ID:

eca-mir-16-1

 Coordinate:

chr5:15685330-15685410 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.1 -36.1 -36.1
mature

  1. eca-mir-16-1  chr5:15685339-15685360 +
  2. eca-mir-16-2  chr17:21138923-21138944 +
star

Sense Strand Reads

TAATTTCGTCATGAGATGATCATTTTATGTTTGGATGGACTGACATACTTGTTCCGCTCTAGCAGCACGTAAATATTGGCGTAGTGAAATAAATATTAAACACCAATATTATTGTGCTGCTTTAGCGTGGCAGGGATACAGCAACTATTTATGATGTTTGTATTTCCCTTTAAGATAACAT

********************************************...((((((.((((..(((((((((..((((((((.((.................)).))))))))..)))))))))..)))).))))))..********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...........................................................TAGCAGCACGTAAATATTGGCG.................................................................................................... 22 0 2 10372.00 20744 20744
...........................................................TAGCAGCACGTAAATATTGGC..................................................................................................... 21 0 2 826.00 1652 1652
...........................................................TAGCAGCACGTAAATATTGGCGT................................................................................................... 23 0 2 424.50 849 849
...........................................................TAGCAGCACGTAAATATTGGCA.................................................................................................... 22 1 2 103.50 207 207
...........................................................TAGCAGCACGTAAATATTGGCGA................................................................................................... 23 1 2 96.00 192 192
...........................................................TAGCAGCACGTAAATATTGGCT.................................................................................................... 22 1 2 55.50 111 111
......................................................CGTGGTAGCAGCACGTAAATATTGGCG.................................................................................................... 27 3 1 50.00 50 50
...........................................................TAGCAGCACGTAAATATTGACG.................................................................................................... 22 1 2 38.50 77 77
...........................................................TAGCAGAACGTAAATATTGGCG.................................................................................................... 22 1 2 38.00 76 76
...........................................................TAGCAGCACGTGAATATTGGCG.................................................................................................... 22 1 2 36.50 73 73
...........................................................TAGCAGCACGTAGATATTGGCG.................................................................................................... 22 1 2 36.50 73 73
...........................................................TAGCAGCACGTAAATATTGGCC.................................................................................................... 22 1 2 34.00 68 68
...........................................................TAGCAGCACGTAAATAGTGGCG.................................................................................................... 22 1 2 25.00 50 50
...........................................................TAGCAGGACGTAAATATTGGCG.................................................................................................... 22 1 2 21.50 43 43
.....................................................CCGTGGTAGCAGCACGTAAATATTGGCG.................................................................................................... 28 3 1 20.00 20 20
...........................................................TAGCAGCACGTAAAGATTGGCG.................................................................................................... 22 1 2 20.00 40 40
...........................................................TAGCAGCACGTAAATATTGGCGTA.................................................................................................. 24 0 1 18.00 18 18
...........................................................TAGCAGCACGTAAATATTGGCGTAT................................................................................................. 25 1 1 15.00 15 15
...........................................................TAGCAGCACGGAAATATTGGCG.................................................................................................... 22 1 2 14.00 28 28
...........................................................TAGCAGCACGTAAATATTGCCG.................................................................................................... 22 1 2 13.00 26 26
..........................................................CTAGCAGCACGTAAATATTGGCG.................................................................................................... 23 0 1 13.00 13 13
...........................................................TAGCAGCACGTAAATAATGGCG.................................................................................................... 22 1 2 13.00 26 26
............................................................AGCAGCACGTAAATATTGGCG.................................................................................................... 21 0 2 12.00 24 24
...........................................................TAGCAGCACGTAAATATTGG...................................................................................................... 20 0 2 11.50 23 23
...........................................................TAGCAGCACGTAAATACTGGCG.................................................................................................... 22 1 2 11.00 22 22
...........................................................TAGCAGCACGTAAATATTGTCG.................................................................................................... 22 1 2 9.50 19 19
...........................................................TAGCAGCACGTAAATATTGGCGTAC................................................................................................. 25 1 1 9.00 9 9
...........................................................TAGCAGCACGTAAATATTGGCGC................................................................................................... 23 1 2 8.00 16 16
...........................................................TAGCAGCACGTAAAGAGTGGCG.................................................................................................... 22 2 2 8.00 16 16
.....................................................................................................ACCAATATTATTGTGCTGCT............................................................ 20 0 1 8.00 8 8
...........................................................TAGCAGCACGAAAATATTGGCG.................................................................................................... 22 1 2 8.00 16 16
...........................................................TAGCAGCACATAAATATTGGCG.................................................................................................... 22 1 2 7.50 15 15
...........................................................TAGCAGCACGTAAATAT......................................................................................................... 17 0 2 7.50 15 15
......................................................CGTGGTAGCAGCACGTAAATATTGGC..................................................................................................... 26 3 1 7.00 7 7
...........................................................GAGCAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 7.00 14 14
...........................................................TGGCAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 6.00 12 12
...........................................................TAGCAGCACGTAGATATTGGC..................................................................................................... 21 1 2 6.00 12 12
