......................................................... 22 1 3 5.33 16 16
...................................................................................................ACAGTAGTCAGCACATTGGTT........................................................... 21 1 3 5.33 16 16
...................................................................................AGGACAATGCCGTTGTACAGTAGTCTGCACATTGGTTA.......................................................... 38 0 1 5.00 5 5
............................................................CCCAGTGTTCAGACTACCTT................................................................................................... 20 1 2 5.00 10 10
............................................................CCCAGTGTTCAGGCTACCTGTT................................................................................................. 22 1 2 5.00 10 10
...................................................................................................ACAGTAGTCTGCACATTGGTTAAAAA...................................................... 26 3 1 5.00 5 5
............................................................CCCAGTGTTCAGACTACCTGTCC................................................................................................ 23 1 2 5.00 10 10
..................................................................................................TACAGTAGTCTGCACAGTGGTT........................................................... 22 1 3 5.00 15 15
...................................................................................................ACAGTAGTCGGCACATTGGAT........................................................... 21 2 6 5.00 30 30
............................................................CCCAGTGTTCAGACTAC...................................................................................................... 17 0 2 5.00 10 10
...................................................................................................ACAGTAGTCTGCACATTGGTTGT......................................................... 23 2 3 5.00 15 15
...................................................................................................CCAGTAGTCTGCACATTGG............................................................. 19 1 4 5.00 20 20
............................................................CCCAGTGTTCAGACTAACTGTTC................................................................................................ 23 1 2 5.00 10 10
..................................................................................................TACAGTAGTCTGCACATTGGTTGT......................................................... 24 2 3 5.00 15 15
...................................................................................................ACAGTAGTCTGCACATTGT............................................................. 19 1 4 4.75 19 19
....................................................................................................CAGTAGTCTGCACAT................................................................ 15 0 4 4.75 19 19
..................................................................................................TACAGTAGTCTGAACATTGGTT........................................................... 22 1 3 4.67 14 14
...................................................................................................ACAGTAGTCTGTACATTGGTT........................................................... 21 1 3 4.67 14 14
...................................................................................................TCAGTAGTCTGCACATTGGTT........................................................... 21 1 3 4.67 14 14
..................................................................................................TACAGTAGTCTGCACATTGGTTAA......................................................... 24 1 3 4.67 14 14
..................................................................................................TACAGTAGTGTGCACATTGGTT........................................................... 22 1 3 4.67 14 14
...................................................................................................ACAGTAGTCTGCACATTGGC............................................................ 20 1 3 4.67 14 14
............................................................CCCAGTGTTCAGACTACCTAT.................................................................................................. 21 1 2 4.50 9 9
............................................................CCCAGTGTTCAGACTACCTGTAC................................................................................................ 23 1 2 4.50 9 9
.............................................................................................CCGTGGACAGTAGTCTGCACATTGGTTA.......................................................... 28 3 2 4.50 9 9
............................................................CCCAGTGTTGAGACTACCTGTTC................................................................................................ 23 1 2 4.50 9 9
...................................................................................................ACAGTAGTCTGCACGTTGGTTA.......................................................... 22 1 3 4.33 13 13
...................................................................................................ACAGTAGTCTGCACATTGGAAA.......................................................... 22 2 3 4.33 13 13
...................................................................................................ACAGTAGTCTGCACATTGGTTAC......................................................... 23 1 3 4.33 13 13
...................................................................................................ACAGTAGTCAGCACATTGGAT........................................................... 21 2 5 4.20 21 21
............................................................CCCAGTGTTGAGACTACCTGT.................................................................................................. 21 1 2 4.00 8 8
............................................................CCCAGTGTTCAGACTAGCTGTT................................................................................................. 22 1 2 4.00 8 8
............................................................................................CCCGTGGACAGTAGTCTGCACATTGGTTA.......................................................... 29 3 1 4.00 4 4
............................................................CCCAGTGTTCAGACTACCTATT................................................................................................. 22 1 2 4.00 8 8
............................................................CCCAGTGTTCAGACTAACTGTTCT............................................................................................... 24 2 2 4.00 8 8
....................................................................................................CAGTAGTCTGCACATTGGTTAC......................................................... 22 1 3 4.00 12 12
............................................................CCCAGTGTTCAGACTACCTATTCT............................................................................................... 24 2 2 4.00 8 8
...................................................................................................ACAGTAGTCTGCGCATTGGTTA.......................................................... 22 1 3 4.00 12 12
...................................................................................................ACAGTAGTCTGCACATTGGTAAAA........................................................ 24 2 1 4.00 4 4
