ID:

eca-mir-1911

 Coordinate:

chrX:90827278-90827416 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-50.2 -50.0 -49.9

Sense Strand Reads

CTTTCACTCTATCTGCTGGTCATCCATCATCTCCCATTGGGCATCCATCATCTGCCACTGGGCATCCATCATCATTCGCTGGGCATTTGCTGAGTACCGCCATGTCTGTTGGGCATCCACAGTCTCCCACCAGCCATTGTGGTCTCTGCTGGTGCTCTGCCATTTCACCACCAGTGCCTTCCATGAGAATGCTGCTTACCTGTCTTGGGTGCTGTCATCTGATGCTGCCAAACCTACAA

***********************************..((((((..(((..(((......((((((............((.(((((((.((.(((.(((((.(((.(((.((((............)))).))).))).)))))))).)).))))))).)).............))))))......)))))).))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
..........................................................................................TGAGTACCGCCATGTCTGTTGGGT............................................................................................................................. 24 1 1 4.00 4 4
...............................................................................................................................CACCAGCCATTGTGGTCTCTGCA......................................................................................... 23 1 1 1.00 1 1
..........................................................................................TGAGTACCGCCATGTCTGT.................................................................................................................................. 19 0 1 1.00 1 1
..........................................................................................TGAGTACCGCCATGTCTGTGGGGT............................................................................................................................. 24 2 1 1.00 1 1
..........................................................................................TGAGTACCGTCATGTCTGTA................................................................................................................................. 20 2 5 0.20 1 1
....................................................................................................CATTTCGGTTGGGCAACCACA...................................................................................................................... 21 3 15 0.07 1 1

Anti-sense strand reads

GAAAGTGAGATAGACGACCAGTAGGTAGTAGAGGGTAACCCGTAGGTAGTAGACGGTGACCCGTAGGTAGTAGTAAGCGACCCGTAAACGACTCATGGCGGTACAGACAACCCGTAGGTGTCAGAGGGTGGTCGGTAACACCAGAGACGACCACGAGACGGTAAAGTGGTGGTCACGGAAGGTACTCTTACGACGAATGGACAGAACCCACGACAGTAGACTACGACGGTTTGGATGTT

***********************************..((((((..(((..(((......((((((............((.(((((((.((.(((.(((((.(((.(((.((((............)))).))).))).)))))))).)).))))))).)).............))))))......)))))).))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:13 PM