...........................................................TAGCAGCACGTAAATATTGGCGGA.................................................................................................. 24 1 1 6.00 6 6
...........................................................TAGCAGCACGTAAATATTGAC..................................................................................................... 21 1 2 5.00 10 10
...........................................................TAGCAGCACGTAAATATTG....................................................................................................... 19 0 2 5.00 10 10
...........................................................TAGCAGGACATAAATATTGGCG.................................................................................................... 22 2 2 5.00 10 10
...........................................................TAGCAGCACGTAAAAATTGGCG.................................................................................................... 22 1 2 5.00 10 10
...........................................................TAGCAGCACGTACATATTGGCG.................................................................................................... 22 1 2 4.50 9 9
...........................................................TAGCAGCACGTCAATATTGGCG.................................................................................................... 22 1 2 4.00 8 8
...........................................................TAGCAGCACGTAAATATTGGA..................................................................................................... 21 1 2 4.00 8 8
...........................................................AAGCAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 4.00 8 8
...........................................................TAGCAGCACGTGAATATTGGC..................................................................................................... 21 1 2 4.00 8 8
...........................................................TAGCAGCACGTAAATATTGGCAT................................................................................................... 23 1 2 4.00 8 8
...........................................................TAGCAGCACGTAAATATTGGTG.................................................................................................... 22 1 2 3.50 7 7
...........................................................TAGCAGCACGTGAATATTGGCA.................................................................................................... 22 2 2 3.50 7 7
...........................................................TAGCAGAACGTAAATATTGGC..................................................................................................... 21 1 2 3.50 7 7
...........................................................TAGCAGTACGTAAATATTGGCG.................................................................................................... 22 1 2 3.50 7 7
...........................................................TAGCAGGACGTAAATATTGACG.................................................................................................... 22 2 2 3.50 7 7
......................................................................................................CCAATATTATTGTGCTGCTTTA......................................................... 22 0 1 3.00 3 3
...........................................................TAGCAGCACGTGAATATTGGCT.................................................................................................... 22 2 3 3.00 9 9
...........................................................TAGCAGCACGTAAATATTGGCGAC.................................................................................................. 24 2 2 3.00 6 6
...........................................................TAGCAGCACGTAAATATTGGCGTAGTGA.............................................................................................. 28 0 1 3.00 3 3
...........................................................TAGCAGCACATAAATATTGACG.................................................................................................... 22 2 3 3.00 9 9
...........................................................TAGCAGCACGTAAATATTGGCGTAGT................................................................................................ 26 0 1 3.00 3 3
...........................................................TAGCAGCACGTAAATATTGACGA................................................................................................... 23 2 2 2.50 5 5
...........................................................TAGCAGCACGTAAATATTGACGT................................................................................................... 23 1 2 2.50 5 5
...........................................................TAGCAGAACGTAAATATTGGCGT................................................................................................... 23 1 2 2.50 5 5
...........................................................TAGTAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 2.50 5 5
...........................................................TAGCAGCACGTAGATATTGGCGT................................................................................................... 23 1 2 2.50 5 5
...........................................................TAGCAGGACCTAAATATTGGCG.................................................................................................... 22 2 2 2.50 5 5
...........................................................TAGCAGCACGTAAGTATTGGCG.................................................................................................... 22 1 2 2.50 5 5
...........................................................TAGCAGCACGTAAACATTGGCG.................................................................................................... 22 1 2 2.50 5 5
...........................................................TAGCAGCACGCAAATATTGGCG.................................................................................................... 22 1 2 2.50 5 5
...........................................................TAGCAGCACGTAAAGAATGGCG.................................................................................................... 22 2 2 2.50 5 5
...........................................................TAGCAGCACGTAAATATTGGCAA................................................................................................... 23 2 4 2.25 9 9
......................................................CGTGGTAGCAGCACGTAAATATTGGCGT................................................................................................... 28 3 1 2.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGTAGA................................................................................................ 26 1 1 2.00 2 2
.....................................................................................................ACCAATATTATTGTGCTGCTTT.......................................................... 22 0 1 2.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGAA.................................................................................................. 24 1 1 2.00 2 2
...........................................................TAGCAGCACGTAAATATTGGG..................................................................................................... 21 1 2 2.00 4 4
...........................................................TAGCAGCACGTAAATAGTGGCGT................................................................................................... 23 1 2 2.00 4 4
.....................................................CCGTGGTAGCAGCACGTAAATATTGGC..................................................................................................... 27 3 1 2.00 2 2
