ID:

eca-mir-150

 Coordinate:

chr10:19329710-19329774 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-55.8 -55.5 -55.2

Sense Strand Reads

AGAGGCGGCGTCCGTCCGTGGAGGCAGCAGCGGCTCGTCTCTCCCCACGGCCCTGTCTCCCAACCCTTGTACCAGTGCTGTGCCTCGGTCCCTGGTACAGGCATGGGGGGCAGGGACCTGGGGGCACCAGCAGCGCCGGGCCGGAGGGGTGAAGCCCGAGGGGTG

***********************************......((((((.((((((((((((((..(((.(((((((.((((.....))))..))))))))))..)))))))))))).))))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR871532

testes
.......................................................TCTCCCAACCCTTGTACCAGTG........................................................................................ 22 0 1 327.00 327 327
.......................................................TCTCCCAACCCTTGTACCAGTGA....................................................................................... 23 1 1 160.00 160 160
.......................................................TCTCCCAACCCTTGTACCAGTGT....................................................................................... 23 1 1 114.00 114 114
.......................................................TCTCCCAACCCTTGTACCAGT......................................................................................... 21 0 1 90.00 90 90
.......................................................TCTCCCAACCCTTGTACCAGTGG....................................................................................... 23 1 1 42.00 42 42
.......................................................TCTCCCAACCCTTGTACCAG.......................................................................................... 20 0 1 15.00 15 15
.......................................................TCTCCCAACCCTTGTACCAGTGC....................................................................................... 23 0 1 6.00 6 6
.......................................................TCTCCCAACCCTTGTACCAGTA........................................................................................ 22 1 1 4.00 4 4
.......................................................TCTCCCAACCCTTGTAGCAGTG........................................................................................ 22 1 1 3.00 3 3
.......................................................TCTCCCAACCCTTGTACCAGA......................................................................................... 21 1 1 3.00 3 3
.......................................................TCTCCCAACCCTTGTACCAATG........................................................................................ 22 1 1 2.00 2 2
.......................................................TCTCCCAACCCTTGTACCAGTAA....................................................................................... 23 2 1 2.00 2 2
.......................................................TCTCCCAACCCTTGTAGCAGTGA....................................................................................... 23 2 1 2.00 2 2
.......................................................TCTCCCAACCCTGGTACCAGTG........................................................................................ 22 1 1 2.00 2 2
.......................................................TCTCCCAACCCTTGTACCAGGG........................................................................................ 22 1 1 2.00 2 2
.......................................................TCTCCCAACCCTTGTACCAGTTT....................................................................................... 23 2 2 1.50 3 3
........................................................CTCCCAACCCTTGTACCAGT......................................................................................... 20 0 1 1.00 1 1
.......................................................TCTCCCAACCCTTATACCAGTGT....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCTTTGTACCAGTGT....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCTTTGTACCAGTG........................................................................................ 22 1 1 1.00 1 1
.......................................................TCTCCCAACCGTTGTACCAGTG........................................................................................ 22 1 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCAGTGCG...................................................................................... 24 1 1 1.00 1 1
.......................................................TCTCCCAACCCTAGTACCAGTGT....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCAATGT....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTAC............................................................................................. 17 0 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTAGCAGTGG....................................................................................... 23 2 1 1.00 1 1
.....................................TCTCTCCCCACGGCCCTG.............................................................................................................. 18 0 1 1.00 1 1
.......................................................TCTCCCAACGCTTGTACCAGTG........................................................................................ 22 1 1 1.00 1 1
.......................................................TCTCCCAACGCTTGTACCAGTGC....................................................................................... 23 1 1 1.00 1 1
.......................................................TCTCCCAACCCTAGTACCAGTG........................................................................................ 22 1 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCAGTGAA...................................................................................... 24 2 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCAGTTA....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCCGTGTACCAGTT........................................................................................ 22 2 1 1.00 1 1
.......................................................TCTCCCAACACTTGTACCAGTG........................................................................................ 22 1 1 1.00 1 1
.......................................................TCTCCCGACCCTTGTACCAGTG........................................................................................ 22 1 1 1.00 1 1
..................................................CGATCTCTCCCAACCCTTGTACCAGTG........................................................................................ 27 3 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCAGGGA....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTAACAGT......................................................................................... 21 1 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCAGTC........................................................................................ 22 1 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCAGTGTA...................................................................................... 24 2 1 1.00 1 1
.......................................................TCTCCCAACCCTGGTACCAGT......................................................................................... 21 1 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCATTG........................................................................................ 22 1 1 1.00 1 1
.............................................................................CTGTGCCTCGGTCCCTGGTACAGGCATGGGGGGCA..................................................... 35 0 1 1.00 1 1
.......................................................TCTCCCAACCCTTGGACCAGTGG....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCATTGA....................................................................................... 23 2 1 1.00 1 1
.......................................................TCTCCCAACCCTTGTACCA........................................................................................... 19 0 1 1.00 1 1
.......................................................TCTACCAACCCTTGTACCAGTG........................................................................................ 22 1 2 0.50 1 1
.......................................................TCTCCCAACCCTTGTACCACTGA....................................................................................... 23 2 2 0.50 1 1
.......................................................TCTCCCAACCCTTGGAGCAGTG........................................................................................ 22 2 3 0.33 1 1
.......................................................TCTCCCAACCCATGTACCAGTA........................................................................................ 22 2 3 0.33 1 1
.......................................................TCTCCCAACCCTGGTACCAGTGA....................................................................................... 23 2 3 0.33 1 1
................................................................................................................GGGACCTGGGGGCACCA.................................... 17 0 3 0.33 1 1
.......................................................TCTCCCAACACTTGTACCAATGA....................................................................................... 23 3 7 0.14 1 1
.......................................................TCTCCCTACGCTTGTACCACTG........................................................................................ 22 3 10 0.10 1 1

Anti-sense strand reads

TCTCCGCCGCAGGCAGGCACCTCCGTCGTCGCCGAGCAGAGAGGGGTGCCGGGACAGAGGGTTGGGAACATGGTCACGACACGGAGCCAGGGACCATGTCCGTACCCCCCGTCCCTGGACCCCCGTGGTCGTCGCGGCCCGGCCTCCCCACTTCGGGCTCCCCAC

***********************************......((((((.((((((((((((((..(((.(((((((.((((.....))))..))))))))))..)))))))))))).))))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 11:33 AM