..................................................................................................TACAGTAGTCTGCACATTGAT............................................................ 21 1 3 4.00 12 12
............................................................TCCAGTGTTCAGACTACCTGTTC................................................................................................ 23 1 2 4.00 8 8
...................................................................................................GCAGTAGTCTGCACATTGGTT........................................................... 21 1 3 4.00 12 12
...................................................................................................ACAGTAGTCTGCACATGGGT............................................................ 20 1 4 4.00 16 16
............................................................CCCAGTGTTCAGACTAACTGT.................................................................................................. 21 1 2 4.00 8 8
............................................................CCCAGTGTTCAGACTACCTATTA................................................................................................ 23 2 2 4.00 8 8
...................................................................................................ACAGTAGTCTGAACATTGGTTA.......................................................... 22 1 3 4.00 12 12
..................................................................................................TACAGTAGTCTGAACATTGGT............................................................ 21 1 3 4.00 12 12
...................................................................................................ACAGTAGTCAGCACATTGGGT........................................................... 21 2 4 3.75 15 15
..................................................................................................TACAGTAGTCTGCACAGTGGT............................................................ 21 1 3 3.67 11 11
...................................................................................................ACAGTAGTCTGCCCATTGGTT........................................................... 21 1 3 3.67 11 11
...................................................................................................CCAGTAGTCTGCACATTGGTTG.......................................................... 22 2 3 3.67 11 11
..................................................................................................TACAGTAGTCTGCAGATTGGTT........................................................... 22 1 3 3.67 11 11
............................................................CCCAGTGTTCAGACTACCTGTGCT............................................................................................... 24 2 2 3.50 7 7
............................................................CCCAGTGTTGAGACTACCTGTTCT............................................................................................... 24 2 2 3.50 7 7
............................................................CCCAGTGTTCAGGCTACCTGT.................................................................................................. 21 1 2 3.50 7 7
............................................................CCCAGTGTTAAGACTACCTGTTC................................................................................................ 23 1 2 3.50 7 7
............................................................CCCAGTGTTCAAACTACCTGTTC................................................................................................ 23 1 2 3.50 7 7
............................................................CCCAGTGTTCAGACTACCTGTAT................................................................................................ 23 2 2 3.50 7 7
............................................................TCCAGTGTTCAGACTACCTGTT................................................................................................. 22 1 2 3.50 7 7
...................................................................................................ACAGTAGTCTGCACGTTGGT............................................................ 20 1 3 3.33 10 10
..................................................................................................TACAGTAGTCTGCACATTGCTT........................................................... 22 1 3 3.33 10 10
..................................................................................................TACAGTGGTGTGCACATTGGTT........................................................... 22 2 3 3.33 10 10
...................................................................................................ACAGTAGTCTGCACATTGGTTAAT........................................................ 24 2 3 3.33 10 10
...................................................................................................AGAGTAGTCTGCACATTGGTT........................................................... 21 1 3 3.33 10 10
...................................................................................................ACAGTAGTCTGGACATTGGTTAA......................................................... 23 2 3 3.33 10 10
...................................................................................................ACAGTAGTCTGCACATTGGGTAA......................................................... 23 2 3 3.33 10 10
....................................................................................................CAGTAGTCTGCAGATTGGTT........................................................... 20 1 3 3.33 10 10
...................................................................................................ACAGTAGTCGGCACATTGGCT........................................................... 21 2 3 3.33 10 10
...................................................................................................ACAGTAGTCTACACATTGGTT........................................................... 21 1 3 3.33 10 10
...................................................................................................CCAGTAGTCTGCGCATTGGTT........................................................... 21 2 4 3.25 13 13
...................................................................................................ACAGTAATCTGCACATTGGTT........................................................... 21 1 3 3.00 9 9
..................................................................................................TACAGTAGTCTGCACATTGT............................................................. 20 1 4 3.00 12 12
............................................................CCCAGTGTTCGGACTACCTGTT................................................................................................. 22 1 2 3.00 6 6
..................................................................................................TACAGTAGTCTGCACATTGGTGA.......................................................... 23 1 3 3.00 9 9
...................................................................................................ACAGTAGTCTGCACATTGGTGA.......................................................... 22 1 3 3.00 9 9
............................................................CCCAGTGTTCAGACTACCTGTAA................................................................................................ 23 2 2 3.00 6 6