...........................................................TAGCAGCACCTAAATATTGGCG.................................................................................................... 22 1 2 2.00 4 4
...........................................................TAGCAGCACATAAATATTGCCG.................................................................................................... 22 2 2 2.00 4 4
...........................................................TAGCAGCACGTAAATATTGGCAG................................................................................................... 23 2 2 2.00 4 4
...........................................................TAGCAGCACGTAAATATTGGCGGAT................................................................................................. 25 2 1 2.00 2 2
...........................................................TAGCAGCACGTATATATTGGCG.................................................................................................... 22 1 2 2.00 4 4
...........................................................TAGCAGCACGTAAATATTGGCGTGG................................................................................................. 25 1 1 2.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCTT................................................................................................... 23 1 2 2.00 4 4
...........................................................TAGCAGCACCTAAATATTGCCG.................................................................................................... 22 2 2 2.00 4 4
...........................................................TAGCAGCACGTAAATATTGGCGTAGACT.............................................................................................. 28 3 1 2.00 2 2
...........................................................TAGCAGCATGTAAATATTGGCG.................................................................................................... 22 1 2 2.00 4 4
...........................................................TAGCAGCACGTAAATTTTGGCG.................................................................................................... 22 1 2 2.00 4 4
...........................................................TAGCAGCACGGAAATATTGGC..................................................................................................... 21 1 4 1.75 7 7
...........................................................TAGCAGCACGTGAATATTGGCC.................................................................................................... 22 2 3 1.67 5 5
...........................................................TAGCAGCACCTAAATATTGACG.................................................................................................... 22 2 3 1.67 5 5
...........................................................TAGCAGCACGTAAAAAGTGGCG.................................................................................................... 22 2 2 1.50 3 3
...........................................................TAGCAGCACGTAAATATTGGCGG................................................................................................... 23 1 2 1.50 3 3
...........................................................TAGCAGCACGTAAATATTGGCGTTCT................................................................................................ 26 2 2 1.50 3 3
...........................................................TAGCAGCACGTAAATATTGA...................................................................................................... 20 1 2 1.50 3 3
...........................................................TAGCAGCACGTGAATATTGGCGT................................................................................................... 23 1 2 1.50 3 3
...........................................................TAGCGGCACGTAAATATTGGCG.................................................................................................... 22 1 2 1.50 3 3
...........................................................CAGCAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 1.50 3 3
...........................................................TAGCAGCACGTAAATAGTGGCC.................................................................................................... 22 2 2 1.50 3 3
...........................................................TAGCAGCACGTAAAAATTGGC..................................................................................................... 21 1 2 1.50 3 3
...........................................................TAGCAGGACGTAAATATTGGC..................................................................................................... 21 1 2 1.50 3 3
...........................................................TAGCCGCACGTAAATATTGGCG.................................................................................................... 22 1 2 1.50 3 3
...........................................................TAGCAGCACATAAATATTGGCGT................................................................................................... 23 1 2 1.50 3 3
...........................................................TAGCAGCACGTAAATAGTGGCA.................................................................................................... 22 2 2 1.50 3 3
...........................................................TAGCAGCACTTAAATATTGACG.................................................................................................... 22 2 2 1.50 3 3
...........................................................TAGCAGCACGTAAATATTGGCGTTG................................................................................................. 25 1 2 1.50 3 3
...........................................................TAGCAGCACGTAAAGATTGGC..................................................................................................... 21 1 2 1.50 3 3
...........................................................TAGCAGCACGTAAATATTGGAT.................................................................................................... 22 2 3 1.33 4 4
...........................................................TAGCAGAACATAAATATTGGCG.................................................................................................... 22 2 4 1.25 5 5
...........................................................TAGCAGCACGTAAATATTGGCGTAG................................................................................................. 25 0 1 1.00 1 1
.....................................................................................................ACCAATATTATTGTGCTGCTTTT......................................................... 23 1 1 1.00 1 1
.....................................................................................................CCCAATATTATTGTGCGGCTTT.......................................................... 22 2 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATAGGCG.................................................................................................... 22 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGACT................................................................................................. 25 3 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGCA.................................................................................................. 24 1 1 1.00 1 1
............................................................AGCAGCACGTAAATATTGGCGT................................................................................................... 22 0 2 1.00 2 2
...........................................................TAGCAGCACGTAAATAATGGC..................................................................................................... 21 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGAAT................................................................................................. 25 2 1 1.00 1 1
...........................................................TCGCAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 1.00 2 2
