ID:

eca-mir-153-2

 Coordinate:

chr6:8829305-8829373 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature

  1. eca-mir-153-1  chr4:107797724-107797745 -
  2. eca-mir-153-2  chr6:8829309-8829330 -
star

Sense Strand Reads

TggTTggTTgTgggTgggTggTgTgTgTTTgTTTgTgTgTgTgACAGCTGCCAGTGTCATTTTTGTGATCTGCAGCTAGTATTCTCGCTCCAGTTGCATAGTCACAAAAGTGATCATTGGCAGGTGTGGCCGCTTCATGGACAGGACAATCGGGACATGTGGGCCCAGA

***********************************.(((.((.(((.((((((((((((((((((((((.((((((((((......)))..)))))))..))))))))))))).))))))))).))).))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.............................................................................................TTGCATAGTCACAAAAGTGATC...................................................... 22 0 2 4.50 9 9

Anti-sense strand reads

AggAAggAAgAgggAgggAggAgAgAgAAAgAAAgAgAgAgAgTGTCGACGGTCACAGTAAAAACACTAGACGTCGATCATAAGAGCGAGGTCAACGTATCAGTGTTTTCACTAGTAACCGTCCACACCGGCGAAGTACCTGTCCTGTTAGCCCTGTACACCCGGGTCT

***********************************.(((.((.(((.((((((((((((((((((((((.((((((((((......)))..)))))))..))))))))))))).))))))))).))).))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
...................................................GTCAAAGTAAAGACCCTAGACGT............................................................................................... 23 3 14 0.07 1 1

Generated: 09/01/2015 at 12:04 PM