............................................................ACCAGTGTTCAGACTACCTGTTC................................................................................................ 23 1 2 3.00 6 6
...................................................................................AGGACAATGCCGTTGTACAGTAGTCTGCACATTGGTT........................................................... 37 0 1 3.00 3 3
............................................................CCCAGTGTTCAGACTAACTGTTA................................................................................................ 23 2 2 3.00 6 6
....................................................................................................CAGTAGTCTGCACATTGGTTAG......................................................... 22 0 3 3.00 9 9
.....................................................................................................AGTAGTCTGCACATTGGTT........................................................... 19 0 3 3.00 9 9
..........................................................................................TCCCGTGGTACAGTAGTCTGCACATTGGTT........................................................... 30 2 1 3.00 3 3
............................................................CCCAGTGTTCAGACTACCTGTGT................................................................................................ 23 2 3 3.00 9 9
............................................................CCCAGTGTTCAGACTACCTGTTAT............................................................................................... 24 2 2 3.00 6 6
............................................................CCCAGTGTTCAGACTACCTGTTCAGGAC........................................................................................... 28 0 1 3.00 3 3
....................................................................................................CAGTAGTCTGCAAATTGGTT........................................................... 20 1 3 3.00 9 9
............................................................CCCAGTGTTCGGACTACCTGTTC................................................................................................ 23 1 2 3.00 6 6
............................................................................................CCGTTGGACAGTAGTCTGCACATTGGTT........................................................... 28 1 1 3.00 3 3
..................................................................................................TACAGTAGTCTGCACATTGGTAC.......................................................... 23 2 3 3.00 9 9
............................................................CCCAGTGTTCAGACTACA..................................................................................................... 18 1 4 2.75 11 11
....................................................................................................CAGTAGTCTGCACATTGGTGA.......................................................... 21 1 3 2.67 8 8
...................................................................................................ACAGTAGTCGGCACATTGGTTA.......................................................... 22 1 3 2.67 8 8
....................................................................................................CAGTAGTCTGCACATTGGTTAGT........................................................ 23 1 3 2.67 8 8
..................................................................................................TACAGTAGTCTGGACATTGGT............................................................ 21 1 3 2.67 8 8
...................................................................................................ACAGTAGTCGGCACATTGGT............................................................ 20 1 3 2.67 8 8
...................................................................................................ACAGTACTCTGCACATTGGTT........................................................... 21 1 3 2.67 8 8
..................................................................................................TACAGTAGTCTGCACATTGGAA........................................................... 22 2 3 2.67 8 8
...................................................................................................ACAGTAGTCTGCACATTGGTTTA......................................................... 23 2 3 2.67 8 8
...................................................................................................ACAGTAGTCTGAACATTGGT............................................................ 20 1 3 2.67 8 8
............................................................CCCAGTGTTCAGACTACCTCTT................................................................................................. 22 1 2 2.50 5 5
............................................................CCCAGTGTTCAGACTACCTATTT................................................................................................ 23 2 2 2.50 5 5
............................................................CCCAGTGTTCAGACTACCTTTTC................................................................................................ 23 1 2 2.50 5 5
............................................................CCCAGTGTTCAGGCTACCTGTA................................................................................................. 22 2 2 2.50 5 5
............................................................CCCAGTGTTCAGACTACCTGTGA................................................................................................ 23 2 2 2.50 5 5
............................................................CCCAGTGTTCAGACTACCTGTC................................................................................................. 22 1 2 2.50 5 5
............................................................CCCAGTGTTCAGACTACCTGTACT............................................................................................... 24 2 2 2.50 5 5
............................................................CCCAGTGTTGAGACTACCTGTT................................................................................................. 22 1 2 2.50 5 5
............................................................CCCAGTGTTAAGACTACCTGTTCT............................................................................................... 24 2 2 2.50 5 5
............................................................CCCAGTGTTCAGACTAACTGTT................................................................................................. 22 1 2 2.50 5 5
.............................................................CCAGTGTTCAGACTACCTGTTC................................................................................................ 22 0 2 2.50 5 5
............................................................CCCAGTGTTCAGACTACCTGTTTT............................................................................................... 24 2 2 2.50 5 5
............................................................CCCAGTGTTCAGACTAGCTGTTT................................................................................................ 23 2 2 2.50 5 5
............................................................CCCAGTGTTCAGACTACCTTT.................................................................................................. 21 1 2 2.50 5 5
...................................................................................................ACAGTAGTCTGCACATTGGAA........................................................... 21 2 7 2.43 17 17
...................................................................................................CCAGTAGTCTGCACGTTGGTT........................................................... 21 2 5 2.40 12 12