...........................................................TAGCAGCACGTTAATATTGGCG.................................................................................................... 22 1 2 1.00 2 2
..............................................................TAGCACGTAAATATTGGCG.................................................................................................... 19 1 2 1.00 2 2
...........................................................TAGCAGCACGTGAATATTGGCGTAC................................................................................................. 25 2 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATTGGCGTAA................................................................................................. 25 1 2 1.00 2 2
...........................................................TAGCTGCACGTAAATATTGGCG.................................................................................................... 22 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGTAAT................................................................................................ 26 1 1 1.00 1 1
...........................................................TAGCAGCACGTAGATATTGGCGA................................................................................................... 23 2 2 1.00 2 2
...........................................................TAGCAGCACGTGAATATTGGCGA................................................................................................... 23 2 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGGG.................................................................................................... 22 1 2 1.00 2 2
......................................................................................................CCAATATTATTGTGCTGCTTT.......................................................... 21 0 1 1.00 1 1
...........................................................TAGCAGAACGTAAATATTGGCGA................................................................................................... 23 2 2 1.00 2 2
...........................................................TAGCAGCACGTAAAGAGTGGC..................................................................................................... 21 2 2 1.00 2 2
...........................................................TAGCAGCACGTAAAAATTGGCGT................................................................................................... 23 1 2 1.00 2 2
............................................................AGCAGCACGTAAATATTGGCA.................................................................................................... 21 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGAA.................................................................................................... 22 2 2 1.00 2 2
...........................................................TAGCAGCACGCAAATATTGGCGT................................................................................................... 23 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATACTGGC..................................................................................................... 21 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAAAATTGGCA.................................................................................................... 22 2 2 1.00 2 2
...........................................................TAGCAGCACTTAAATATTGGCG.................................................................................................... 22 1 2 1.00 2 2
......................................................................................................CCAATATTATTGTGCTGCT............................................................ 19 0 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATTAGC..................................................................................................... 21 1 2 1.00 2 2
......................................................CGATCTAGCAGCACGTAAATATTGGCG.................................................................................................... 27 1 1 1.00 1 1
...........................................................TAGCAGCACGTAAAGAGTGGCGT................................................................................................... 23 2 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGAG.................................................................................................... 22 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGAAAT................................................................................................ 26 2 1 1.00 1 1
.....................................................................................................ACCAATATTATGGTGCTGCTT........................................................... 21 1 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATTGGCCT................................................................................................... 23 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGTAGTGAA............................................................................................. 29 0 1 1.00 1 1
...........................................................TAGCAGCACGTAAAGATTGGCC.................................................................................................... 22 2 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCCA................................................................................................... 23 2 2 1.00 2 2
...........................................................TAGCAGCACGTAGATATTGGCGTAT................................................................................................. 25 2 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATTGGCGGAAT................................................................................................ 26 2 1 1.00 1 1
.....................................................................................................ACCAATATTATTGTGCTGC............................................................. 19 0 1 1.00 1 1
...........................................................TAGCAACACGTAAATATTGGCG.................................................................................................... 22 1 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCGTAGTGAACTT.......................................................................................... 32 2 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATTGGCGTTTT................................................................................................ 26 2 2 1.00 2 2
...........................................................TAGCAGCACGTAGATATTGGCC.................................................................................................... 22 2 2 1.00 2 2
...........................................................TAGCAGCACGTAAATATTGGCTTAGTGAA............................................................................................. 29 1 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATTGGCGAAGA................................................................................................ 26 2 1 1.00 1 1
...........................................................TAGCAGCACGTAAATATTTGCG.................................................................................................... 22 1 2 1.00 2 2
...........................................................TAGCAGGACATAAATATTGACG.................................................................................................... 22 3 8 0.88 7 7
...........................................................TAGCAGCACGTAAAGAGTGGCC.................................................................................................... 22 3 4 0.75 3 3
...........................................................TAGCAGCACGTAGATATTGGCA.................................................................................................... 22 2 3 0.67 2 2
...........................................................TAGCAGCACGTAAATATTGCC..................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGT...................................................................................................... 20 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAACAGTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAGTATTGGCGT................................................................................................... 23 1 2 0.50 1 1
.............................................................GCAGCACGTAAATATTGGCG.................................................................................................... 20 0 2 0.50 1 1
...........................................................TAGCAGCACGGAAATATTGGCGA................................................................................................... 23 2 2 0.50 1 1
...........................................................TAGCAGCACATAAATATTGCCGT................................................................................................... 23 2 2 0.50 1 1
...........................................................TAGCAGTACATAAATATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCCCGTGAATATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TGGCAGCACGTAAATATTGGC..................................................................................................... 21 1 2 0.50 1 1
.....................................................................................................CCCAATATTATTGTGCTGCTTTT......................................................... 23 2 2 0.50 1 1
............................................................CGCAGCACGTAAATATTGGCG.................................................................................................... 21 1 2 0.50 1 1
...........................................................TTGCAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGCCT.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGGAAATATTGAC..................................................................................................... 21 2 4 0.50 2 2
............................................................AGCAGCACGTAAATATTGGCGA................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAAAACTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCACCACGTAAATATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGAACGTAAATATTGACG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGGACATAAATATTGGCGT................................................................................................... 23 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTAGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TGGCAGAACGTAAATATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCTCGTAAATATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACCTAAATATTGTCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACTTAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACGTCAATATTGGCC.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGGCGAG.................................................................................................. 24 2 2 0.50 1 1
...........................................................TAGCAGTACGTAAATATTGACG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGAACGTAAATATTGCCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACCTAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGGACTTAAATATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGGCATG.................................................................................................. 24 2 2 0.50 1 1
.............................................................GCAGCAAGTAAATATTGGCG.................................................................................................... 20 1 2 0.50 1 1
...........................................................TAGCAGCAAGTAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACCTAAATATTGCCGT................................................................................................... 23 2 2 0.50 1 1
...........................................................TGGCAGCACGTAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGGACGTAAATATTGAC..................................................................................................... 21 2 2 0.50 1 1
...........................................................TAGCAGCACGTATATATTGGC..................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCGGCACGTAAATATTGGC..................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCAGCACGTAGAGATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGGCGTTTTT............................................................................................... 27 3 2 0.50 1 1
...........................................................TAGCAGCACGTATATATTGGCT.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGAACCTAAATATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAACAGCACGTAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAACAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACGTATATATTGGCGA................................................................................................... 23 2 2 0.50 1 1
...........................................................TAGCAGCACGTATATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATCGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACGTCCATATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCCCGTAAATATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACGTCAATATTGGC..................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCAGGACGTAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATAATGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATAGTGGC..................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCAGCACGGAAATATTGGCGGAT................................................................................................. 25 3 2 0.50 1 1
...........................................................TAGCAGCACGTAGATATTGGCT.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCATCACGTAAATACTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGTAATTATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................GAGCAGCACGTAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGGATT................................................................................................... 23 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATAGTGGGG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACATAAATATTGGC..................................................................................................... 21 1 4 0.50 2 2
...........................................................TAGCAGCACGTAAAAAATGGC..................................................................................................... 21 2 2 0.50 1 1
...........................................................TAGAAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGGCGTCT................................................................................................. 25 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATACTGGCA.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGGCGATTT................................................................................................ 26 3 2 0.50 1 1
............................................................AGCAGCACGTAAATATTGGAG.................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCAGCACGTAGAAATTGGCG.................................................................................................... 22 2 2 0.50 1 1
...........................................................TAGCAGCACGTAGATATTGGA..................................................................................................... 21 2 2 0.50 1 1
...........................................................TAGCAGCACGAAAATATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGCCGA................................................................................................... 23 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGTCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGAACGTAAATATTGCC..................................................................................................... 21 2 2 0.50 1 1
..................................................................ACGTAAATATTGGCG.................................................................................................... 15 0 2 0.50 1 1
...........................................................TAGCAGCACGTAAATAGTGGCGA................................................................................................... 23 2 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGCG..................................................................................................... 21 2 2 0.50 1 1
...........................................................TATCAGCACGTAAATATTGGCG.................................................................................................... 22 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAAGATTGGCGT................................................................................................... 23 1 2 0.50 1 1
...........................................................TAGCAGCACGTACATATTGGC..................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCAGCACGTAAATATTGGCGAAA................................................................................................. 25 2 2 0.50 1 1
............................................................AGCAGCACGTAGATATTGGCG.................................................................................................... 21 1 2 0.50 1 1
...........................................................TAGCAGAACATAAATATTGACG.................................................................................................... 22 3 20 0.45 9 9
...........................................................TAGCAGAACGGAAATATTGGC..................................................................................................... 21 2 7 0.43 3 3
...........................................................TAGCAGCACGTGAATATTGG...................................................................................................... 20 1 3 0.33 1 1
...........................................................TAGCAGCACGAAAATATTGGC..................................................................................................... 21 1 3 0.33 1 1
...........................................................TAGCAGGACGTAAATATTGCC..................................................................................................... 21 2 3 0.33 1 1
...........................................................TAGCAGCACGTAAATATTGGCGAGAT................................................................................................ 26 3 3 0.33 1 1
...........................................................TAGCAGCACGTAAATATTGGAAAA.................................................................................................. 24 3 3 0.33 1 1
...........................................................TAGCAGAACGTAAATATTGAC..................................................................................................... 21 2 3 0.33 1 1
...........................................................TAGCAGGACCTAAATATTGACG.................................................................................................... 22 3 7 0.29 2 2
...........................................................TAGCAGGACCTAAATATTGCCG.................................................................................................... 22 3 7 0.29 2 2
...........................................................TAGCAGCACGTAAATATTGTG..................................................................................................... 21 2 4 0.25 1 1
...........................................................TAGCAGCACGTAAATAGTGGCAC................................................................................................... 23 3 4 0.25 1 1
...........................................................TAGCAGGACGGAAATATTGGC..................................................................................................... 21 2 5 0.20 1 1
...........................................................TAGCAGAACCTAAATATTGCCG.................................................................................................... 22 3 6 0.17 1 1
...........................................................TAGCAGCACGTAAAGAGTGGCA.................................................................................................... 22 3 6 0.17 1 1
...........................................................TAGCAGCACGTAAAGAGTGGCT.................................................................................................... 22 3 6 0.17 1 1
...........................................................TAGCAGAACATAAATATTGCCG.................................................................................................... 22 3 13 0.15 2 2
...........................................................TAGCAGGACGTAAATATTGACT.................................................................................................... 22 3 7 0.14 1 1
...........................................................TAGCAGCACGTAAATATTGGAAA................................................................................................... 23 3 7 0.14 1 1
...........................................................TAGCAGCACATAAATATTGAC..................................................................................................... 21 2 8 0.13 1 1
...........................................................TAGCAGTACATAAATATTGGC..................................................................................................... 21 2 8 0.13 1 1
...........................................................TAGCAGCACATAAATATTGCC..................................................................................................... 21 2 9 0.11 1 1
...........................................................TAGCAGTACATAAATATTGCCG.................................................................................................... 22 3 9 0.11 1 1
...........................................................TAGCAGAACCTAAATATTGACG.................................................................................................... 22 3 10 0.10 1 1
............................................................TAGAGCACGTAAATATTGGCG.................................................................................................... 21 3 11 0.09 1 1
...........................................................TAGCAGCACATAAATATTGC...................................................................................................... 20 2 17 0.06 1 1
...........................................................TAGCAGGACGGAAATATTGAC..................................................................................................... 21 3 20 0.05 1 1
...........................................................TAGCAGCACGTAAATATA........................................................................................................ 18 1 20 0.05 1 1

Anti-sense strand reads

ATTAAAGCAGTACTCTACTAGTAAAATACAAACCTACCTGACTGTATGAACAAGGCGAGATCGTCGTGCATTTATAACCGCATCACTTTATTTATAATTTGTGGTTATAATAACACGACGAAATCGCACCGTCCCTATGTCGTTGATAAATACTACAAACATAAAGGGAAATTCTATTGTA

*********************************************...((((((.((((..(((((((((..((((((((.((.................)).))))))))..)))))))))..)))).))))))..******************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:03 PM