...................................................................................................ACAGTAGTCTGGACATTGGTA........................................................... 21 2 5 2.40 12 12
..................................................................................................TACAGTAGTCGGCACATTGGTT........................................................... 22 1 3 2.33 7 7
...................................................................................................ACAGTAGTCTGCACATTGGTC........................................................... 21 1 3 2.33 7 7
..................................................................................................TACAGTAGTCTGCACATTGGTTATT........................................................ 25 2 3 2.33 7 7
...................................................................................................ACAGTAGTCTGCACATTGGGTAT......................................................... 23 2 3 2.33 7 7
...................................................................................................ATAGTAGTCTGCACATTGGTT........................................................... 21 1 3 2.33 7 7
............................................................CCCAGTGTTGAGACTACCTGTTT................................................................................................ 23 2 3 2.33 7 7
....................................................................................................CAGTAGTCTGCGCATTGGTT........................................................... 20 1 3 2.33 7 7
..................................................................................................TACAGTAGTCTGCACAATGGTT........................................................... 22 1 3 2.33 7 7
...................................................................................................ACAGTAGTCTGCGCATTGGTA........................................................... 21 2 3 2.33 7 7
............................................................CCCAGTGTTAAGACTACCTGTT................................................................................................. 22 1 2 2.00 4 4
...................................................................................................ACAGTAGTCGGCACATTGGG............................................................ 20 2 5 2.00 10 10
...................................................................................................ACAGTAGTCTGCACATTG.............................................................. 18 0 3 2.00 6 6
...................................................................................................CCAGTAGTCTGGACATTGGTT........................................................... 21 2 3 2.00 6 6
............................................................CCAAGTGTTCAGACTACCTGTT................................................................................................. 22 1 2 2.00 4 4
...................................................................................................ACAGTAGTCTGCACATTGGCTAA......................................................... 23 2 3 2.00 6 6
....................................................................................................CAGTAGTCTGCAAATTGGTTA.......................................................... 21 1 3 2.00 6 6
...................................................................................................ACAGTAGTCAGCACATTGGGTA.......................................................... 22 2 3 2.00 6 6
...................................................................................................ACAGTAGTCTGCACATTGGTTTTA........................................................ 24 2 1 2.00 2 2
...................................................................................................ACAGTAGTCTGCACATTGGTTAAAC....................................................... 25 1 1 2.00 2 2
............................................................CCCAGTGTTCAGACTACCTGTTCAGGACA.......................................................................................... 29 0 1 2.00 2 2
...................................................................................................ACAGTAGTCTGCACATTGGGTT.......................................................... 22 2 3 2.00 6 6
............................................................CCCAGTGTTCAGACTACCTGAA................................................................................................. 22 2 4 2.00 8 8
...................................................................................................ACAGTAGTCTGCTCATTGGTT........................................................... 21 1 3 2.00 6 6
...................................................................................................ACAGTAGTCTGCACATTGGTTTAA........................................................ 24 2 1 2.00 2 2
............................................................CACAGTGTTCAGACTACCTGTTC................................................................................................ 23 1 2 2.00 4 4
...................................................................................................ACAGTAGTCCGCACATTGGTT........................................................... 21 1 3 2.00 6 6
...................................................................................................ACAGTAGTCTGCACTTTGGTT........................................................... 21 1 3 2.00 6 6
..................................................................................................TACAGTAGTCTGCACATTGCT............................................................ 21 1 3 2.00 6 6
..............................................................CAGTGTTCAGACTACCTGTT................................................................................................. 20 0 2 2.00 4 4
..................................................................................................TACAGTAGTCTGCACATTGGTTGA......................................................... 24 2 3 2.00 6 6
....................................................................................................CAGTAGTCTGCACATTGGTTAAAA....................................................... 24 2 1 2.00 2 2
...................................................................................................ACAGTAGTCTGCACATTGGTAATA........................................................ 24 2 1 2.00 2 2
.....................................................................................................AGTAGTCTGCACATTGGTTAA......................................................... 21 1 3 2.00 6 6
...................................................................................................ACAGTAGTCTGCACATGGGTA........................................................... 21 2 7 2.00 14 14
..................................................................................................TACAGTAGTCTGCACATTGGTTATA........................................................ 25 1 1 2.00 2 2
............................................................CCCAGTGTTCAGACTACCTCTTC................................................................................................ 23 1 2 2.00 4 4
.....................................................................................................AGTAGTCTGCACATTGGTTATT........................................................ 22 2 3 2.00 6 6
..................................................................................................TACAGTAGTATGCACATTGATT........................................................... 22 2 4 2.00 8 8
...................................................................................................ACAGTAGTCAGCACATTGGCT........................................................... 21 2 4 2.00 8 8
............................................................CCCAGTGTTGAGACTACCTATTC................................................................................................ 23 2 2 2.00 4 4
............................................................CCCAGTGTTCAGGCTACCTGTTT................................................................................................ 23 2 2 2.00 4 4
..................................................................................................TACAGTAGTCTGCACATTGGG............................................................ 21 1 3 2.00 6 6
...................................................................................................ACAGTAATCGGCACATTGGTT........................................................... 21 2 4 1.75 7 7
...................................................................................................ACAGTAGTCTGGACATTGG............................................................. 19 1 4 1.75 7 7
....................................................................................................GAGTAGTCTGCACATTGGTT........................................................... 20 1 3 1.67 5 5
..................................................................................................TACAGTAGTCTGCACATTGGAT........................................................... 22 1 3 1.67 5 5
...................................................................................................ACAGTAGTCTGCACATTGGTTAGT........................................................ 24 1 3 1.67 5 5
...................................................................................................ACAGTAGTCTGCACATCGGTTA.......................................................... 22 1 3 1.67 5 5
...................................................................................................ACAGTAGTCCGCACATTGGGT........................................................... 21 2 3 1.67 5 5
...................................................................................................ACAGAAGTCTGCACATTGGTT........................................................... 21 1 3 1.67 5 5
..................................................................................................CACAGTAGTCTGCACATTGGTTA.......................................................... 23 1 3 1.67 5 5
...................................................................................................ACAGTAGTCTGCACATAGGT............................................................ 20 1 3 1.67 5 5
..................................................................................................TACAGTAGTATGCACATTGGTT........................................................... 22 1 3 1.67 5 5
...................................................................................................ACAGTAGTCTGCACATTGGATAA......................................................... 23 2 3 1.67 5 5
..................................................................................................TACAGTAGTCTGCACATTGTTT........................................................... 22 1 3 1.67 5 5
...................................................................................................ACAGTAGTCTGCGCATTGGTTAA......................................................... 23 2 3 1.67 5 5
...................................................................................................ACGGTAGTCTGCACATTGGTT........................................................... 21 1 3 1.67 5 5
..................................................................................................TACAGTAGTGTGCACATTGGT............................................................ 21 1 3 1.67 5 5
..................................................................................................TACAGTAGTGTGCACATTGATT........................................................... 22 2 3 1.67 5 5
..................................................................................................TACAGTGGTATGCACATTGGTT........................................................... 22 2 3 1.67 5 5
............................................................CCCAGTTTTCAGACTACCTGTTC................................................................................................ 23 1 2 1.50 3 3
............................................................CCCAGTGTTCAGACTACCTCT.................................................................................................. 21 1 2 1.50 3 3
............................................................CCCAGTGTTCAGACGACCTGTTC................................................................................................ 23 1 2 1.50 3 3
............................................................CCCAGTGTTAAGACTACCTGT.................................................................................................. 21 1 2 1.50 3 3
............................................................CCCAGTGTTCAGCCTACCTGTTC................................................................................................ 23 1 2 1.50 3 3
............................................................CGCAGTGTTCAGACTACCTGTTC................................................................................................ 23 1 2 1.50 3 3
............................................................CCCAGTATTGAGACTACCTGTTC................................................................................................ 23 2 2 1.50 3 3
............................................................CCCAGTGTTCAGACGACCTGT.................................................................................................. 21 1 2 1.50 3 3
....................................................................................................CAGTAGTCTGCACAGTGGTT........................................................... 20 1 4 1.50 6 6
............................................................CCCAGTGTTCATACTACCTGTTC................................................................................................ 23 1 2 1.50 3 3
............................................................CCCAGTGTTGAGACTACCTATT................................................................................................. 22 2 2 1.50 3 3
....................................................................................................CAGTAGTCTGCACATTGGTTAAT........................................................ 23 2 4 1.50 6 6
............................................................CCCAGTGTTCGGACTACCTGTTCT............................................................................................... 24 2 2 1.50 3 3

Anti-sense strand reads

TTCTGGCCCTCTCCTAAAATTCATGGATCTACCTTCGAAGACCTCTAGGACGAGGCAGCGGGGTCACAAGTCTGATGGACAAGTCCTGTTACGGCAACATGTCATCAGACGTGTAACCAATCTGACCCGTTCCCTCTCGTCGCGGTACCTGTCGACCTCTGTCTCAACGACAAGGGTTC

********************************************.((((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).)))).********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:04 PM